NO19G01380, NO19G01380 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO19G01380 vs. NCBI_GenBank
Match: EWM23636.1 (tp53rk-binding protein [Nannochloropsis gaditana]) HSP 1 Score: 132.1 bits (331), Expect = 2.500e-27 Identity = 66/99 (66.67%), Postives = 80/99 (80.81%), Query Frame = 0 Query: 32 EDTIYETVLFPQNHTLHILLYEDVVNASEIRTALLDGTLPEFALIKPSMVLSSFHILLAASTALLQLAQGTMRLKTLHAELLYSLSPTTNISEAFRVFG 131 E +++T LFP+ HTL +LL++DV NAS +R LL G P+FALI P M+ SSFH+LLAAS ALL QGTMR+KTLHAELLYSLSPTT+ISEAFR+FG Sbjct: 34 ESFVFKTTLFPEKHTLCLLLFQDVKNASAVRETLLAGNSPDFALINPDMIFSSFHLLLAASIALLHANQGTMRVKTLHAELLYSLSPTTSISEAFRIFG 132
BLAST of NO19G01380 vs. NCBI_GenBank
Match: XP_018408016.1 (PREDICTED: EKC/KEOPS complex subunit TPRKB isoform X1 [Nanorana parkeri]) HSP 1 Score: 77.4 bits (189), Expect = 7.200e-11 Identity = 41/95 (43.16%), Postives = 67/95 (70.53%), Query Frame = 0 Query: 36 YETVLFPQNHTLHILLYEDVVNASEIRTALLDGTLPEFALIKPSMVLSSFHILLAASTALLQLAQGTMRLKTLHAELLYSLSPTTNISEAFRVFG 131 Y LFP+ H + +LL++DV NAS +R +DGT+ + AL+ P+M++ +L+AA+ A+ G M+ ++L++E++++LSPT NISEAFR FG Sbjct: 5 YHLELFPE-HKVTLLLFKDVKNASGLRKKAIDGTI-DGALLNPAMIVDPLQVLVAANKAIHLHLMGKMKTRSLNSEIIFNLSPTNNISEAFRKFG 97
BLAST of NO19G01380 vs. NCBI_GenBank
Match: XP_024738393.1 (CGI-121-domain-containing protein [Meliniomyces bicolor E] >PMD61489.1 CGI-121-domain-containing protein [Meliniomyces bicolor E]) HSP 1 Score: 77.4 bits (189), Expect = 7.200e-11 Identity = 41/90 (45.56%), Postives = 60/90 (66.67%), Query Frame = 0 Query: 42 PQNHTLHILLYEDVVNASEIRTALLDG-TLPEFALIKPSMVLSSFHILLAASTALLQLAQGTMRLKTLHAELLYSLSPTTNISEAFRVFG 131 P +H +HI LY D+ NAS ++ LLDG T E+ALI +V+S H L AA A+ L + +R + +H+E+++SLSP NI+E+FR FG Sbjct: 13 PYSHEIHIALYRDITNASFLQQQLLDGNTNFEYALIDAGVVVSKIHALAAAYRAVSDLLENRLRSRNVHSEIVFSLSPNNNIAESFRRFG 102
BLAST of NO19G01380 vs. NCBI_GenBank
Match: XP_016343366.1 (PREDICTED: EKC/KEOPS complex subunit Tprkb-like [Sinocyclocheilus anshuiensis]) HSP 1 Score: 77.0 bits (188), Expect = 9.400e-11 Identity = 43/91 (47.25%), Postives = 69/91 (75.82%), Query Frame = 0 Query: 40 LFPQNHTLHILLYEDVVNASEIRTALLDGTLPEFALIKPSMVLSSFHILLAASTALLQLAQGTMRLKTLHAELLYSLSPTTNISEAFRVFG 131 LFP+ +T+ LL++DV NA+E+R ++G + + ALI PSMV+ +F IL+AA+ A+ G M+ ++L++E+++SLSPT+NISEAF+ FG Sbjct: 9 LFPE-YTVTQLLFKDVKNATELRKMAVNGEI-KGALINPSMVVDAFQILVAANKAIHLHKSGKMKTRSLYSEIIFSLSPTSNISEAFKRFG 97
BLAST of NO19G01380 vs. NCBI_GenBank
Match: XP_020606738.1 (EKC/KEOPS complex subunit Tprkb-like [Orbicella faveolata]) HSP 1 Score: 77.0 bits (188), Expect = 9.400e-11 Identity = 37/87 (42.53%), Postives = 61/87 (70.11%), Query Frame = 0 Query: 44 NHTLHILLYEDVVNASEIRTALLDGTLPEFALIKPSMVLSSFHILLAASTALLQLAQGTMRLKTLHAELLYSLSPTTNISEAFRVFG 131 N+T+++ L+ DV N+SE+R ++ G L E AL+ MV FH+++A A QG M+ +TLH+E++++LSP+TNI+E+F+ FG Sbjct: 29 NYTMNLALFTDVTNSSELRQLIVQGKL-EAALLNACMVTDPFHVVIAGHKAFQLFQQGKMKTRTLHSEIIFNLSPSTNINESFKKFG 114
BLAST of NO19G01380 vs. NCBI_GenBank
Match: XP_001896423.1 (1810034M08Rik protein [Brugia malayi]) HSP 1 Score: 76.3 bits (186), Expect = 1.600e-10 Identity = 43/88 (48.86%), Postives = 58/88 (65.91%), Query Frame = 0 Query: 43 QNHTLHILLYEDVVNASEIRTALLDGTLPEFALIKPSMVLSSFHILLAASTALLQLAQGTMRLKTLHAELLYSLSPTTNISEAFRVFG 131 Q + L+ DV NASE+R AL+DG++ + ALIKP +VL F +L AA+ A+ Q A + +TLHAEL+YSLSP NI E+ FG Sbjct: 20 QRRFFRVCLFTDVKNASELRQALVDGSI-DAALIKPELVLEVFTLLAAANKAVHQAAHNRLSARTLHAELIYSLSPDRNILESLLTFG 106
BLAST of NO19G01380 vs. NCBI_GenBank
Match: XP_003977580.1 (PREDICTED: EKC/KEOPS complex subunit TPRKB, partial [Takifugu rubripes]) HSP 1 Score: 76.3 bits (186), Expect = 1.600e-10 Identity = 42/95 (44.21%), Postives = 70/95 (73.68%), Query Frame = 0 Query: 36 YETVLFPQNHTLHILLYEDVVNASEIRTALLDGTLPEFALIKPSMVLSSFHILLAASTALLQLAQGTMRLKTLHAELLYSLSPTTNISEAFRVFG 131 ++ LFP +H + +L++DV NA+E+R + + G + ALIKP+MV++SF +L+AA+ A+ G M+ ++L++E+++SLSPT NISEAF+ FG Sbjct: 5 HQLELFP-DHRVTQVLFKDVKNAAELRQSAVAGKI-NAALIKPAMVVNSFQVLVAANKAVHLQKTGKMKTRSLYSEIIFSLSPTNNISEAFKRFG 97
BLAST of NO19G01380 vs. NCBI_GenBank
Match: NP_001140002.1 (EKC/KEOPS complex subunit TPRKB [Salmo salar] >ACM09187.1 TP53RK-binding protein [Salmo salar]) HSP 1 Score: 76.3 bits (186), Expect = 1.600e-10 Identity = 43/94 (45.74%), Postives = 68/94 (72.34%), Query Frame = 0 Query: 37 ETVLFPQNHTLHILLYEDVVNASEIRTALLDGTLPEFALIKPSMVLSSFHILLAASTALLQLAQGTMRLKTLHAELLYSLSPTTNISEAFRVFG 131 E LFP + T+ LL++DV NA+E+R ++G + ALI PSM++S F +L+AA+ A+ + G M+ ++L++E++Y+LSPT NISEAF+ FG Sbjct: 21 ELELFP-DRTVTQLLFKDVKNAAELRKNAMEGKI-NGALINPSMIVSPFQVLVAANKAVHLHSTGKMKTRSLYSEIIYNLSPTNNISEAFKRFG 112
BLAST of NO19G01380 vs. NCBI_GenBank
Match: CRZ22565.1 (Bm6162 [Brugia malayi]) HSP 1 Score: 76.3 bits (186), Expect = 1.600e-10 Identity = 43/88 (48.86%), Postives = 58/88 (65.91%), Query Frame = 0 Query: 43 QNHTLHILLYEDVVNASEIRTALLDGTLPEFALIKPSMVLSSFHILLAASTALLQLAQGTMRLKTLHAELLYSLSPTTNISEAFRVFG 131 Q + L+ DV NASE+R AL+DG++ + ALIKP +VL F +L AA+ A+ Q A + +TLHAEL+YSLSP NI E+ FG Sbjct: 32 QRRFFRVCLFTDVKNASELRQALVDGSI-DAALIKPELVLEVFTLLAAANKAVHQAAHNRLSARTLHAELIYSLSPDRNILESLLTFG 118
BLAST of NO19G01380 vs. NCBI_GenBank
Match: XP_016147271.1 (PREDICTED: EKC/KEOPS complex subunit Tprkb-like [Sinocyclocheilus grahami]) HSP 1 Score: 76.3 bits (186), Expect = 1.600e-10 Identity = 43/91 (47.25%), Postives = 68/91 (74.73%), Query Frame = 0 Query: 40 LFPQNHTLHILLYEDVVNASEIRTALLDGTLPEFALIKPSMVLSSFHILLAASTALLQLAQGTMRLKTLHAELLYSLSPTTNISEAFRVFG 131 LFP+ +T+ LL++DV NA+E+R ++G + + ALI PSMV+ +F IL+AA+ A+ G M+ ++L++E+++SLSPT NISEAF+ FG Sbjct: 9 LFPE-YTVTQLLFKDVKNATELRKMAVNGEI-KGALINPSMVVDAFQILVAANKAVHLHKSGKMKTRSLYSEIIFSLSPTNNISEAFKRFG 97 The following BLAST results are available for this feature:
BLAST of NO19G01380 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO19G01380 ID=NO19G01380|Name=NO19G01380|organism=Nannochloropsis oceanica|type=gene|length=1278bpback to top protein sequence of NO19G01380.1 >NO19G01380.1-protein ID=NO19G01380.1-protein|Name=NO19G01380.1|organism=Nannochloropsis oceanica|type=polypeptide|length=258bpback to top Synonyms
Publications
|