NO19G00890, NO19G00890 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO19G00890 vs. NCBI_GenBank
Match: XP_002127570.1 (PREDICTED: G1/S-specific cyclin-E1 isoform X1 [Ciona intestinalis]) HSP 1 Score: 110.2 bits (274), Expect = 2.900e-20 Identity = 69/210 (32.86%), Postives = 108/210 (51.43%), Query Frame = 0 Query: 157 TYEHRQIELRPDMRAQLLDWLMEVSANFFVRRRTFQAAVNYCDRFLSTVAVVFPKEKLQLLAITSLFVSSKMEEVYPAKAQELAEATAGAFTACDIVTFEIELMTSLAWNLTPPTSDDWAEWYLLAFLERGIPVAASAFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFQRLPTGVALRLQLLLDLALLDVTSLHFYPSMLAAAGLY 367 +Y R +L+P MR+ L+DW+MEV + + R TF AV+Y DR+LS + K +LQL+ +T+LF+++K+EE+YP K + A T GA T +I++ E+ ++T+L W+L+P T+ W YL P +SA + P + + LLDL +LD+ SL F +LAA+ LY Sbjct: 185 SYMDRHADLQPRMRSILIDWIMEVCEVYSLHRETFYLAVDYIDRYLSATKNIH-KTRLQLVGVTALFIAAKLEEIYPPKLSDFAYVTDGACTDDEILSQELIMLTALKWSLSPITAISWLNVYLQTAHAAFAPNPSSA------------------------------SFFLPQYPQETFVHISQLLDLCVLDIESLEFSSGLLAASALY 363
BLAST of NO19G00890 vs. NCBI_GenBank
Match: XP_002127620.1 (PREDICTED: G1/S-specific cyclin-E1 isoform X2 [Ciona intestinalis]) HSP 1 Score: 110.2 bits (274), Expect = 2.900e-20 Identity = 69/210 (32.86%), Postives = 108/210 (51.43%), Query Frame = 0 Query: 157 TYEHRQIELRPDMRAQLLDWLMEVSANFFVRRRTFQAAVNYCDRFLSTVAVVFPKEKLQLLAITSLFVSSKMEEVYPAKAQELAEATAGAFTACDIVTFEIELMTSLAWNLTPPTSDDWAEWYLLAFLERGIPVAASAFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFQRLPTGVALRLQLLLDLALLDVTSLHFYPSMLAAAGLY 367 +Y R +L+P MR+ L+DW+MEV + + R TF AV+Y DR+LS + K +LQL+ +T+LF+++K+EE+YP K + A T GA T +I++ E+ ++T+L W+L+P T+ W YL P +SA + P + + LLDL +LD+ SL F +LAA+ LY Sbjct: 183 SYMDRHADLQPRMRSILIDWIMEVCEVYSLHRETFYLAVDYIDRYLSATKNIH-KTRLQLVGVTALFIAAKLEEIYPPKLSDFAYVTDGACTDDEILSQELIMLTALKWSLSPITAISWLNVYLQTAHAAFAPNPSSA------------------------------SFFLPQYPQETFVHISQLLDLCVLDIESLEFSSGLLAASALY 361
BLAST of NO19G00890 vs. NCBI_GenBank
Match: XP_020510264.1 (G1/S-specific cyclin-E2-like [Labrus bergylta]) HSP 1 Score: 109.4 bits (272), Expect = 4.900e-20 Identity = 61/138 (44.20%), Postives = 84/138 (60.87%), Query Frame = 0 Query: 142 FLKLREAEVQNAPDPTYEHRQIELRPDMRAQLLDWLMEVSANFFVRRRTFQAAVNYCDRFLSTVAVVFPKEKLQLLAITSLFVSSKMEEVYPAKAQELAEATAGAFTACDIVTFEIELMTSLAWNLTPPTSDDWAEWY 280 ++K+ E++ D +Y + +L+P MRA LLDWL+EVS + + R+T A +Y DRF+ T + KE LQL+ IT+LFV+SKMEE+YP K E A T GA DI E+ L+ SL WNL P T W + Y Sbjct: 143 WIKMLNKELKYVHDKSYLQKNPKLQPKMRAILLDWLLEVSEVYSLHRQTAYLAQDYFDRFMLTQEDI-SKEYLQLIGITALFVASKMEEIYPPKIAEFAYVTDGACDMWDIQQTELHLLKSLDWNLCPETPISWLKLY 279
BLAST of NO19G00890 vs. NCBI_GenBank
Match: AGS58210.1 (G1/S-specific cyclin-E1 [Clarias batrachus]) HSP 1 Score: 108.6 bits (270), Expect = 8.300e-20 Identity = 74/207 (35.75%), Postives = 106/207 (51.21%), Query Frame = 0 Query: 161 RQIELRPDMRAQLLDWLMEVSANFFVRRRTFQAAVNYCDRFLSTVAVVFPKEKLQLLAITSLFVSSKMEEVYPAKAQELAEATAGAFTACDIVTFEIELMTSLAWNLTPPTSDDWAEWYL-LAFLERGIPVAASAFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFQRLPTGVALRLQLLLDLALLDVTSLHFYPSMLAAAGLY 367 R L+P MRA LLDWL+EV + + R TF A +Y DRF+ST V K LQL+ I++LF+++KMEE+YP K + A T GA T +I++ E+ +M L W+L+P T W Y+ +A+L+ V A F P +++ LLDL +LDV SL F S+LAA+ L+ Sbjct: 130 RHPNLQPKMRAILLDWLIEVCEVYKLHRETFYLAQDYFDRFMSTQKNV-QKTTLQLIGISALFIAAKMEEIYPPKVHQFAYVTDGACTEEEILSMEVIIMKELNWSLSPLTPVSWLNIYMQMAYLKEVTEVLAPQF------------------------------------PQNTFVQIAELLDLCVLDVRSLEFSSSLLAASALF 299
BLAST of NO19G00890 vs. NCBI_GenBank
Match: KMQ96215.1 (g1 s-specific cyclin-e [Lasius niger]) HSP 1 Score: 108.2 bits (269), Expect = 1.100e-19 Identity = 100/332 (30.12%), Postives = 149/332 (44.88%), Query Frame = 0 Query: 155 DPTYEHRQIELRPDMRAQLLDWLMEVSANFFVRRRTFQAAVNYCDRFLSTVAVVFPKEKLQLLAITSLFVSSKMEEVYPAKAQELAEATAGAFTACDIVTFEIELMTSLAWNLTPPTSDDWAEWYLLAFLERGIPVAASAFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFQRLPTGVALRLQLLLDLALLDVTSLHFYPSMLAAAGLYLLLPHSFHPALAFATGYQPGDRALKHCKAYLTFLSTGLFDALPPLHDQQHQHQSFWTTVVSPRAQAAQVLVP---MWDRHSLQNHPANLLPHLLGRITAISGHGDDTNLCKNSDCNIKSG 484 DP R L+P MRA LLDWL+EV + + R T+ A++Y DR+LS + PK +LQL+ IT LF++SK+EE+YP K + A T GA T +I+ E+ ++ L WNL+P T+ W Y+ +E G + F + L A + LLDLA LD L F S +AAA +Y H+ A ++ L C +LT +T + + D Q +S T V S + VP + + H +Q H +L ++L + G + +SD NI+SG Sbjct: 138 DPEMFQRHPTLQPRMRAILLDWLIEVCEVYKLHRETYYLAMDYIDRYLS-IHHDLPKNQLQLIGITCLFIASKVEEIYPPKIADFAYVTDGACTEEEILGKELIILKGLGWNLSPITAPGWLNIYMQ--IESGDSSRPNTF----------------------------IYPQYGGLQYSQAAQ---LLDLATLDEGCLKFPYSHIAAAAIY----HTQGRECALKVSRLSWEQ-LAPCVKWLTAFATTVAE-----EDSQSLLRSTITPVESHSGSGLKATVPNIVVDESHRIQTHVVDL--NMLEKAQQRLAGGIPSGYANDSDTNIESG 423
BLAST of NO19G00890 vs. NCBI_GenBank
Match: XP_017341625.1 (PREDICTED: G1/S-specific cyclin-E2-like [Ictalurus punctatus]) HSP 1 Score: 108.2 bits (269), Expect = 1.100e-19 Identity = 58/138 (42.03%), Postives = 85/138 (61.59%), Query Frame = 0 Query: 142 FLKLREAEVQNAPDPTYEHRQIELRPDMRAQLLDWLMEVSANFFVRRRTFQAAVNYCDRFLSTVAVVFPKEKLQLLAITSLFVSSKMEEVYPAKAQELAEATAGAFTACDIVTFEIELMTSLAWNLTPPTSDDWAEWY 280 ++K+ E++ D T+ + L+P MRA LLDWL+EVS + + R TF A ++ DRF+ T V K +LQL+ ITSLFV+SK+EE+YP K QE A T GA +I+ E+ ++ +L W+L P T W + Y Sbjct: 104 WIKMLNKELKYIHDKTFMQQHPSLQPKMRAILLDWLLEVSEVYTLHRETFYLAQDFFDRFMLT-QVAIGKNQLQLIGITSLFVASKLEEIYPPKLQEFAYVTDGACDEDEILEMELIMLKALNWHLCPETPISWLKLY 240
BLAST of NO19G00890 vs. NCBI_GenBank
Match: XP_021396756.1 (G1/S-specific cyclin-E1 isoform X1 [Lonchura striata domestica] >OWK58146.1 G1/S-specific cyclin-E1 [Lonchura striata domestica]) HSP 1 Score: 108.2 bits (269), Expect = 1.100e-19 Identity = 92/303 (30.36%), Postives = 141/303 (46.53%), Query Frame = 0 Query: 155 DPTYEHRQIELRPDMRAQLLDWLMEVSANFFVRRRTFQAAVNYCDRFLSTVAVVFPKEKLQLLAITSLFVSSKMEEVYPAKAQELAEATAGAFTACDIVTFEIELMTSLAWNLTPPTSDDWAEWYL-LAFLERGIPVAASAFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFQRLPTGVALRLQLLLDLALLDVTSLHFYPSMLAAAGLYLLLPHSFHPALAFATGYQPGDRALKHCKAYLTFLSTGL----------FDALPP--LHDQQHQHQSFWTTVVSPRAQAAQVLVPMWDRHS 445 D Y R +L+P MRA LLDWLMEV + + R TF A ++ DRF++T V K LQL+ +TSLF+++K+EE+YP K + A T GA T +I++ E+ +M +L WNL P T W YL +A+L V + P + +++ LLDL +LD+ L + +LAA+ LY S + +GY+ + ++ C ++ + L F +PP LH+ Q SF + RAQA Q ++ +R S Sbjct: 104 DKFYLQRHPQLQPKMRAVLLDWLMEVCEAYKLHRETFYLAQDFFDRFMATQQDVV-KTLLQLIGVTSLFIAAKLEEIYPPKLHQFAYVTDGACTEDEIISMELIIMKALNWNLNPLTVVSWLNIYLQVAYLNDLYEVMLPQY------------------------------------PQQIFVQITELLDLCVLDIGWLEYTYGILAASALY---HFSSSELMQKVSGYEFCE--IEDCVKWMVPFAMALREVGSSKLKHFSGIPPEDLHNIQIHINSF---DLLDRAQAKQAILAEQNRTS 361
BLAST of NO19G00890 vs. NCBI_GenBank
Match: XP_012426363.1 (PREDICTED: G1/S-specific cyclin-E1 [Taeniopygia guttata]) HSP 1 Score: 107.8 bits (268), Expect = 1.400e-19 Identity = 91/303 (30.03%), Postives = 140/303 (46.20%), Query Frame = 0 Query: 155 DPTYEHRQIELRPDMRAQLLDWLMEVSANFFVRRRTFQAAVNYCDRFLSTVAVVFPKEKLQLLAITSLFVSSKMEEVYPAKAQELAEATAGAFTACDIVTFEIELMTSLAWNLTPPTSDDWAEWYL-LAFLERGIPVAASAFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFQRLPTGVALRLQLLLDLALLDVTSLHFYPSMLAAAGLYLLLPHSFHPALAFATGYQPGDRALKHCKAYLTFLSTGL----------FDALPP--LHDQQHQHQSFWTTVVSPRAQAAQVLVPMWDRHS 445 D Y R +L+P MR LLDWLMEV + + R TF A ++ DRF++T V K LQL+ +TSLF+++K+EE+YP K + A T GA T +I++ E+ +M +L WNL P T W YL +A+L V + P + +++ LLDL +LD+ L + +LAA+ LY S + +GY+ + ++ C ++ + L F +PP LH+ Q SF + RAQA Q ++ +R S Sbjct: 104 DKFYLQRHPQLQPKMRTVLLDWLMEVCEAYKLHRETFYLAQDFFDRFMATQQDVV-KTLLQLIGVTSLFIAAKLEEIYPPKLHQFAYVTDGACTEDEIISMELIIMKALNWNLNPLTVVSWLNIYLQVAYLNDLYEVMLPQY------------------------------------PQQIFVQITELLDLCVLDIGCLEYTYGILAASALY---HFSSSELMQKVSGYEFCE--IEDCVKWMVPFAMALREVGSSKLKHFSGIPPEDLHNIQMHINSF---DLLDRAQAKQAILAEQNRTS 361
BLAST of NO19G00890 vs. NCBI_GenBank
Match: XP_020333416.1 (G1/S-specific cyclin-E1-like [Oncorhynchus kisutch] >XP_020333424.1 G1/S-specific cyclin-E1-like [Oncorhynchus kisutch]) HSP 1 Score: 107.8 bits (268), Expect = 1.400e-19 Identity = 73/203 (35.96%), Postives = 103/203 (50.74%), Query Frame = 0 Query: 165 LRPDMRAQLLDWLMEVSANFFVRRRTFQAAVNYCDRFLSTVAVVFPKEKLQLLAITSLFVSSKMEEVYPAKAQELAEATAGAFTACDIVTFEIELMTSLAWNLTPPTSDDWAEWYL-LAFLERGIPVAASAFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFQRLPTGVALRLQLLLDLALLDVTSLHFYPSMLAAAGLY 367 L+P MRA LLDWL+EV + + R TF A +Y DRF++T + VF K LQL+ I+SLF+++KMEE+YP K + A T GA T DI+ E+ +M L W L+P TS W Y+ +A+L V + P +++ LLDL +LDV SL F +LAA+ L+ Sbjct: 142 LQPKMRAILLDWLIEVCEVYKLHRETFYLAQDYFDRFMATQSNVF-KSTLQLIGISSLFIAAKMEEIYPPKVHQFAYVTDGACTEDDILCMELIIMKELKWRLSPLTSVSWLNIYMQIAYLRESEEVLIPQY------------------------------------PQTTFVQIAELLDLCVLDVKSLEFCYGVLAASALF 307
BLAST of NO19G00890 vs. NCBI_GenBank
Match: XP_024274469.1 (G1/S-specific cyclin-E1-like [Oncorhynchus tshawytscha] >XP_024274470.1 G1/S-specific cyclin-E1-like [Oncorhynchus tshawytscha]) HSP 1 Score: 107.8 bits (268), Expect = 1.400e-19 Identity = 73/203 (35.96%), Postives = 103/203 (50.74%), Query Frame = 0 Query: 165 LRPDMRAQLLDWLMEVSANFFVRRRTFQAAVNYCDRFLSTVAVVFPKEKLQLLAITSLFVSSKMEEVYPAKAQELAEATAGAFTACDIVTFEIELMTSLAWNLTPPTSDDWAEWYL-LAFLERGIPVAASAFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFQRLPTGVALRLQLLLDLALLDVTSLHFYPSMLAAAGLY 367 L+P MRA LLDWL+EV + + R TF A +Y DRF++T VF K LQL+ I+SLF+++KMEE+YP K + A T GA T DI+ E+ +M L W L+P TS W Y+ +A+L+ V + P +++ LLDL +LDV SL F +LAA+ L+ Sbjct: 142 LQPKMRAILLDWLIEVCEVYKLHRETFYLAQDYFDRFMATQTNVF-KSTLQLIGISSLFIAAKMEEIYPPKVHQFAYVTDGACTEDDILCMELIIMKELKWRLSPLTSVSWLNIYMQIAYLKESEEVLIPQY------------------------------------PQTTFVQIAELLDLCVLDVKSLEFCYGVLAASALF 307 The following BLAST results are available for this feature:
BLAST of NO19G00890 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO19G00890 ID=NO19G00890|Name=NO19G00890|organism=Nannochloropsis oceanica|type=gene|length=2281bpback to top protein sequence of NO19G00890.1 >NO19G00890.1-protein ID=NO19G00890.1-protein|Name=NO19G00890.1|organism=Nannochloropsis oceanica|type=polypeptide|length=737bpback to top Synonyms
Publications
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