NO19G01190, NO19G01190 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO19G01190 vs. NCBI_GenBank
Match: XP_002970530.2 (uncharacterized protein At1g32220, chloroplastic isoform X1 [Selaginella moellendorffii]) HSP 1 Score: 188.7 bits (478), Expect = 2.500e-44 Identity = 109/242 (45.04%), Postives = 151/242 (62.40%), Query Frame = 0 Query: 52 KIVVLGGSGYVGRHVLQAALNRGADAVSINRSGKPEGGQASGSWLSQVKWVASDVFDSNSWAKELEGAVGVVSCIGAFGSNAFMERINGDANVLAVETAAKAGVPHFVYVSTVENNLPDFILK--GYFKGKKRAEEAVLKSFPGRKGMVLRPSFVYGTRQVGSLSLPLAAVGRPME-LLFRLPPFPSLRQTLPGTQALLAPPVSVQAVATVAAAGALGDGRVKEGEGEREGVLSVDDIVRLA 291 K+VVLGGSG+VG V +AA+ +G D S++RSGKP W+ QV WV+ +VF ++ W L+GA V+S IG FG+N ME+ING+AN++AV A KAG+P FVYVS + NLP F+L GYF GK++AE VL FPG G VLRP F+YG R++ + +PL +G+P++ L F S +++PG+ LL+ PVSV+ VA A L D GVL+++ I A Sbjct: 79 KVVVLGGSGFVGSSVCKAAIAQGIDVTSLSRSGKP---SYPDPWVDQVLWVSGNVFYAD-WNSLLKGATAVISTIGGFGTNEEMEKINGEANIIAVGEACKAGIPKFVYVSVHDYNLPFFVLNSLGYFTGKRKAEAEVLSKFPG-SGTVLRPGFIYGKRRINGVDVPLDIIGKPLDKFLTSAENFISPLKSIPGSDVLLSAPVSVEDVAGAAVKAVLDDSIF--------GVLTIEQIKEAA 307
BLAST of NO19G01190 vs. NCBI_GenBank
Match: XP_024530950.1 (uncharacterized protein At1g32220, chloroplastic isoform X2 [Selaginella moellendorffii]) HSP 1 Score: 188.7 bits (478), Expect = 2.500e-44 Identity = 109/242 (45.04%), Postives = 151/242 (62.40%), Query Frame = 0 Query: 52 KIVVLGGSGYVGRHVLQAALNRGADAVSINRSGKPEGGQASGSWLSQVKWVASDVFDSNSWAKELEGAVGVVSCIGAFGSNAFMERINGDANVLAVETAAKAGVPHFVYVSTVENNLPDFILK--GYFKGKKRAEEAVLKSFPGRKGMVLRPSFVYGTRQVGSLSLPLAAVGRPME-LLFRLPPFPSLRQTLPGTQALLAPPVSVQAVATVAAAGALGDGRVKEGEGEREGVLSVDDIVRLA 291 K+VVLGGSG+VG V +AA+ +G D S++RSGKP W+ QV WV+ +VF ++ W L+GA V+S IG FG+N ME+ING+AN++AV A KAG+P FVYVS + NLP F+L GYF GK++AE VL FPG G VLRP F+YG R++ + +PL +G+P++ L F S +++PG+ LL+ PVSV+ VA A L D GVL+++ I A Sbjct: 74 KVVVLGGSGFVGSSVCKAAIAQGIDVTSLSRSGKP---SYPDPWVDQVLWVSGNVFYAD-WNSLLKGATAVISTIGGFGTNEEMEKINGEANIIAVGEACKAGIPKFVYVSVHDYNLPFFVLNSLGYFTGKRKAEAEVLSKFPG-SGTVLRPGFIYGKRRINGVDVPLDIIGKPLDKFLTSAENFISPLKSIPGSDVLLSAPVSVEDVAGAAVKAVLDDSIF--------GVLTIEQIKEAA 302
BLAST of NO19G01190 vs. NCBI_GenBank
Match: EFJ20596.1 (hypothetical protein SELMODRAFT_152670 [Selaginella moellendorffii]) HSP 1 Score: 188.3 bits (477), Expect = 3.300e-44 Identity = 109/242 (45.04%), Postives = 151/242 (62.40%), Query Frame = 0 Query: 52 KIVVLGGSGYVGRHVLQAALNRGADAVSINRSGKPEGGQASGSWLSQVKWVASDVFDSNSWAKELEGAVGVVSCIGAFGSNAFMERINGDANVLAVETAAKAGVPHFVYVSTVENNLPDFILK--GYFKGKKRAEEAVLKSFPGRKGMVLRPSFVYGTRQVGSLSLPLAAVGRPME-LLFRLPPFPSLRQTLPGTQALLAPPVSVQAVATVAAAGALGDGRVKEGEGEREGVLSVDDIVRLA 291 K+VVLGGSG+VG V +AA+ +G D S++RSGKP W+ QV WV+ +VF ++ W L+GA V+S IG FG+N ME+ING+AN++AV A KAG+P FVYVS + NLP F+L GYF GK++AE VL FPG G VLRP F+YG R++ + +PL +G+P++ L F S +++PG+ LL+ PVSV+ VA A L D GVL+++ I A Sbjct: 22 KVVVLGGSGFVGSSVCKAAIAQGIDVTSLSRSGKP---SYPDPWVDQVLWVSGNVFYAD-WNSLLKGATAVISTIGGFGTNEEMEKINGEANIVAVGEACKAGIPKFVYVSVHDYNLPFFVLNSLGYFTGKRKAEAEVLSKFPG-SGTVLRPGFIYGKRRINGVDVPLDIIGKPLDKFLTSAENFISPLKSIPGSDVLLSAPVSVEDVAGAAVKAVLDDSIF--------GVLTIEQIKEAA 250
BLAST of NO19G01190 vs. NCBI_GenBank
Match: XP_024539129.1 (uncharacterized protein At1g32220, chloroplastic isoform X1 [Selaginella moellendorffii]) HSP 1 Score: 188.3 bits (477), Expect = 3.300e-44 Identity = 109/242 (45.04%), Postives = 151/242 (62.40%), Query Frame = 0 Query: 52 KIVVLGGSGYVGRHVLQAALNRGADAVSINRSGKPEGGQASGSWLSQVKWVASDVFDSNSWAKELEGAVGVVSCIGAFGSNAFMERINGDANVLAVETAAKAGVPHFVYVSTVENNLPDFILK--GYFKGKKRAEEAVLKSFPGRKGMVLRPSFVYGTRQVGSLSLPLAAVGRPME-LLFRLPPFPSLRQTLPGTQALLAPPVSVQAVATVAAAGALGDGRVKEGEGEREGVLSVDDIVRLA 291 K+VVLGGSG+VG V +AA+ +G D S++RSGKP W+ QV WV+ +VF ++ W L+GA V+S IG FG+N ME+ING+AN++AV A KAG+P FVYVS + NLP F+L GYF GK++AE VL FPG G VLRP F+YG R++ + +PL +G+P++ L F S +++PG+ LL+ PVSV+ VA A L D GVL+++ I A Sbjct: 79 KVVVLGGSGFVGSSVCKAAIAQGIDVTSLSRSGKP---SYPDPWVDQVLWVSGNVFYAD-WNSLLKGATAVISTIGGFGTNEEMEKINGEANIVAVGEACKAGIPKFVYVSVHDYNLPFFVLNSLGYFTGKRKAEAEVLSKFPG-SGTVLRPGFIYGKRRINGVDVPLDIIGKPLDKFLTSAENFISPLKSIPGSDVLLSAPVSVEDVAGAAVKAVLDDSIF--------GVLTIEQIKEAA 307
BLAST of NO19G01190 vs. NCBI_GenBank
Match: XP_002978610.2 (uncharacterized protein At1g32220, chloroplastic isoform X2 [Selaginella moellendorffii]) HSP 1 Score: 188.3 bits (477), Expect = 3.300e-44 Identity = 109/242 (45.04%), Postives = 151/242 (62.40%), Query Frame = 0 Query: 52 KIVVLGGSGYVGRHVLQAALNRGADAVSINRSGKPEGGQASGSWLSQVKWVASDVFDSNSWAKELEGAVGVVSCIGAFGSNAFMERINGDANVLAVETAAKAGVPHFVYVSTVENNLPDFILK--GYFKGKKRAEEAVLKSFPGRKGMVLRPSFVYGTRQVGSLSLPLAAVGRPME-LLFRLPPFPSLRQTLPGTQALLAPPVSVQAVATVAAAGALGDGRVKEGEGEREGVLSVDDIVRLA 291 K+VVLGGSG+VG V +AA+ +G D S++RSGKP W+ QV WV+ +VF ++ W L+GA V+S IG FG+N ME+ING+AN++AV A KAG+P FVYVS + NLP F+L GYF GK++AE VL FPG G VLRP F+YG R++ + +PL +G+P++ L F S +++PG+ LL+ PVSV+ VA A L D GVL+++ I A Sbjct: 74 KVVVLGGSGFVGSSVCKAAIAQGIDVTSLSRSGKP---SYPDPWVDQVLWVSGNVFYAD-WNSLLKGATAVISTIGGFGTNEEMEKINGEANIVAVGEACKAGIPKFVYVSVHDYNLPFFVLNSLGYFTGKRKAEAEVLSKFPG-SGTVLRPGFIYGKRRINGVDVPLDIIGKPLDKFLTSAENFISPLKSIPGSDVLLSAPVSVEDVAGAAVKAVLDDSIF--------GVLTIEQIKEAA 302
BLAST of NO19G01190 vs. NCBI_GenBank
Match: EFJ28660.1 (hypothetical protein SELMODRAFT_93869 [Selaginella moellendorffii]) HSP 1 Score: 187.2 bits (474), Expect = 7.300e-44 Identity = 108/242 (44.63%), Postives = 151/242 (62.40%), Query Frame = 0 Query: 52 KIVVLGGSGYVGRHVLQAALNRGADAVSINRSGKPEGGQASGSWLSQVKWVASDVFDSNSWAKELEGAVGVVSCIGAFGSNAFMERINGDANVLAVETAAKAGVPHFVYVSTVENNLPDFILK--GYFKGKKRAEEAVLKSFPGRKGMVLRPSFVYGTRQVGSLSLPLAAVGRPME-LLFRLPPFPSLRQTLPGTQALLAPPVSVQAVATVAAAGALGDGRVKEGEGEREGVLSVDDIVRLA 291 ++VVLGGSG+VG V +AA+ +G D S++RSGKP W+ QV WV+ +VF ++ W L+GA V+S IG FG+N ME+ING+AN++AV A KAG+P FVYVS + NLP F+L GYF GK++AE VL FPG G VLRP F+YG R++ + +PL +G+P++ L F S +++PG+ LL+ PVSV+ VA A L D GVL+++ I A Sbjct: 10 QVVVLGGSGFVGSSVCKAAIAQGIDVTSLSRSGKP---SYPDPWVDQVLWVSGNVFYAD-WNSLLKGATAVISTIGGFGTNEEMEKINGEANIIAVGEACKAGIPKFVYVSVHDYNLPFFVLNSLGYFTGKRKAEAEVLSKFPG-SGTVLRPGFIYGKRRINGVDVPLDIIGKPLDKFLTSAENFISPLKSIPGSDVLLSAPVSVEDVAGAAVKAVLDDSIF--------GVLTIEQIKEAA 238
BLAST of NO19G01190 vs. NCBI_GenBank
Match: XP_009606584.1 (PREDICTED: uncharacterized protein At1g32220, chloroplastic isoform X1 [Nicotiana tomentosiformis] >XP_016473327.1 PREDICTED: uncharacterized protein At1g32220, chloroplastic-like isoform X1 [Nicotiana tabacum]) HSP 1 Score: 186.8 bits (473), Expect = 9.600e-44 Identity = 99/208 (47.60%), Postives = 140/208 (67.31%), Query Frame = 0 Query: 52 KIVVLGGSGYVGRHVLQAALNRGADAVSINRSGKPEGGQASGSWLSQVKWVASDVFDSNSWAKELEGAVGVVSCIGAFGSNAFMERINGDANVLAVETAAKAGVPHFVYVSTVENNLPDFILK-GYFKGKKRAEEAVLKSFPGRKGMVLRPSFVYGTRQVGSLSLPLAAVGRPMELLFR-LPPFPSLRQTLPGTQALLAPPVSVQAVA 258 +IVV+GGSG+VG + +AA+++G +A+S++RSG+P SG W+ QV W+A DVF +N W + L GA V+S +G FGS+ M+RING+ANV+AV A G+P F+ +S E NLP F+L+ GYF GK++AE VL +P G+VLRP+F+YG R+V +PL +G P+E + R F +LP + LLAPPVSV VA Sbjct: 77 RIVVIGGSGFVGSAICKAAVSKGIEAISLSRSGRP---SYSGPWVDQVTWMAGDVFYAN-WDEVLVGATAVISTLGGFGSDEQMQRINGEANVVAVNAAKDYGIPKFILISVHEYNLPSFLLQSGYFTGKRKAESEVLSKYP-NSGVVLRPAFIYGKRKVDGFEIPLDLIGEPLEKILRATESFTKPLSSLPASDLLLAPPVSVDDVA 279
BLAST of NO19G01190 vs. NCBI_GenBank
Match: XP_009606585.1 (PREDICTED: uncharacterized protein At1g32220, chloroplastic isoform X2 [Nicotiana tomentosiformis] >XP_016473335.1 PREDICTED: uncharacterized protein At1g32220, chloroplastic-like isoform X2 [Nicotiana tabacum]) HSP 1 Score: 186.8 bits (473), Expect = 9.600e-44 Identity = 99/208 (47.60%), Postives = 140/208 (67.31%), Query Frame = 0 Query: 52 KIVVLGGSGYVGRHVLQAALNRGADAVSINRSGKPEGGQASGSWLSQVKWVASDVFDSNSWAKELEGAVGVVSCIGAFGSNAFMERINGDANVLAVETAAKAGVPHFVYVSTVENNLPDFILK-GYFKGKKRAEEAVLKSFPGRKGMVLRPSFVYGTRQVGSLSLPLAAVGRPMELLFR-LPPFPSLRQTLPGTQALLAPPVSVQAVA 258 +IVV+GGSG+VG + +AA+++G +A+S++RSG+P SG W+ QV W+A DVF +N W + L GA V+S +G FGS+ M+RING+ANV+AV A G+P F+ +S E NLP F+L+ GYF GK++AE VL +P G+VLRP+F+YG R+V +PL +G P+E + R F +LP + LLAPPVSV VA Sbjct: 74 RIVVIGGSGFVGSAICKAAVSKGIEAISLSRSGRP---SYSGPWVDQVTWMAGDVFYAN-WDEVLVGATAVISTLGGFGSDEQMQRINGEANVVAVNAAKDYGIPKFILISVHEYNLPSFLLQSGYFTGKRKAESEVLSKYP-NSGVVLRPAFIYGKRKVDGFEIPLDLIGEPLEKILRATESFTKPLSSLPASDLLLAPPVSVDDVA 276
BLAST of NO19G01190 vs. NCBI_GenBank
Match: KRH74352.1 (hypothetical protein GLYMA_01G014400 [Glycine max]) HSP 1 Score: 186.0 bits (471), Expect = 1.600e-43 Identity = 106/244 (43.44%), Postives = 149/244 (61.07%), Query Frame = 0 Query: 52 KIVVLGGSGYVGRHVLQAALNRGADAVSINRSGKPEGGQASGSWLSQVKWVASDVFDSNSWAKELEGAVGVVSCIGAFGSNAFMERINGDANVLAVETAAKAGVPHFVYVSTVENNLPDFIL-KGYFKGKKRAEEAVLKSFPGRKGMVLRPSFVYGTRQVGSLSLPLAAVGRPMELLFR-LPPFPSLRQTLPGTQALLAPPVSVQAVATVAAAGALGDGRVKEGEGEREGVLSVDDIVRLARIV 294 +IVVLGG+G+VG + +AA+++G + +S++RSG+P SG+W+ QV W++ DVF N W + L GA VVS +G FGS M+RING+ANV+AV A + G+P F+ +S + NLP F+L GYF GK++AE VL +P G+VLRP+F+YG R+V LPL VG P E + R + F +LP + LLAPPVSV VA G D + G+ ++D I A V Sbjct: 71 RIVVLGGNGFVGSSICKAAVSKGIEVISLSRSGRP---TYSGAWVDQVTWISGDVFYVN-WDEVLVGATAVVSTLGGFGSEEQMKRINGEANVVAVNAAKEYGIPKFILISVHDYNLPSFLLSSGYFTGKRKAESEVLSKYP-NSGIVLRPAFIYGKRRVDGFELPLDLVGEPAEKILRAVENFTKPLSSLPASDLLLAPPVSVDDVALAVINGVTDD--------DFFGIFTIDQIKEAANKV 301
BLAST of NO19G01190 vs. NCBI_GenBank
Match: XP_019424338.1 (PREDICTED: uncharacterized protein At1g32220, chloroplastic [Lupinus angustifolius] >OIV92979.1 hypothetical protein TanjilG_20641 [Lupinus angustifolius]) HSP 1 Score: 186.0 bits (471), Expect = 1.600e-43 Identity = 108/244 (44.26%), Postives = 149/244 (61.07%), Query Frame = 0 Query: 52 KIVVLGGSGYVGRHVLQAALNRGADAVSINRSGKPEGGQASGSWLSQVKWVASDVFDSNSWAKELEGAVGVVSCIGAFGSNAFMERINGDANVLAVETAAKAGVPHFVYVSTVENNLPDFIL-KGYFKGKKRAEEAVLKSFPGRKGMVLRPSFVYGTRQVGSLSLPLAAVGRPME-LLFRLPPFPSLRQTLPGTQALLAPPVSVQAVATVAAAGALGDGRVKEGEGEREGVLSVDDIVRLARIV 294 +IVVLGGSG+VG + +AA+++G + +S++RSG+P A W+ QV WV+ DVF+ N W + L GA VVS +G FGS M+RING+ANV+AV A + G+P F+ +S + NLP F+L GYF GK++AE VL +PG G+VLRP F+YG R+V +PL VG P E +L + F +LP + LLAPPVSV VA+ G D + GV ++D I A V Sbjct: 78 RIVVLGGSGFVGSAISKAAVSKGIEVISLSRSGRPTYPDA---WVDQVTWVSGDVFNVN-WDEVLVGATAVVSTLGGFGSEEQMKRINGEANVVAVNAAKEYGIPKFILISVHDYNLPQFLLTNGYFTGKRKAESEVLSKYPG-SGIVLRPGFIYGKRRVDGFEIPLDLVGEPAERILKAIENFTKPLSSLPASDLLLAPPVSVDDVASAVINGVTDD--------DFFGVFTIDQIKEAAEKV 308 The following BLAST results are available for this feature:
BLAST of NO19G01190 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO19G01190 ID=NO19G01190|Name=NO19G01190|organism=Nannochloropsis oceanica|type=gene|length=882bpback to top protein sequence of NO19G01190.1 >NO19G01190.1-protein ID=NO19G01190.1-protein|Name=NO19G01190.1|organism=Nannochloropsis oceanica|type=polypeptide|length=294bpback to top Synonyms
Publications
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