NO19G01220, NO19G01220 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO19G01220 vs. NCBI_GenBank
Match: EWM23648.1 (trna (uracil-5-)-methyltransferase [Nannochloropsis gaditana]) HSP 1 Score: 510.0 bits (1312), Expect = 1.100e-140 Identity = 310/636 (48.74%), Postives = 370/636 (58.18%), Query Frame = 0 Query: 9 EEDADGILLLQHDTLGTDLSYLCLDDYSHEQYEVSLQGKVQALRELFQPYWSSVLTVFRSPPVHHRLRAKFGIGRVITRNEGSQXXXXXXXXXXXXXXLEKISEGTAANTMTSSKLCYLMWGYDQRPVAISSFPLASRRINDLMPRLLQALEAGPVVLRRGLRAVNFLDTLAGDTLISLMYQVPLIEGGKEGGQGGFWAEAAGIWLRDGLGCQVVGRSKGRVVAVDRAYVTEAFHLF---PCSSSSSSPCFSSFYLGNNCEGKGDKARKAEELVSFFPPPSSSPHPSPCSHIPVPTILRYKQWEGAFSNPNGQMAMHTIRWLCARADAILLAADEAK------TEADEEGGNRA-----------HEGLGGCGESKTGSDKXXXXXXXXXXXXXXXXXXXRQNCNHHSTKSTCDLLELYCGGGNHTVALSRKFQRVVGVEIDKRLVAVARENLVLNGIENTTIIQIPSEKFRVEELGKYRRK------EREKERKAAAAVVPGEVEGMKVGDCGNSKEVEXXXXXXXXXXXXXXXXXXXFNFGVVLVDPPRVGLDRHTRKLISQYEHILYISCGPHSMLRDLQGEDEEKQERSTDKTYRSLAGFGLVETHDVVDMCVLDHFPGTMHIEAAVHLRRR 619 E + IL L + LG DLSYL + S +QYE SLQ KV LR +F PYWS T+FRSPPVH+RLRAKFGIGRV+ + S T A + KLCYLMWG D++ V ISSFPLASRRINDLMPRLL AL GP++LRR LRAVNFLDTLAGDTLI+LMY+ EGGK + W AA +++ LG QVVGR K + VDRAYV E F L P SS +SP + G G R P +S+ P PC P+ILRYKQW+GAFSNPNG MA+HT+RWLCARADA+L D + EADE G R EG GG G + D + DLLEL+CGGGNHTVALSRKF+RVVGVEID+RLVA A+ENL LNG++N ++IQIPSE+F E LG YRR+ + PG+ G+ G + + +F VVLVDPPR GLDRHTRK++S+YE ILYISC P S+LRDL+GE EE++ +S D+ + SLAGFGLV TH VVDMCVLDHFPGT HIE AVHL+RR Sbjct: 5 EGRCEDILTLAGEALGIDLSYLSPNSASLDQYETSLQRKVDELRSIFFPYWSCEPTIFRSPPVHYRLRAKFGIGRVLPQASHPAGPMAGITE----------SARTGAPQGSPGKLCYLMWGADKKLVVISSFPLASRRINDLMPRLLLALGEGPLILRRSLRAVNFLDTLAGDTLIALMYETAWAEGGKAAKEE--WVAAAREHVKEALGVQVVGRGKRVALPVDRAYVLEEFCLSPPPPASSRGASP-LPPYAPGTGGADTGRDPRGG-------PRRASAGVPHPC-----PSILRYKQWDGAFSNPNGCMALHTLRWLCARADAVLQRGDAPRGVQATGGEADERGRERQMEDGDREQQGDTEGRGGPGGCEGCVDVASGGEGRVCRERQGLRPRVCRPPPSGDKPPAFDLLELFCGGGNHTVALSRKFRRVVGVEIDRRLVAAAKENLALNGVKNASVIQIPSERFHPERLGHYRRQXXXXXXXXXXXXXXXXMLGPGKRVASAGGEAGLTARAQGMGQSPPGEDDP--------SFRVVLVDPPRAGLDRHTRKMVSKYEDILYISCAPLSLLRDLRGESEEERRQSADRKFLSLAGFGLVHTHKVVDMCVLDHFPGTRHIEVAVHLQRR 607
BLAST of NO19G01220 vs. NCBI_GenBank
Match: XP_005854838.1 (trna (uracil-5-)-methyltransferase, partial [Nannochloropsis gaditana CCMP526] >EKU21518.1 trna (uracil-5-)-methyltransferase, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 198.7 bits (504), Expect = 5.200e-47 Identity = 107/189 (56.61%), Postives = 125/189 (66.14%), Query Frame = 0 Query: 9 EEDADGILLLQHDTLGTDLSYLCLDDYSHEQYEVSLQGKVQALRELFQPYWSSVLTVFRSPPVHHRLRAKFGIGRVITRNEGSQXXXXXXXXXXXXXXLEKISEGTAANTMTSSKLCYLMWGYDQRPVAISSFPLASRRINDLMPRLLQALEAGPVVLRRGLRAVNFLDTLAGDTLISLMYQVPLIEGG 198 E + IL+L + LG DLSYL + S +QYE SLQ KV LR +F PYWS T+FRSPPVH+RLRAKFGIGRV+ + S T A + KLCYLMWG D++PV ISSFPLASRRINDLMPRLL AL GP++LRR LRAVNFLDTLAGDTLI+L+Y+ EGG Sbjct: 5 EGRCEDILMLAGEALGIDLSYLSPNSASLDQYETSLQRKVDELRSIFFPYWSCQPTIFRSPPVHYRLRAKFGIGRVLPQASHPAGPMAGITE----------SARTGAPQGSPGKLCYLMWGADKKPVVISSFPLASRRINDLMPRLLLALGEGPLILRRSLRAVNFLDTLAGDTLIALIYETAWAEGG 183
BLAST of NO19G01220 vs. NCBI_GenBank
Match: XP_002500539.1 (predicted protein [Micromonas commoda] >ACO61797.1 predicted protein [Micromonas commoda]) HSP 1 Score: 179.1 bits (453), Expect = 4.300e-41 Identity = 176/638 (27.59%), Postives = 233/638 (36.52%), Query Frame = 0 Query: 33 DDYSHEQYEVSLQGKVQALRELFQPYWSSVL-----------------TVFRSPPVHHRLRAKFGIGRVITRNEGSQXXXXXXXXXXXXXXLEKISEGTAANTMTSSKLCYLMWGYDQRPVAISSFPLASRRINDLMPRLLQALEAGPVVLRRGLRAVNFLDT--LAGDTLISLMYQVPLIE--------------------------GGKEGGQGGFWAEAAGIWLRDGLGCQVVGRSKG-RVVAVDRAYVTEAFHLFPCSSSSSSPCFSSFYLGNNCEGKGDKARKAEELVSFFPPPSSSPHPSPCSHIPVPTILRYKQWEGAFSNPNGQMAMHTIRWLCARADAILLAADEAKTEADEEGGNRAHEGLGGCGESKTGSDKXXXXXXXXXXXXXXXXXXXRQNCNHHSTKSTCDLLELYCGGGNHTVALSRKFQRVVGVEIDKRLVAVARENLVLNGIENTTIIQIPSEKFRVEELGKYRRKEREKE----RKAAAAVVPGEVEGMKVGDCGNSKEVEXXXXXXXXXXXXXXXXXXXFNFGVVLVDPPRVGLDRHTRKLISQYEHILYISCGPHSMLRDLQGEDEEKQERSTDKTYRSLAGF-GLVETHDVVDMCVLDHFPGTMHIEAAVHLRRRR 620 D Y +L KV L LF P VF SPP++ R R +F + E + +L Y MW + V I+ FP+A R I +LMP +L+ EA P L GL+A++FL + + G L++++Y P+ E GG + G GF D ++GRS+G ++V D +V E L D R LRY+Q EGAFSNPN MA T+ WLC A E LGG E H + + LLELY G GNHTVAL++ F V VE+ L ARENL NG+EN ++ PSE G RRK+R +E + A AA G +G K GD G+ E + + VVLVDPPR GLD T L+S+++ +LYISC P L + + T + G+ GL THD+V V DHFP T HIE RRR Sbjct: 648 DPVDASTYSAALDAKVAELERLFSPLMQQASIPILNAKGVDRSVSVRPEVFPSPPLNFRSRCRFQV-----------------MWEDAPVTAESTGITPGESVEPGRRLSYRMWNKGKPTVPITEFPMALREIEELMPAVLREAEAHP-ELGDGLQAIHFLASRGIRGGMLVTMVYGRPIDEAWKMAAEGPRARLKAAMVDIRERVYGGGDDDGFDGFAGPRGDDEELDATALNILGRSRGTQIVVGDACHVFETLAL------------------------RDGRR-----------------------------LRYRQAEGAFSNPNSFMAESTLDWLCDCA------------------ATTVREALGGTSE-------------------------------HSAEAAPPSLLELYSGNGNHTVALAKYFDSVAAVELSGVLCEAARENLERNGVENAKVLHSPSESV---ARGMLRRKKRHEEGRVGKAAMAAAATGAGDGSKRGD-GSGMEFDINA------------------YDVVLVDPPRAGLDPDTLDLVSRFDVVLYISCDPRKGLLENAVGPHAARALDTGEFEGEFKGWSGLARTHDLVRFAVFDHFPYTRHIECGACFVRRR 1143
BLAST of NO19G01220 vs. NCBI_GenBank
Match: WP_078085881.1 (tRNA (uridine(54)-C5)-methyltransferase TrmA [Microbulbifer mangrovi]) HSP 1 Score: 168.7 bits (426), Expect = 5.800e-38 Identity = 156/593 (26.31%), Postives = 229/593 (38.62%), Query Frame = 0 Query: 30 LCLDDYSHEQYEVSLQGKVQALRELFQPYWSSVLTVFRSPPVHHRLRAKFGIGRVITRNEGSQXXXXXXXXXXXXXXLEKISEGTAANTMTSSKLCYLMW--GYDQRPVAISSFPLASRRINDLMPRLLQALEAGPVVLRRGLRAVNFLDTLAGDTLISLMYQVPLIEGGKEGGQGGFWAEAAGIWLRDGLGCQVVGRSKGRVVAVDRAYVTEAFHLFPCSSSSSSPCFSSFYLGNNCEGKGDKARKAEELVSFFPPPSSSPHPSPCSHIPVPTILRYKQWEGAFSNPNGQMAMHTIRWLCARADAILLAADEAKTEADEEGGNRAHEGLGGCGESKTGSDKXXXXXXXXXXXXXXXXXXXRQNCNHHSTKSTCDLLELYCGGGNHTVALSRKFQRVVGVEIDKRLVAVARENLVLNGIENTTIIQIPSEKF--RVEELGKYRRKEREKERKAAAAVVPGEVEGMKVGDCGNSKEVEXXXXXXXXXXXXXXXXXXXFNFGVVLVDPPRVGLDRHTRKLISQYEHILYISCGPHSMLRDLQGEDEEKQERSTDKTYRSLAGFGLVETHDVVDMCVLDHFPGTMHIEAAVHLRRR 619 + L + + Y+ L KV LR F P+ S VF SPP H+RLRA+F + + EG ++ Y M+ G ++P I F + SRRIN LMP LL+A+ +LR+ L FL TL+GD LI+L+Y PL E W + A L+D LG ++GRS+ + + +DR YV E + +G+ +YKQ EG+F+ PNG + I+W AR+ C E G DLLELYCG GN T+ L+ KF++V+ EI K V A+EN+ NG++N I+++ SE+F ++++ +RR ++G+ + ++F VLVDPPR GLD T +I+++ ILYISC P + L +L+ L +TH V + D FP T H E+AV L RR Sbjct: 1 MALHRVNTDDYQQQLDQKVDRLRGAFSPFTSLAPEVFPSPPSHYRLRAEFKMWQ----------------------------EG--------GRVDYAMYKQGEYKKPFVIQEFTVGSRRINALMPPLLEAINDSE-ILRKRLFCTEFLTTLSGDALITLIYHKPLDEA---------WEQEARA-LQDHLGVPILGRSRKQKLVLDRDYVIEKLEI---------------------DGRS---------------------------------YQYKQVEGSFTQPNGDICTSMIQW--ARS----------------------------CCEDTEG-----------------------------------DLLELYCGNGNFTIPLAEKFRKVLATEISKVSVNAAQENIAANGVDNLDIVRLSSEEFTQAIDKVRPFRR-----------------LKGVDL---------------------------ESYDFSTVLVDPPRAGLDADTCAMIARFPRILYISCNPQTQLENLE---------------------ELTKTHKVERFAIFDQFPYTDHTESAVLLVRR 362
BLAST of NO19G01220 vs. NCBI_GenBank
Match: WP_010130808.1 (tRNA (uridine(54)-C5)-methyltransferase TrmA [Microbulbifer agarilyticus]) HSP 1 Score: 161.0 bits (406), Expect = 1.200e-35 Identity = 149/591 (25.21%), Postives = 223/591 (37.73%), Query Frame = 0 Query: 30 LCLDDYSHEQYEVSLQGKVQALRELFQPYWSSVLTVFRSPPVHHRLRAKFGIGRVITRNEGSQXXXXXXXXXXXXXXLEKISEGTAANTMTSSKLCYLMW--GYDQRPVAISSFPLASRRINDLMPRLLQALEAGPVVLRRGLRAVNFLDTLAGDTLISLMYQVPLIEGGKEGGQGGFWAEAAGIWLRDGLGCQVVGRSKGRVVAVDRAYVTEAFHLFPCSSSSSSPCFSSFYLGNNCEGKGDKARKAEELVSFFPPPSSSPHPSPCSHIPVPTILRYKQWEGAFSNPNGQMAMHTIRWLCARADAILLAADEAKTEADEEGGNRAHEGLGGCGESKTGSDKXXXXXXXXXXXXXXXXXXXRQNCNHHSTKSTCDLLELYCGGGNHTVALSRKFQRVVGVEIDKRLVAVARENLVLNGIENTTIIQIPSEKFRVEELGKYRRKEREKERKAAAAVVPGEVEGMKVGDCGNSKEVEXXXXXXXXXXXXXXXXXXXFNFGVVLVDPPRVGLDRHTRKLISQYEHILYISCGPHSMLRDLQGEDEEKQERSTDKTYRSLAGFGLVETHDVVDMCVLDHFPGTMHIEAAVHLRRR 619 + L + ++Y+ L KV LRE + PY VF SPP H+RLRA+F + + ++ Y M+ G ++P I F + SRRIN+LMP LL A+ A +LR+ L FL TL+GD LI+L+Y PL G W E+ L++ LG V+GRS+ + + ++R YV E + +G+ + +YKQ EG+F+ PNG++ I W AK+ + G +A + DLLELYCG GN T+ L+ F++ + EI K V A+EN+ NG++N I+++ SE+F + + K R R K+ ++F VLVDPPR GLD+ T +I ++ ILYISC P + L +L L +TH + + D FP T H E+ V L R+ Sbjct: 1 MALHRVNTDEYQQQLDQKVARLREAYTPYTELAPEVFPSPPSHYRLRAEFKMWQ------------------------------------DGGRVDYAMYKQGEYKKPFVIQEFTVGSRRINELMPPLLDAINASE-ILRKRLFCTEFLTTLSGDALITLIYHKPL---------GDEW-ESEARALQELLGVPVLGRSRKQKLVLERDYVIEKLDI---------------------DGR---------------------------------VFQYKQVEGSFTQPNGEICRSMISW--------------AKSCCPQPGAEQA----------------------------------------------SGDLLELYCGNGNFTIPLASHFRKALATEISKVSVNAAQENIAANGVDNLAILRLSSEEF-TQAIDKLRPFRRLKD-----------------------------------------FDLDSYDFSTVLVDPPRAGLDQDTCAMIVRFPRILYISCNPETQLENLA---------------------ELTKTHRIERFAIFDQFPYTDHTESGVLLVRK 367
BLAST of NO19G01220 vs. NCBI_GenBank
Match: WP_027021434.1 (tRNA (uridine(54)-C5)-methyltransferase TrmA [Conchiformibius steedae]) HSP 1 Score: 159.8 bits (403), Expect = 2.700e-35 Identity = 155/587 (26.41%), Postives = 216/587 (36.80%), Query Frame = 0 Query: 37 HEQYEVSLQGKVQALRELFQPYWSSVLTVFRSPPVHHRLRAKFGIGRVITRNEGSQXXXXXXXXXXXXXXLEKISEGTAANTMTSSKLCYLMWGYDQRP-----VAISSFPLASRRINDLMPRLLQALEAGPVVLRRGLRAVNFLDTLAGDTLISLMYQVPLIEGGKEGGQGGFWAEAAGIWLRDGLGCQVVGRSKGRVVAVDRAYVTEAFHLFPCSSSSSSPCFSSFYLGNNCEGKGDKARKAEELVSFFPPPSSSPHPSPCSHIPVPTILRYKQWEGAFSNPNGQMAMHTIRWLCARADAILLAADEAKTEADEEGGNRAHEGLGGCGESKTGSDKXXXXXXXXXXXXXXXXXXXRQNCNHHSTKSTCDLLELYCGGGNHTVALSRKFQRVVGVEIDKRLVAVARENLVLNGIENTTIIQIPSEKFRVEELGKYRRKEREKERKAAAAVVPGEVEGMKVGDCGNSKEVEXXXXXXXXXXXXXXXXXXXFNFGVVLVDPPRVGLDRHTRKLISQYEHILYISCGPHSMLRDLQGEDEEKQERSTDKTYRSLAGFGLVETHDVVDMCVLDHFPGTMHIEAAVHLRRR 619 H Y L K L+ L P+ + VF SPP H+R+RA+F I ++CY M+ Q+ + + FP A+ IN LMPRLL A+ G VLR L FL TL+GD LI+L+Y L G W AA L+D LG ++GRS+G+ + + R +VTE+ + G+ L Y+Q EG FS PN + + W A+D A + LGG DLLELYCG GN TV LSR+F+RV+ E+ K V A+ NL N +N + ++ + EEL + ER R A + + + D F+F V VDPPR G+D T KL++ +++ILYISC PHS+ +L+ L TH VV + D FP T HIE V+L+R+ Sbjct: 2 HSDYSAQLAEKTARLQNLLAPFDAPAPEVFASPPQHYRMRAEFRIWH------------------------------------DGDEICYAMFERGQKAATASLIRLQQFPAAAESINALMPRLLAAVR-GDAVLRERLYQCEFLATLSGDMLITLIYHKKL---------GDDWT-AAAQRLQDDLGIALIGRSRGQKIVLKRDFVTESLKV-----------------------NGE-------------------------------TLHYRQIEGGFSQPNALVCEKMLAW----------ASDCA-------------QNLGG------------------------------------------DLLELYCGNGNFTVPLSRRFRRVLATELSKTSVKAAQWNLATNSADNVQLARLSA-----EELAQAFAGERVFRRLAE--------QNIDLSD---------------------------FDFSTVFVDPPRAGVDSDTLKLLADFDNILYISCNPHSLADNLK---------------------QLCATHQVVRSALFDQFPFTEHIECGVYLQRK 361
BLAST of NO19G01220 vs. NCBI_GenBank
Match: WP_077403755.1 (tRNA (uridine(54)-C5)-methyltransferase TrmA [Microbulbifer agarilyticus] >AQQ67774.1 tRNA (uridine(54)-C5)-methyltransferase TrmA [Microbulbifer agarilyticus]) HSP 1 Score: 159.5 bits (402), Expect = 3.500e-35 Identity = 147/591 (24.87%), Postives = 223/591 (37.73%), Query Frame = 0 Query: 30 LCLDDYSHEQYEVSLQGKVQALRELFQPYWSSVLTVFRSPPVHHRLRAKFGIGRVITRNEGSQXXXXXXXXXXXXXXLEKISEGTAANTMTSSKLCYLMW--GYDQRPVAISSFPLASRRINDLMPRLLQALEAGPVVLRRGLRAVNFLDTLAGDTLISLMYQVPLIEGGKEGGQGGFWAEAAGIWLRDGLGCQVVGRSKGRVVAVDRAYVTEAFHLFPCSSSSSSPCFSSFYLGNNCEGKGDKARKAEELVSFFPPPSSSPHPSPCSHIPVPTILRYKQWEGAFSNPNGQMAMHTIRWLCARADAILLAADEAKTEADEEGGNRAHEGLGGCGESKTGSDKXXXXXXXXXXXXXXXXXXXRQNCNHHSTKSTCDLLELYCGGGNHTVALSRKFQRVVGVEIDKRLVAVARENLVLNGIENTTIIQIPSEKFRVEELGKYRRKEREKERKAAAAVVPGEVEGMKVGDCGNSKEVEXXXXXXXXXXXXXXXXXXXFNFGVVLVDPPRVGLDRHTRKLISQYEHILYISCGPHSMLRDLQGEDEEKQERSTDKTYRSLAGFGLVETHDVVDMCVLDHFPGTMHIEAAVHLRRR 619 + L + ++Y+ L KV LRE + PY VF SPP H+R+RA+F + + ++ Y M+ G ++P I F + SRRIN+LMP LL A+ A +LR+ L FL TL+GD LI+L+Y PL G W E+ L++ LG ++GRS+ + + ++R YV E + +G+ +YKQ EG+F+ PNG++ I W A + E+ K++ DLLELYCG GN T+ L+ F++V+ EI K V A+EN+ NG++N I+++ SE+F + + K R R K+ ++F VLVDPPR GLD+ T +I+++ ILYISC P + L +L L +TH + + D FP T H E+ V L R+ Sbjct: 1 MALHRVNTDEYQQQLDQKVARLREAYTPYTDLAPEVFPSPPSHYRMRAEFKMWQ------------------------------------DGGRVDYAMYKQGEYKKPFVIQEFTVGSRRINELMPPLLDAINASE-MLRKRLFCTEFLTTLSGDALITLIYHKPL---------GDEW-ESEARALQEQLGVPILGRSRKQKLVLERDYVIEKLDI---------------------DGRE---------------------------------YQYKQVEGSFTQPNGEICRSMISW-----------AKSCCPQTSED-------------------------------------------------KASGDLLELYCGNGNFTIPLAAHFRKVLATEISKVSVNAAQENIAANGVDNLAILRLSSEEF-TQAIDKVRPFRRLKD-----------------------------------------FDLDSYDFSTVLVDPPRAGLDQDTCAMIARFPKILYISCNPETQLENLA---------------------ELTKTHRIERFAIFDQFPYTDHTESGVLLVRK 367
BLAST of NO19G01220 vs. NCBI_GenBank
Match: WP_015046129.1 (tRNA (uridine(54)-C5)-methyltransferase TrmA [Simiduia agarivorans] >AFU97956.1 tRNA (uracil-5-)-methyltransferase [Simiduia agarivorans SA1 = DSM 21679]) HSP 1 Score: 158.3 bits (399), Expect = 7.800e-35 Identity = 152/583 (26.07%), Postives = 204/583 (34.99%), Query Frame = 0 Query: 36 SHEQYEVSLQGKVQALRELFQPYWSSVLTVFRSPPVHHRLRAKFGIGRVITRNEGSQXXXXXXXXXXXXXXLEKISEGTAANTMTSSKLCYLMWGYDQRPVAISSFPLASRRINDLMPRLLQALEAGPVVLRRGLRAVNFLDTLAGDTLISLMYQVPLIEGGKEGGQGGFWAEAAGIWLRDGLGCQVVGRSKGRVVAVDRAYVTEAFHLFPCSSSSSSPCFSSFYLGNNCEGKGDKARKAEELVSFFPPPSSSPHPSPCSHIPVPTILRYKQWEGAFSNPNGQMAMHTIRWLCARADAILLAADEAKTEADEEGGNRAHEGLGGCGESKTGSDKXXXXXXXXXXXXXXXXXXXRQNCNHHSTKSTCDLLELYCGGGNHTVALSRKFQRVVGVEIDKRLVAVARENLVLNGIENTTIIQIPSEKFRVEELGKYRRKEREKERKAAAAVVPGEVEGMKVGDCGNSKEVEXXXXXXXXXXXXXXXXXXXFNFGVVLVDPPRVGLDRHTRKLISQYEHILYISCGPHSMLRDLQGEDEEKQERSTDKTYRSLAGFGLVETHDVVDMCVLDHFPGTMHIEAAVHLRRR 619 S E Y+ L KV + F P + VF SP H+RLRA+F I + +G A M G ++P I FP+ + RIN LMPRLL + A LR+ L + FL TL+GD LI+L+Y PL E W +AA + LR LG ++GRS+ + + ++R YV E + +GK YKQ EG F+ PNG + + W A A +G G DLLELYCG GN T+ L++ F RV+ EI K V A N LN IEN I ++ SE+F + + K R R ++F + VDPPR GLD T L ++E I+YISC PH++L +LQ GL +H V V D FP T H+E L RR Sbjct: 7 SPEHYDDQLADKVATIERAFAPLDIPAIEVFDSPKSHYRLRAEFKIWQ---------------------------EDGRAHYAMYEK-------GEYKKPYIIDGFPVGAERINQLMPRLLAEINANE-TLRKKLFSAEFLTTLSGDALITLLYHKPLDEQ---------WEQAARV-LRTSLGVDLIGRSRKQKITLERDYVNETL---------------------SVDGKP---------------------------------FHYKQIEGGFTQPNGAVCEKMLAWAVA-----------------------ASKGCSG------------------------------------------DLLELYCGNGNFTLPLAQNFDRVLATEISKTSVEAALHNAELNRIENVAIARMSSEEF-TQAMDKVRPFRR-----------------------------------------LAHIDLDSYHFSTLFVDPPRAGLDPDTLALAQRFERIIYISCNPHTLLDNLQ---------------------GLSNSHKVDRFAVFDQFPYTDHLECGAILSRR 362
BLAST of NO19G01220 vs. NCBI_GenBank
Match: WP_044498537.1 (tRNA (uridine(54)-C5)-methyltransferase TrmA [Pseudomonas saudimassiliensis] >CEA02915.1 tRNA (uracil-5-)-methyltransferase [Pseudomonas saudimassiliensis] >CEF26004.1 tRNA (uracil-5-)-methyltransferase [Pseudomonas saudimassiliensis]) HSP 1 Score: 157.5 bits (397), Expect = 1.300e-34 Identity = 152/579 (26.25%), Postives = 218/579 (37.65%), Query Frame = 0 Query: 40 YEVSLQGKVQALRELFQPYWSSVLTVFRSPPVHHRLRAKFGIGRVITRNEGSQXXXXXXXXXXXXXXLEKISEGTAANTMTSSKLCYLMWGYDQRPVAISSFPLASRRINDLMPRLLQALEAGPVVLRRGLRAVNFLDTLAGDTLISLMYQVPLIEGGKEGGQGGFWAEAAGIWLRDGLGCQVVGRSKGRVVAVDRAYVTEAFHLFPCSSSSSSPCFSSFYLGNNCEGKGDKARKAEELVSFFPPPSSSPHPSPCSHIPVPTILRYKQWEGAFSNPNGQMAMHTIRWLCARADAILLAADEAKTEADEEGGNRAHEGLGGCGESKTGSDKXXXXXXXXXXXXXXXXXXXRQNCNHHSTKSTCDLLELYCGGGNHTVALSRKFQRVVGVEIDKRLVAVARENLVLNGIENTTIIQIPSEKFRVEELGKYRRKEREKERKAAAAVVPGEVEGMKVGDCGNSKEVEXXXXXXXXXXXXXXXXXXXFNFGVVLVDPPRVGLDRHTRKLISQYEHILYISCGPHSMLRDLQGEDEEKQERSTDKTYRSLAGFGLVETHDVVDMCVLDHFPGTMHIEAAVHLRRR 619 YE L+ K Q L L QP+ + VF SP H RLRA+F + +G M G ++RP+ I P+AS+RIN+LM LL+A +A P VL R L + FL TL+G+ L++L Y P+ E W AA + L + LG ++GRS+GR + R +V EA + Y+Q EG F+ PNGQ+ H + W A+ A D ++ DLLELYCG GN T+ LS +F+RV+ E+ K V A EN+ LN ++N T++++ S EE+ + RE R ++G+ + ++FG V VDPPR GLD T +L+ Y+ ILYISC PH++ +L DE L TH +V + D FP + H+E+ V L RR Sbjct: 10 YEQQLEEKRQRLIALLQPFAAPEPEVFASPREHFRLRAEFRLW---------------------------YEQGQPHYAMFEP-------GDNRRPILIEQLPIASKRINELMMPLLEACKADP-VLGRKLFQIEFLTTLSGEALVTLCYHRPIDED---------WDVAATV-LAEQLGILLIGRSRGRKRVLQRDHVLEALTV------------------------------------------------------AGRTWHYQQAEGGFTQPNGQVNQHMLAW------ALDAAGDNSR-----------------------------------------------------------DLLELYCGNGNFTLPLSTRFRRVLATELSKSSVRSALENIALNQVDNVTLVRLAS-----EEVTQALTGVREFRR----------LQGVDLS---------------------------GYDFGTVFVDPPRAGLDPATLELVKGYDRILYISCNPHTLAANL---DE------------------LHGTHRIVRCALFDQFPYSHHMESGVLLERR 361
BLAST of NO19G01220 vs. NCBI_GenBank
Match: WP_061900804.1 (tRNA (uridine(54)-C5)-methyltransferase TrmA [Vibrio cidicii] >KYN81821.1 tRNA (uracil-5-)-methyltransferase [Vibrio cidicii]) HSP 1 Score: 157.5 bits (397), Expect = 1.300e-34 Identity = 153/590 (25.93%), Postives = 222/590 (37.63%), Query Frame = 0 Query: 34 DYSHEQYEVSLQGKVQALRELFQPYWSSVLTVFRSPPVHHRLRAKFGIGRVITRNEGSQXXXXXXXXXXXXXXLEKISEGTAANTMTSSKLCYLMWGYDQR-PVAISSFPLASRRINDLMPRLLQALEAGPVVLRRGLRAVNFLDTLAGDTLISLMYQVPLIEGGKEGGQGGFWAEAAGIWLR----DGLGCQVVGRSKGRVVAVDRAYVTEAFHLFPCSSSSSSPCFSSFYLGNNCEGKGDKARKAEELVSFFPPPSSSPHPSPCSHIPVPTILRYKQWEGAFSNPNGQMAMHTIRWLCARADAILLAADEAKTEADEEGGNRAHEGLGGCGESKTGSDKXXXXXXXXXXXXXXXXXXXRQNCNHHSTKSTCDLLELYCGGGNHTVALSRKFQRVVGVEIDKRLVAVARENLVLNGIENTTIIQIPSEKFRVEELGKYRRKEREKERKAAAAVVPGEVEGMKVGDCGNSKEVEXXXXXXXXXXXXXXXXXXXFNFGVVLVDPPRVGLDRHTRKLISQYEHILYISCGPHSMLRDLQGEDEEKQERSTDKTYRSLAGFGLVETHDVVDMCVLDHFPGTMHIEAAVHLRRR 619 D + ++Y+ L KVQ L ++F PY + L VF SP H+R+RA+F + +EG + + Y+M+ + R + FP ASR INDLMP L++A++ G LRR L V+FL TL+G+ L+SL+Y L E W E A + +G ++GR++ + +DR YV E + GK P I Y+Q E +F+ PNG++A + W A D C + G DLLELYCG GN ++AL++ F+RV+ E+ K V A+ N+ N IEN II++ +E+F GK RE R A V +N + VDPPR G+D T K++ YE ILYISC P ++L +L+ L ETH + + D FP T H+EA V L R+ Sbjct: 5 DVNPQRYQAQLAEKVQRLTDMFAPYQAPELEVFESPEQHYRMRAEFRVW-----HEGDE-------------------------------MYYIMFNQETREKYRVDQFPAASRLINDLMPLLIEAMQ-GNESLRRKLFQVDFLSTLSGEILVSLLYHRQLDEA---------WIENAKTLKQRLNDEGFNLNLIGRARKMKIVLDRDYVIEKL---------------------DVNGK-------------------------------PYI--YQQVENSFTQPNGKVAEKMLAW----------AVD--------------------CTQESQG-----------------------------------DLLELYCGNGNFSLALAQNFERVLATELAKPSVESAQYNIAANKIENVQIIRMSAEEFTEAMEGK-----REFRRLKDAGV-----------------------------------DLKSYNCNTIFVDPPRAGMDIDTCKMVQGYERILYISCNPETLLENLE---------------------ILSETHTITRFALFDQFPYTHHMEAGVMLERK 368 The following BLAST results are available for this feature:
BLAST of NO19G01220 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO19G01220 ID=NO19G01220|Name=NO19G01220|organism=Nannochloropsis oceanica|type=gene|length=1887bpback to top protein sequence of NO19G01220.1 >NO19G01220.1-protein ID=NO19G01220.1-protein|Name=NO19G01220.1|organism=Nannochloropsis oceanica|type=polypeptide|length=629bpback to top Synonyms
Publications
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