NO19G01080, NO19G01080 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO19G01080 vs. NCBI_GenBank
Match: EWM23613.1 (hypothetical protein Naga_101086g1 [Nannochloropsis gaditana]) HSP 1 Score: 209.9 bits (533), Expect = 2.100e-50 Identity = 116/203 (57.14%), Postives = 131/203 (64.53%), Query Frame = 0
Query: 40 MPRATEATPLNASDA------SHMNNGVELITEERFTSPQGRSILAFGLTVISVIFVLFIILTTLPHDHGKEKSSDPTTASPALKPISSHASPSXXXXXXXXXFDTAAVGSPINPHPRVNAPGCPSLGVPPPGRRFIQIKNNCQEPIWPGIIPAGSAVPPGNTWLWKAGECKTVEVASTLPSLRVWGRTQCNEDFNCVTGSCR 237
M A E TPLNA+ S E + EE TS GRSILAFG+TVISVIF LFIILT PH G+ SS P XXXXX DTA VGSP PH R+ A GCP L PPPG RF+QIKNNC E +W G+IPAG+AVPPGN+WLW+AGECKT+ V S+L SLRVWGRT C+ DFNC+TGSCR
Sbjct: 1 MVSARETTPLNAARTHPALTNSSPPGEEEYVFEESLTSTHGRSILAFGITVISVIFGLFIILTAWPHAAGQAGSSSFPPDGP--PXXXXXXXXXXXXXXSIPTVDTAVVGSPTRPHARLQASGCPPLAAPPPGHRFLQIKNNCNESLWLGVIPAGAAVPPGNSWLWEAGECKTLTVVSSLASLRVWGRTHCDADFNCLTGSCR 201
BLAST of NO19G01080 vs. NCBI_GenBank
Match: EWM21297.1 (hypothetical protein Naga_100997g1 [Nannochloropsis gaditana]) HSP 1 Score: 154.1 bits (388), Expect = 1.400e-33 Identity = 71/126 (56.35%), Postives = 87/126 (69.05%), Query Frame = 0
Query: 458 MKSLVCCDSGFRCSPYQPNNVPGGCPYAQACPTLGSSDPASSFHHKKG--VSDATYPQYDEEMRMSSSLPDWPMPTKGENYAQIYKESSPSAYAWQYND-ISSTYVCCGKEGQAGPSYILTFCPDE 581
M LVCC F SPYQPNN PGG YA ACPTLG+ DP S FH ++G D YPQ D+++RMSS PDWP+ T+ NYA YK+ +PS Y WQYND +S Y+CCG+EG+ P Y +TFCP+E
Sbjct: 1 MSDLVCCAGTFSWSPYQPNNGPGG-SYAMACPTLGAGDPKSPFHAERGGREPDVDYPQKDQQVRMSSPWPDWPLSTQNGNYAMQYKDRNPSVYVWQYNDGANSLYLCCGQEGKGSPHYKVTFCPEE 125
BLAST of NO19G01080 vs. NCBI_GenBank
Match: AUL79062.1 (hypothetical protein [Tupanvirus deep ocean]) HSP 1 Score: 109.0 bits (271), Expect = 5.000e-20 Identity = 114/443 (25.73%), Postives = 152/443 (34.31%), Query Frame = 0
Query: 153 NAPGCPSL---------GVPPPGRRFIQIKNNCQEPIWPGIIPAGSAVPPGNTWLWKAGECKTVEVASTLPSLRVWGRTQC----NEDFNCVTGSCRVEGNGGCVSAGEAPCSLWEATLQDHCTPKPVAGMGPDFFDTSLVDGYNLPIRAQPSGGF--NVGQVQ-GAFSCQAPVANTFDFDACPYELRVYSDSIPGTNLPVEGLAGKNQVTSPCFQTPLNATCRAAVIGCRSLCKALDQGWLGYYINNVEGPRDLVDPLLTRPTGETIRWSAQFIPQXXXXXXXXXXXXXXXXRKCDPTMLCRDVPAWGAYRGAAYAGNGNMKSLVC--CDSGFRCSPYQPNNVPGGCPYAQACPTLGSSDPASSFHHKKGVSDATYPQYDEEMRMSSSLPDWPMPTKGENYAQIYKESSPSAYAWQYNDISSTYVCCGKEGQAGPSYILTFC 578
N P C S VPP +R I++ NNC + IW + +P + + V S + R+WGRT C N C TG C G C G+ P SL E TL ++ PD++D SLVDGYNLPI P G NV G F+C +P +FD CP EL +I GT+ C S+C A++ + VE P +Y N N K+LVC CD G C PN G PY S+DP + ++ WP + + Y QI+K P AY+WQ++D SSTY C + Y +TFC
Sbjct: 201 NTPACTSYCNIYSGTNNNVPPKTQRTIKVTNNCPKKIWVATY-GQNYIPANGGFELGPHTSNNITVPSNWTAGRIWGRTGCVPGPNGALVCETGDC--NGKLNCTVTGQPPASLAEFTLSNNPNT-------PDYYDLSLVDGYNLPISITPIQGSYQNVNNPNLGKFNCGSPGCKSFDMSVCPSEL-----TIKGTDGTY----------------------------CASICTAVNNP------SKVEHP--------------------------------------------------------------SYLENIN-KALVCCSCDCGPNCGCDNPNCKYGCSPY--------STDP-------------------NAVGGKCNVNTWPKSSTNKQYNQIFKNQCPDAYSWQFDDQSSTYQCVNAD------YEVTFC 498
BLAST of NO19G01080 vs. NCBI_GenBank
Match: AUL77774.1 (hypothetical protein [Tupanvirus soda lake]) HSP 1 Score: 105.1 bits (261), Expect = 7.200e-19 Identity = 116/444 (26.13%), Postives = 149/444 (33.56%), Query Frame = 0
Query: 153 NAPGCPSL---------GVPPPGRRFIQIKNNCQEPIWPGIIPAGSAVPPGNTWLWKAGECKT-VEVASTLPSLRVWGRTQC----NEDFNCVTGSCRVEGNGGCVSAGEAPCSLWEATLQDHCTPKPVAGMGPDFFDTSLVDGYNLPIRAQPSGGF--NVGQVQ-GAFSCQAPVANTFDFDACPYELRVYSDSIPGTNLPVEGLAGKNQVTSPCFQTPLNATCRAAVIGCRSLCKALDQGWLGYYINNVEGPRDLVDPLLTRPTGETIRWSAQFIPQXXXXXXXXXXXXXXXXRKCDPTMLCRDVPAWGAYRGAAYAGNGNMKSLVC--CDSGFRCSPYQPNNVPGGCPYAQACPTLGSSDPASSFHHKKGVSDATYPQYDEEMRMSSSLPDWPMPTKGENYAQIYKESSPSAYAWQYNDISSTYVCCGKEGQAGPSYILTFC 578
N P C S VPP +R I++ N C + IW G G P N + T + V S + R+WGRT C N C TG C G C G+ P SL E TL + PD++D SLVDGYNLPI P G NV G F+C +P FD CP EL +I GT+ C S+C A V P + +P +Y N N K+LVC CD G C PN G PY S+DP + ++ WP + + Y QI+K P AY+WQ++D STY C + Y +TFC
Sbjct: 208 NTPACTSYCNIYSGTDHTVPPKTQRTIKVTNKCPKKIWVGTY--GQNYIPANGGFELGPQTSTNITVPSNWTAGRIWGRTGCIPGPNGTLVCETGDC--NGKLNCTVTGQPPASLAEFTLSNDLNI-------PDYYDLSLVDGYNLPISITPIQGSYQNVNNPNLGKFNCGSPGCKQFDMSQCPAEL-----TIKGTDGTY----------------------------CASICTA------------VNNPTKVENP--------------------------------------------------------SYLQNMN-KALVCCSCDCGPDCGCDNPNCKFGCSPY--------STDP-------------------NAVGGKCNVNTWPKSSTSKQYNQIFKNQCPDAYSWQFDDHGSTYQCVNAD------YEVTFC 505
BLAST of NO19G01080 vs. NCBI_GenBank
Match: PIC24272.1 (hypothetical protein B9Z55_017673 [Caenorhabditis nigoni]) HSP 1 Score: 102.1 bits (253), Expect = 6.100e-18 Identity = 65/163 (39.88%), Postives = 84/163 (51.53%), Query Frame = 0
Query: 168 RFIQIKNNCQEPIWPGIIPAGSAVPPGNTWLWKAGECKTVEVASTLPSLRVWGRTQCNEDFNCVTGSC--RVEGNGGCVSAGEAPCSLWEATLQDHCTPKPVAGMGPDFFDTSLVDGYNLPIRAQPSGGFNVGQVQGAFSCQAPVANTFDFDACPYELRVYSD 329
R I+I N C +WPGI+ G+ P G + AGE K++ V S R+W RT+C+ + NC TGSC R + NG + GE P SL E TL+ G DF+D SLVDGYN+P+ GG G + A C N DF CP +L V D
Sbjct: 17 REIKIYNKCPFTVWPGILGPGN--PNGGGFRLNAGETKSIYVDDGWKSARIWPRTECDGNMNCATGSCGPREQCNG---AGGEPPVSLAEFTLR--------GDAGKDFYDVSLVDGYNIPVLIDVIGG--EGDCKRAGGC---FKNINDF--CPGDLAVKRD 159
BLAST of NO19G01080 vs. NCBI_GenBank
Match: PIC24274.1 (hypothetical protein B9Z55_017675 [Caenorhabditis nigoni]) HSP 1 Score: 102.1 bits (253), Expect = 6.100e-18 Identity = 65/163 (39.88%), Postives = 84/163 (51.53%), Query Frame = 0
Query: 168 RFIQIKNNCQEPIWPGIIPAGSAVPPGNTWLWKAGECKTVEVASTLPSLRVWGRTQCNEDFNCVTGSC--RVEGNGGCVSAGEAPCSLWEATLQDHCTPKPVAGMGPDFFDTSLVDGYNLPIRAQPSGGFNVGQVQGAFSCQAPVANTFDFDACPYELRVYSD 329
R I+I N C +WPGI+ G+ P G + AGE K++ V S R+W RT+C+ + NC TGSC R + NG + GE P SL E TL+ G DF+D SLVDGYN+P+ GG G + A C N DF CP +L V D
Sbjct: 17 REIKIYNKCPFTVWPGILGPGN--PNGGGFRLNAGETKSIYVDDGWKSARIWPRTECDGNMNCATGSCGPREQCNG---AGGEPPVSLAEFTLR--------GDAGKDFYDVSLVDGYNIPVLIDVIGG--EGDCKRAGGC---FKNINDF--CPGDLAVKRD 159
BLAST of NO19G01080 vs. NCBI_GenBank
Match: OZF98063.1 (hypothetical protein FL82_04417, partial [Caenorhabditis remanei]) HSP 1 Score: 101.3 bits (251), Expect = 1.000e-17 Identity = 64/163 (39.26%), Postives = 83/163 (50.92%), Query Frame = 0
Query: 168 RFIQIKNNCQEPIWPGIIPAGSAVPPGNTWLWKAGECKTVEVASTLPSLRVWGRTQCNEDFNCVTGSC--RVEGNGGCVSAGEAPCSLWEATLQDHCTPKPVAGMGPDFFDTSLVDGYNLPIRAQPSGGFNVGQVQGAFSCQAPVANTFDFDACPYELRVYSD 329
R I+I N C +WPGI+ G P G + AGE +++ V S R+W RT+C+ + NC TGSC R + NG + GE P SL E TL+ G DF+D SLVDGYN+P+ GG G + A C N DF CP +L V D
Sbjct: 20 REIKIFNKCPFTVWPGIL--GPGTPEGGGFKLNAGETRSIYVDDGWKSARIWPRTECDGNMNCATGSCGPREQCNG---AGGEPPVSLAEFTLR--------GADGKDFYDVSLVDGYNIPVLIDVIGG--EGDCKRAGGC---FKNINDF--CPEDLAVKRD 162
BLAST of NO19G01080 vs. NCBI_GenBank
Match: NP_500748.2 (THaumatiN family [Caenorhabditis elegans] >CCD70692.1 THaumatiN family [Caenorhabditis elegans]) HSP 1 Score: 100.9 bits (250), Expect = 1.400e-17 Identity = 67/172 (38.95%), Postives = 86/172 (50.00%), Query Frame = 0
Query: 159 SLGVPPPGRRFIQIKNNCQEPIWPGIIPAGSAVPPGNTWLWKAGECKTVEVASTLPSLRVWGRTQCNEDFNCVTGSC--RVEGNGGCVSAGEAPCSLWEATLQDHCTPKPVAGMGPDFFDTSLVDGYNLPIRAQPSGGFNVGQVQGAFSCQAPVANTFDFDACPYELRVYSD 329
SL V P R I+I N C W GI+ G+ P G + AGE +++ V S R+W RT C+ + NC TG+C R + NG + GE P SL E TL+ G DF+D SLVDGYN+P+ P GG G + A C N DF CP +L V D
Sbjct: 11 SLFVIPSLSREIKIYNKCPFTTWAGILGPGN--PEGGGFRLNAGEARSIYVDDGWKSARIWPRTDCDGNMNCATGNCGRREQCNG---AGGEPPASLAEFTLR--------GADGKDFYDVSLVDGYNIPVLIDPYGG--EGDCRRAGGC---FKNINDF--CPGDLAVRKD 162
BLAST of NO19G01080 vs. NCBI_GenBank
Match: EGT38566.1 (hypothetical protein CAEBREN_01562 [Caenorhabditis brenneri]) HSP 1 Score: 100.9 bits (250), Expect = 1.400e-17 Identity = 62/163 (38.04%), Postives = 82/163 (50.31%), Query Frame = 0
Query: 168 RFIQIKNNCQEPIWPGIIPAGSAVPPGNTWLWKAGECKTVEVASTLPSLRVWGRTQCNEDFNCVTGSC--RVEGNGGCVSAGEAPCSLWEATLQDHCTPKPVAGMGPDFFDTSLVDGYNLPIRAQPSGGFNVGQVQGAFSCQAPVANTFDFDACPYELRVYSD 329
R I+I N C WPGI+ G+ P G + AGE K++ V + R+W RT+C+ + NC TGSC R + G + GE P SL E TL+ H G DF+D SLVDGYN+P+ GG G + A C + D CP +L V D
Sbjct: 19 REIKIYNKCPFTTWPGILGPGN--PAGGGFRLNAGETKSIHVDDAWKAGRIWPRTECDGNMNCATGSCGPREQCQG---AGGEPPASLAEFTLRGH--------EGLDFYDVSLVDGYNIPVLIDVQGG--QGDCKRAGGCIKNIN-----DICPGDLAVKKD 161
BLAST of NO19G01080 vs. NCBI_GenBank
Match: POM45340.1 (hypothetical protein FL81_05087 [Caenorhabditis remanei]) HSP 1 Score: 100.9 bits (250), Expect = 1.400e-17 Identity = 64/163 (39.26%), Postives = 83/163 (50.92%), Query Frame = 0
Query: 168 RFIQIKNNCQEPIWPGIIPAGSAVPPGNTWLWKAGECKTVEVASTLPSLRVWGRTQCNEDFNCVTGSC--RVEGNGGCVSAGEAPCSLWEATLQDHCTPKPVAGMGPDFFDTSLVDGYNLPIRAQPSGGFNVGQVQGAFSCQAPVANTFDFDACPYELRVYSD 329
R I+I N C +WPGI+ G P G + AGE +++ V S R+W RT+C+ + NC TGSC R + NG + GE P SL E TL+ G DF+D SLVDGYN+P+ GG G + A C N DF CP +L V D
Sbjct: 20 REIKIFNKCPFTVWPGIL--GPGTPEGGGFKLNAGETRSIYVDDGWKSARIWPRTECDGNMNCATGSCGPREQCNG---AGGEPPVSLAEFTLR--------GADGKDFYDVSLVDGYNIPVLIDVIGG--EGDCKRAGGC---FKNINDF--CPGDLAVKRD 162 The following BLAST results are available for this feature:
BLAST of NO19G01080 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
The following polypeptide feature(s) derives from this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO19G01080 ID=NO19G01080|Name=NO19G01080|organism=Nannochloropsis oceanica|type=gene|length=4197bpback to top protein sequence of NO19G01080.4 >NO19G01080.4-protein ID=NO19G01080.4-protein|Name=NO19G01080.4|organism=Nannochloropsis oceanica|type=polypeptide|length=471bpback to top protein sequence of NO19G01080.3 >NO19G01080.3-protein ID=NO19G01080.3-protein|Name=NO19G01080.3|organism=Nannochloropsis oceanica|type=polypeptide|length=471bpback to top protein sequence of NO19G01080.2 >NO19G01080.2-protein ID=NO19G01080.2-protein|Name=NO19G01080.2|organism=Nannochloropsis oceanica|type=polypeptide|length=520bpback to top protein sequence of NO19G01080.1 >NO19G01080.1-protein ID=NO19G01080.1-protein|Name=NO19G01080.1|organism=Nannochloropsis oceanica|type=polypeptide|length=581bpback to top Synonyms
Publications
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