NO19G01350, NO19G01350 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO19G01350 vs. NCBI_GenBank
Match: EWM23638.1 (dihydrolipoamide succinyltransferase [Nannochloropsis gaditana]) HSP 1 Score: 537.7 bits (1384), Expect = 3.500e-149 Identity = 367/470 (78.09%), Postives = 392/470 (83.40%), Query Frame = 0 Query: 1 MLRRGVQSTSQGLQGSINAATKMAVGHTRNTFKSVPLVRLLHASSSPSSTHLLLRSTVNRIQHTFTQRDPFQFAVRAFSTPDGSNFLLNVPSMGDSITEGTIVNWQKREGDWVNADDVIVVLETDKVSVDVRAPRAGIVKEVIGAEGDTVGVGSPLAKIDTSAAKPEGASPEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAERLKSAQNTAAMLTTFQEVDMGNLMEMRAAYKEEFEKTHGVKLGFMSAFVKASTAALLELPAVNAFIDEGTKEIVYRNYCDVSVAVASPAGLVVPVLRNAESMSFAGVEKQIALYGKKAKEGQLALEDMAGGTFTISNGGVFGSLFGTPIINPPQSAILGMHATKMRAVVGRDGQVMARPMMYLALTYDHRLIDGREAVTFLKSVAAKIEDPRRMVLEL 471 MLRRG+ STS LQG+I AA A GH R T ++ P+ L+HA S+ + + L + I T R +RA S G +F+LNVPSMGDSITEGTIVNWQK+ GDWV+ADDVIVVLETDKVSVDVRAPR+GI+ EVIGAE DTVGVG PLAKIDT+A XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX AERLKSAQNTAAMLTTFQEVDMGNLM+MR AYKEEFEK HGVKLGFMSAFVKASTAAL E+PAVNAFID+GTKEIVYR+YCDVSVAVASPAGLVVPVLRNAE MSFAGVE+QIA+YGKKAKEG LALEDMAGGTFTISNGGVFGSL GTPIINPPQSAILGMHATKMRAVVG+DGQVMARPMMYLALTYDHRLIDGREAVTFLKSVAAKIEDPRRMVLEL Sbjct: 2 MLRRGLWSTSSRLQGNIRAAAGRA-GHIRLTTQAAPVTNLVHAFSNSTLSTLPHQGPCRPIPAWSTHR---SLPIRALSASAGQDFILNVPSMGDSITEGTIVNWQKKVGDWVDADDVIVVLETDKVSVDVRAPRSGIITEVIGAEDDTVGVGVPLAKIDTTA--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNRSETRVKMNRMRLRIAERLKSAQNTAAMLTTFQEVDMGNLMDMRKAYKEEFEKVHGVKLGFMSAFVKASTAALQEIPAVNAFIDDGTKEIVYRDYCDVSVAVASPAGLVVPVLRNAERMSFAGVERQIAMYGKKAKEGALALEDMAGGTFTISNGGVFGSLLGTPIINPPQSAILGMHATKMRAVVGKDGQVMARPMMYLALTYDHRLIDGREAVTFLKSVAAKIEDPRRMVLEL 465
BLAST of NO19G01350 vs. NCBI_GenBank
Match: XP_009037630.1 (hypothetical protein AURANDRAFT_71782 [Aureococcus anophagefferens] >EGB07632.1 hypothetical protein AURANDRAFT_71782 [Aureococcus anophagefferens]) HSP 1 Score: 404.4 bits (1038), Expect = 4.700e-109 Identity = 272/401 (67.83%), Postives = 301/401 (75.06%), Query Frame = 0 Query: 70 PFQFAVRAFSTPDGSNFLLNVPSMGDSITEGTIVNWQKREGDWVNADDVIVVLETDKVSVDVRAPRAGIVKEVIGAEGDTVGVGSPLAKIDTSAAKPEGASPEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAERLKSAQNTAAMLTTFQEVDMGNLMEMRAAYKEEFEKTHGVKLGFMSAFVKASTAALLELPAVNAFIDEGTKEIVYRNYCDVSVAVASPAGLVVPVLRNAESMSFAGVEKQIALYGKKAKEGQLALEDMAGGTFTISNGGVFGSLFGTPIINPPQSAILGMHATKMRAVVGRDGQVMARPMMYLALTYDHRLIDGREAVTFLKSVAAKIEDPRRMVLEL 471 P A R FS D + VPSMGDSITEGT+ W GD V DD++V++ETDKVSV+VRAP +G V E++ D V VG+PL KIDTS A XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX AERLK AQNTAA LTTFQE DMG LME+R A+K+EFEK HGVKLGFMSAFV AST AL+E+PAVNA+ID+ KEIVYR+YCDVSVAVASP GLVVPVLRN E+MSFA VEK I +G KA+ G LALEDMAGGTFTISNGGVFGSL GTPIINPPQSAILGMHATKMRAVV +DG V+ARPMMYLALTYDHR+IDGREAVTFLKSVA KIEDP R++L++ Sbjct: 419 PRAVAARCFSVED-----VPVPSMGDSITEGTVAEWSVEVGDTVAVDDIVVMIETDKVSVEVRAPVSGAVTELLAELDDVVEVGAPLFKIDTSVEVAAAA-------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAGSRGETRVKMNRMRQRIAERLKEAQNTAACLTTFQECDMGALMELRKAHKDEFEKVHGVKLGFMSAFVAASTKALIEIPAVNAYIDDDAKEIVYRDYCDVSVAVASPNGLVVPVLRNTEAMSFADVEKTIGAFGAKARAGALALEDMAGGTFTISNGGVFGSLMGTPIINPPQSAILGMHATKMRAVVAKDGSVVARPMMYLALTYDHRMIDGREAVTFLKSVANKIEDPARLLLDI 795
BLAST of NO19G01350 vs. NCBI_GenBank
Match: XP_002184355.1 (dihydrolipoamide succinyltransferase [Phaeodactylum tricornutum CCAP 1055/1] >EEC44104.1 dihydrolipoamide succinyltransferase [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 395.2 bits (1014), Expect = 2.800e-106 Identity = 277/379 (73.09%), Postives = 310/379 (81.79%), Query Frame = 0 Query: 93 MGDSITEGTIVNWQKREGDWVNADDVIVVLETDKVSVDVRAPRAGIVKEVIGAEGDTVGVGSPLAKIDTSAAKPEG-ASPEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAERLKSAQNTAAMLTTFQEVDMGNLMEMRAAYKEEFEKTHGVKLGFMSAFVKASTAALLELPAVNAFIDEGTKEIVYRNYCDVSVAVASPAGLVVPVLRNAESMSFAGVEKQIALYGKKAKEGQLALEDMAGGTFTISNGGVFGSLFGTPIINPPQSAILGMHATKMRAVVGRDGQVMARPMMYLALTYDHRLIDGREAVTFLKSVAAKIEDPRRMVLEL 471 MGDSI+EGTIV+ GD+VN DDV+VVLETDKVSVDVRAP AG + E++G D V VG+ L +IDT A PE +PE+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX A RLK AQNTAAMLTTFQEVDMGNLME+R YK+ F++ HGVKLGFMSAFVKA+TAAL E+PAVN +ID T+EIVYR + D+SVAVASP GLVVPVLRN E+MSFA VE+ IA YG+KAKEG L+L+DMAGGTFTISNGGVFGSL GTPIINPPQSAILGMHATKMRAVV G+V+ARPMMYLALTYDHRLIDGRE VTFLKS+A KI DP +++LE+ Sbjct: 1 MGDSISEGTIVDLPVAPGDFVNVDDVVVVLETDKVSVDVRAPEAGALVEILGEIDDVVEVGTNLFRIDTDADAPEAPVAPES--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFLGTRNERRTKMSRMRQRVAARLKDAQNTAAMLTTFQEVDMGNLMELRKRYKDVFQEKHGVKLGFMSAFVKATTAALQEIPAVNGYIDNDTQEIVYREFVDISVAVASPNGLVVPVLRNTETMSFADVERNIAAYGQKAKEGSLSLDDMAGGTFTISNGGVFGSLMGTPIINPPQSAILGMHATKMRAVVNEQGEVVARPMMYLALTYDHRLIDGREGVTFLKSIAEKIADPSKLLLEI 377
BLAST of NO19G01350 vs. NCBI_GenBank
Match: GAX15623.1 (2-oxoglutarate dehydrogenase E2 component [Fistulifera solaris]) HSP 1 Score: 391.3 bits (1004), Expect = 4.100e-105 Identity = 265/385 (68.83%), Postives = 297/385 (77.14%), Query Frame = 0 Query: 88 LNVPSMGDSITEGTIVNWQKREGDWVNADDVIVVLETDKVSVDVRAPRAGIVKEVIGAEGDTVGVGSPLAKIDTSAAKPEGAS-PEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAERLKSAQNTAAMLTTFQEVDMGNLMEMRAAYKEEFEKTHGVKLGFMSAFVKASTAALLELPAVNAFIDEGTKEIVYRNYCDVSVAVASPAGLVVPVLRNAESMSFAGVEKQIALYGKKAKEGQLALEDMAGGTFTISNGGVFGSLFGTPIINPPQSAILGMHATKMRAVVG-RDGQVMARPMMYLALTYDHRLIDGREAVTFLKSVAAKIEDPRRMVLEL 471 + VP+MGDSITEGTIV+ GD++ DDV+VVLETDKVSVDVRAP AG + EV+G D V VGS L +IDT A PE ++ P XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX A RLK AQNTAAMLTTFQE DMGNLMEMR YK+EF K H VKLGFMSAFVKA+TAAL ELPAVNA++D+ KEIVYR Y D+SVAVASPAGLVVPVLRN E+M FA VE+ IA+Y +KAK G L+L+DMAGGTFTISNGGVFGSL GTPI+NPPQSAILGMHATKMR VV + G ++ARPMMYLALTYDHRLIDGRE VTFLKS+A KI DP +++LE+ Sbjct: 45 IEVPTMGDSITEGTIVDIPVGPGDFLQVDDVVVVLETDKVSVDVRAPVAGALVEVLGEVDDVVEVGSALFRIDTDADAPESSTQPPVPEEVAHSIEEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQTLFLGQRTERRTKMSRMRQRVAARLKDAQNTAAMLTTFQECDMGNLMEMRNKYKDEFFKKHDVKLGFMSAFVKAATAALQELPAVNAYMDDENKEIVYREYVDISVAVASPAGLVVPVLRNTETMGFADVERNIAMYAEKAKNGTLSLDDMAGGTFTISNGGVFGSLMGTPILNPPQSAILGMHATKMRPVVDPKTGDIIARPMMYLALTYDHRLIDGREGVTFLKSIAEKISDPAKLLLEI 429
BLAST of NO19G01350 vs. NCBI_GenBank
Match: XP_002293235.1 (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >EED89696.1 predicted protein, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 388.3 bits (996), Expect = 3.500e-104 Identity = 263/381 (69.03%), Postives = 296/381 (77.69%), Query Frame = 0 Query: 90 VPSMGDSITEGTIVNWQKREGDWVNADDVIVVLETDKVSVDVRAPRAGIVKEVIGAEGDTVGVGSPLAKIDTSAAKPEGASPEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAERLKSAQNTAAMLTTFQEVDMGNLMEMRAAYKEEFEKTHGVKLGFMSAFVKASTAALLELPAVNAFIDEGTKEIVYRNYCDVSVAVASPAGLVVPVLRNAESMSFAGVEKQIALYGKKAKEGQLALEDMAGGTFTISNGGVFGSLFGTPIINPPQSAILGMHATKMRAVVGRDGQVMARPMMYLALTYDHRLIDGREAVTFLKSVAAKIEDPRRMVLEL 471 VP+MGDSITEGTIV+ GD+V+ DDV++VLETDKVSVDVRAP G V E++G D V VGS L ++DT KP + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX A RLK +QNTAAMLTTFQEVDMGN MEMR +K++F K HGVKLGFMS FVKA T+AL E+PA+NA+ID+ KEIVYR+YCD+SVAVASP GLVVPVLRN E M+FA VE+ IAL+G+KAK+G LA++DMAGGTFTISNGGVFGSL GTPIIN PQSAILGMHATKMRAVV G V+ARPMMYLALTYDHRLIDGRE VTFLKSVA KI DP R+V ++ Sbjct: 1 VPTMGDSITEGTIVDIPVAPGDYVSEDDVVLVLETDKVSVDVRAPEGGCVVEILGEVDDVVEVGSALYRLDTDGVKP---AEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPQLPQMESITTNLGNRPERRSKMSRMRQRVATRLKESQNTAAMLTTFQEVDMGNFMEMRHRHKDDFAKKHGVKLGFMSVFVKACTSALQEVPAINAYIDDEAKEIVYRDYCDISVAVASPNGLVVPVLRNTEFMTFADVERTIALFGQKAKDGTLAIDDMAGGTFTISNGGVFGSLMGTPIINQPQSAILGMHATKMRAVVDEKGNVVARPMMYLALTYDHRLIDGREGVTFLKSVADKITDPARLVFDI 378
BLAST of NO19G01350 vs. NCBI_GenBank
Match: GAX19151.1 (2-oxoglutarate dehydrogenase E2 component [Fistulifera solaris]) HSP 1 Score: 386.3 bits (991), Expect = 1.300e-103 Identity = 272/389 (69.92%), Postives = 304/389 (78.15%), Query Frame = 0 Query: 88 LNVPSMGDSITEGTIVNWQKREGDWVNADDVIVVLETDKVSVDVRAPRAGIVKEVIGAEGDTVGVGSPLAKIDTSAAKPEGA-----SPEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAERLKSAQNTAAMLTTFQEVDMGNLMEMRAAYKEEFEKTHGVKLGFMSAFVKASTAALLELPAVNAFIDEGTKEIVYRNYCDVSVAVASPAGLVVPVLRNAESMSFAGVEKQIALYGKKAKEGQLALEDMAGGTFTISNGGVFGSLFGTPIINPPQSAILGMHATKMRAVVG-RDGQVMARPMMYLALTYDHRLIDGREAVTFLKSVAAKIEDPRRMVLEL 471 + VP+MGDSITEGTIV+ GD++ DDV+VVLETDKVSVDVRAP AG + EV+G D V VGS L +IDT A PE + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX A RLK AQNTAAMLTTFQE DMGNLMEMR YK+EF K H VKLGFMSAFVKA+TAAL ELPAVNA++D+ KEIVYR Y D+SVAVASPAGLVVPVLRN E+M FA VE+ IA+Y +KAK G L+L+DMAGGTFTISNGGVFGSL GTPI+NPPQSAILGMHATKMR VV + G+++ARPMMYLALTYDHRLIDGRE VTFLKS+A KI DP +++LE+ Sbjct: 6 IEVPTMGDSITEGTIVDIPVGPGDFLQVDDVVVVLETDKVSVDVRAPVAGALVEVLGEVDDVVEVGSALFRIDTDADAPESSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISEQTLFLGQRTERRTKMSRMRQRVAARLKDAQNTAAMLTTFQECDMGNLMEMRNKYKDEFFKKHDVKLGFMSAFVKAATAALQELPAVNAYMDDENKEIVYREYVDISVAVASPAGLVVPVLRNTETMGFADVERNIAMYAEKAKNGTLSLDDMAGGTFTISNGGVFGSLMGTPILNPPQSAILGMHATKMRPVVDPKTGEIIARPMMYLALTYDHRLIDGREGVTFLKSIAEKISDPAKLLLEI 394
BLAST of NO19G01350 vs. NCBI_GenBank
Match: OQS05892.1 (dihydrolipoamide succinyltransferase, partial [Thraustotheca clavata]) HSP 1 Score: 357.8 bits (917), Expect = 5.000e-95 Identity = 226/388 (58.25%), Postives = 273/388 (70.36%), Query Frame = 0 Query: 83 GSNFLLNVPSMGDSITEGTIVNWQKREGDWVNADDVIVVLETDKVSVDVRAPRAGIVKEVIGAEGDTVGVGSPLAKIDTSAAKPEGASPEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAERLKSAQNTAAMLTTFQEVDMGNLMEMRAAYKEEFEKTHGVKLGFMSAFVKASTAALLELPAVNAFIDEGTKEIVYRNYCDVSVAVASPAGLVVPVLRNAESMSFAGVEKQIALYGKKAKEGQLALEDMAGGTFTISNGGVFGSLFGTPIINPPQSAILGMHATKMRAVVGRDGQVMARPMMYLALTYDHRLIDGREAVTFLKSVAAKIEDPRRMVLEL 471 G +NVPSMGDSI+EGT+V+W K GD V+ D+V++VLETDKVSVDVRAP+AG++++ + D V +G+PL + AA ASP XXXXXXXXXXXXXXXXXXXXXXXXXXXX AERLK +QN++A LTTFQEVDM LM MR YK+ FE H VKLGFMSAF+KAS ALLE+P VNA ID+ EI+YR++ D+SVAVA+P GLV PV+RN ESMSFA +EK +A +KA+ G++ +ED+AGGTFTISNGGVFGSL GTPIIN PQS ILGMHATKMR VV +G+++ARPMMYLALTYDHRL+DGREAVT LKS+A KI DP R++L+L Sbjct: 28 GEPITVNVPSMGDSISEGTVVSWTKNVGDHVDVDEVVLVLETDKVSVDVRAPQAGVIQKTLVNVDDVVEIGAPLFHLVPGAAP---ASP-----------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXENITAPVFAHGPSREVRREKMNRMRLRIAERLKESQNSSASLTTFQEVDMSKLMAMRKTYKDAFEAKHNVKLGFMSAFIKASANALLEVPGVNASIDDAHNEIIYRDFVDISVAVATPKGLVTPVIRNTESMSFADIEKSLAHLAEKARAGEITMEDLAGGTFTISNGGVFGSLMGTPIINVPQSGILGMHATKMRPVVLANGEIVARPMMYLALTYDHRLVDGREAVTALKSIADKIADPERLLLDL 389
BLAST of NO19G01350 vs. NCBI_GenBank
Match: XP_008613424.1 (2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase), variant [Saprolegnia diclina VS20] >EQC33301.1 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase), variant [Saprolegnia diclina VS20]) HSP 1 Score: 357.5 bits (916), Expect = 6.600e-95 Identity = 253/433 (58.43%), Postives = 298/433 (68.82%), Query Frame = 0 Query: 38 VRLLHASSSPSSTHLLLRSTVNRIQHTFTQRDPFQFAVRAFSTPDGSNFLLNVPSMGDSITEGTIVNWQKREGDWVNADDVIVVLETDKVSVDVRAPRAGIVKEVIGAEGDTVGVGSPLAKIDTSAAKPEGASPEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAERLKSAQNTAAMLTTFQEVDMGNLMEMRAAYKEEFEKTHGVKLGFMSAFVKASTAALLELPAVNAFIDEGTKEIVYRNYCDVSVAVASPAGLVVPVLRNAESMSFAGVEKQIALYGKKAKEGQLALEDMAGGTFTISNGGVFGSLFGTPIINPPQSAILGMHATKMRAVVGRDGQVMARPMMYLALTYDHRLIDGREAVTFLKSVAAKIEDPRRMVLEL 471 V L A+S ++ + +++ R+Q A R FST D + VPSMGDSI+EGT+V W K GD V ADDV+VVLETDKVSVDVRAP+AG++++ + D V +G+PL + AA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX AERLK +QNT+A LTTFQEVDM LM MR YK+ FE H VKLGFMSAF+KAS ALLE+P VNA IDE EIVYR++ D+SVAVA+P GLV PVLRN ESM FA +EK +A +KA+ G + +EDMAGGTFTISNGGVFGSL GTPIIN PQS ILGMHATKMR VV +G+++ARPMMYLALTYDHRL+DGREAVT LKS+A KI DP R++L+L Sbjct: 23 VPALSAASFNGASRAISMTSMGRVQVGAP-----NMARRMFSTID-----IPVPSMGDSISEGTVVEWVKAVGDRVEADDVVVVLETDKVSVDVRAPQAGVIQKTLVNVDDVVEIGAPLFHMVPGAA-----------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVMLGGASREVRREKMNRMRLRIAERLKESQNTSASLTTFQEVDMSKLMAMRKTYKDAFEAKHNVKLGFMSAFIKASANALLEVPGVNASIDEAHSEIVYRDFVDISVAVATPKGLVTPVLRNTESMGFADIEKSLAHLAEKARAGAITMEDMAGGTFTISNGGVFGSLMGTPIINVPQSGILGMHATKMRPVVLANGEIVARPMMYLALTYDHRLVDGREAVTCLKSIADKIADPERLLLDL 422
BLAST of NO19G01350 vs. NCBI_GenBank
Match: XP_009821610.1 (hypothetical protein H257_00569 [Aphanomyces astaci] >ETV89210.1 hypothetical protein H257_00569 [Aphanomyces astaci]) HSP 1 Score: 356.7 bits (914), Expect = 1.100e-94 Identity = 227/383 (59.27%), Postives = 275/383 (71.80%), Query Frame = 0 Query: 88 LNVPSMGDSITEGTIVNWQKREGDWVNADDVIVVLETDKVSVDVRAPRAGIVKEVIGAEGDTVGVGSPLAKIDTSAAKPEGASPEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAERLKSAQNTAAMLTTFQEVDMGNLMEMRAAYKEEFEKTHGVKLGFMSAFVKASTAALLELPAVNAFIDEGTKEIVYRNYCDVSVAVASPAGLVVPVLRNAESMSFAGVEKQIALYGKKAKEGQLALEDMAGGTFTISNGGVFGSLFGTPIINPPQSAILGMHATKMRAVVGRDGQVMARPMMYLALTYDHRLIDGREAVTFLKSVAAKIEDPRRMVLEL 471 +NVPSMGDSI+EGT+V+W K GD V ADDV++V+ETDKVSVDVRAP+AG++++ + D V +G+PL + A+ GA+ A XXXXXXXXXXXXXXXXXXXXXXXXXXXXX AERLK +QNT+A LTTFQEVDM LM +R+ YK+ FEK H VKLGFMSAF+KAS AALLE P VNA ID+ EI+YR++ D+SVAVA+P GLV PVL+N ESMSFA +EK +A +KA+ G++ +EDMAGG FTISNGGVFGSL GTPIIN PQ+ ILGMHATKMR VV +G+++ARPMMYLALTYDHRL+DGREAVT LKS+A KI DP R++L+L Sbjct: 168 VNVPSMGDSISEGTVVSWTKGPGDHVEADDVVLVIETDKVSVDVRAPQAGVIQQSLVNVEDVVTIGAPLFTLIPGAS---GATKAA----------------APXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVATNISSPLLGGSLPRGTTREKMSRMRLRIAERLKESQNTSASLTTFQEVDMSKLMALRSTYKDSFEKKHHVKLGFMSAFIKASAAALLENPGVNASIDDKHAEIIYRDFVDISVAVATPKGLVTPVLKNTESMSFADIEKTLAQLAEKARAGEITMEDMAGGNFTISNGGVFGSLMGTPIINVPQAGILGMHATKMRPVVLANGEIVARPMMYLALTYDHRLVDGREAVTCLKSIADKIADPERLLLDL 531
BLAST of NO19G01350 vs. NCBI_GenBank
Match: XP_008613423.1 (2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [Saprolegnia diclina VS20] >EQC33300.1 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [Saprolegnia diclina VS20]) HSP 1 Score: 355.5 bits (911), Expect = 2.500e-94 Identity = 239/383 (62.40%), Postives = 280/383 (73.11%), Query Frame = 0 Query: 88 LNVPSMGDSITEGTIVNWQKREGDWVNADDVIVVLETDKVSVDVRAPRAGIVKEVIGAEGDTVGVGSPLAKIDTSAAKPEGASPEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAERLKSAQNTAAMLTTFQEVDMGNLMEMRAAYKEEFEKTHGVKLGFMSAFVKASTAALLELPAVNAFIDEGTKEIVYRNYCDVSVAVASPAGLVVPVLRNAESMSFAGVEKQIALYGKKAKEGQLALEDMAGGTFTISNGGVFGSLFGTPIINPPQSAILGMHATKMRAVVGRDGQVMARPMMYLALTYDHRLIDGREAVTFLKSVAAKIEDPRRMVLEL 471 +NVPSMGDSI+EGT+V+W K GD V+ D+V++VLETDKVSVDVRAP+AG++++ + D V +G+PL + AA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX AERLK +QNT+A LTTFQEVDM LM MR YK+ FE H VKLGFMSAF+KAS ALLE+P VNA IDE EIVYR++ D+SVAVA+P GLV PVLRN ESM FA +EK +A +KA+ G + +EDMAGGTFTISNGGVFGSL GTPIIN PQS ILGMHATKMR VV +G+++ARPMMYLALTYDHRL+DGREAVT LKS+A KI DP R++L+L Sbjct: 174 VNVPSMGDSISEGTVVSWTKGAGDHVDVDEVVLVLETDKVSVDVRAPQAGVIQKTLVNVDDVVEIGAPLFHMVPGAA-----------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVMLGGASREVRREKMNRMRLRIAERLKESQNTSASLTTFQEVDMSKLMAMRKTYKDAFEAKHNVKLGFMSAFIKASANALLEVPGVNASIDEAHSEIVYRDFVDISVAVATPKGLVTPVLRNTESMGFADIEKSLAHLAEKARAGAITMEDMAGGTFTISNGGVFGSLMGTPIINVPQSGILGMHATKMRPVVLANGEIVARPMMYLALTYDHRLVDGREAVTCLKSIADKIADPERLLLDL 533 The following BLAST results are available for this feature:
BLAST of NO19G01350 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO19G01350 ID=NO19G01350|Name=NO19G01350|organism=Nannochloropsis oceanica|type=gene|length=2152bpback to top protein sequence of NO19G01350.1 >NO19G01350.1-protein ID=NO19G01350.1-protein|Name=NO19G01350.1|organism=Nannochloropsis oceanica|type=polypeptide|length=471bpback to top Synonyms
Publications
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