NO19G00890, NO19G00890 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO19G00890 vs. NCBI_GenBank
Match: EWM23597.1 (g1 s-specific cyclin-e [Nannochloropsis gaditana]) HSP 1 Score: 497.7 bits (1280), Expect = 6.400e-137 Identity = 374/739 (50.61%), Postives = 436/739 (59.00%), Query Frame = 0 Query: 58 ETCGDSTLAAACDETLDEEELETFAICTVPIPCSSSSSRYSYRATTTMITSNHQPCRSAYYQKIGLALPPEVTLHNMKHYGRRHFLKLREAEVQ-NAPDPTYEHRQIELRPDMRAQLLDWLMEVSANFFVRRRTFQAAVNYCDRFLSTVAVVFPKEKLQLLAITSLFVSSKMEEVYPAKAQELAEATAGAFTACDIVTFEIELMTSLAWNLTPPTSDDWAEWYLLAFLERGIPVAASAFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFQRLPTGVALRLQLLLDLALLDVTSLHFYPSMLAAAGLYLLLPHSFHPALAFATGYQPGDRALKHCKAYLTFLSTGLFDALPPL-----------HDQQHQHQSFWTTVVSPRAQAAQVLVPMWDRHSLQNHPANLLPHLLGRITAISGHGDDT------------NLCKNSDCNIKSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFLGYRSVFSGNSLMKEKE-------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDFFGHSLELHDDW-----GYTTKKNICERVEKQGRREGEDYSCDHVLRLEELGGDGSENELGWSMATTMDPQTTRDSIVSFFPSEEKEKGEDG----------VEVDGWME--REERRXXXXXXXXXXXXXXMRGKPWNDGTSSPCLASFFFPHDVVSSS 737 + C DS LAAAC ETL+ E+LE A C + S YS + +P RS++Y K GL LPP+VTLHNMKHYGRRHFLK+RE+E+ A DP YE RQIELRPDMRAQL+DWLMEV ANF V RRTFQAAVN+CDR+LS A FPK++LQLLAIT+LFV++KM+EVYP KA +LAEATAGAF A D+V FE +L+T+L+WNLTPPT DDWAEWY LAFLERG+P AA+ Q LPTG+A ++Q+LLDLALLDVTS+HF+PSMLAAA LY+LLP F+PALA ATGY P D+AL+HCKAYLTFL+TGLFD+ PL H Q Q ++AAQ VP+WD+HSLQ+HP+ LLPHLLGRI+AIS H DD N N + XXXXXXXXXXXXXXXXXXX FLGYRSV S N + K XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX FGHSLELH++W G K C + +GR G LRLE L G+ SENELGWSMATT+DPQTTRDS+ SFF E E G+DG E+ GW RE + N SSPCL F P + +S Sbjct: 6 KACEDSVLAAACHETLEMEDLEALATC--------AKSTYSGDVGGDTWIQSRRPSRSSFYLKTGLFLPPDVTLHNMKHYGRRHFLKMRESEMHIYACDPCYEERQIELRPDMRAQLVDWLMEVCANFSVHRRTFQAAVNHCDRYLSLCARGFPKQRLQLLAITALFVAAKMDEVYPPKAHDLAEATAGAFHARDLVVFEQDLLTTLSWNLTPPTPDDWAEWYFLAFLERGLPAAATEM--------------KAASAPSLSQQDLSSLALLQHLPTGIAQKVQVLLDLALLDVTSIHFFPSMLAAAALYVLLPPVFYPALALATGYPPNDKALEHCKAYLTFLATGLFDSSLPLQALPLSRRHLQHGQPGQRAGGGFGWTPEASEAAQSGVPLWDKHSLQSHPSRLLPHLLGRISAISDHCDDLPPPPPHAPKTQGAQADNPAGNAAALATSSLSPPCXXXXXXXXXXXXXXXXXXXLADLVTPIHAKARLLSPLPSFLGYRSVSSKNLIAGRKGRCDEWEDGEAMFMETLEMWPMDESENGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIFGHSLELHEEWESGRRGRERKAGRCGLGQDKGRGAG-----PQSLRLEALDGEASENELGWSMATTVDPQTTRDSVFSFFSLEGTEGGQDGGHGLGSGRGSEEMLGWQHEVRERFGEDCTNTQESCGEGEELEEMRNVALSSPCLTPIFCPDEAKVAS 717
BLAST of NO19G00890 vs. NCBI_GenBank
Match: XP_012688930.1 (PREDICTED: G1/S-specific cyclin-E2-like [Clupea harengus]) HSP 1 Score: 111.7 bits (278), Expect = 9.800e-21 Identity = 74/222 (33.33%), Postives = 112/222 (50.45%), Query Frame = 0 Query: 142 FLKLREAEVQNAPDPTYEHRQIELRPDMRAQLLDWLMEVSANFFVRRRTFQAAVNYCDRFLSTVAVVFPKEKLQLLAITSLFVSSKMEEVYPAKAQELAEATAGAFTACDIVTFEIELMTSLAWNLTPPTSDDWAEWYLLAFLERGIPVAASAFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFQRLPTGVALRLQLLLDLALLDVTSLHFYPSMLAAA 364 ++K+ E++ + D + R L+P MRA LLDWLMEVS + + R TF A ++ DRF+ T + + PK +LQL+ IT+LF+++KMEE+YP K QE A T GA +I+ E+ ++ +L W L P T+ W + Y R P + P V +++ LLDL +LD+ SL F+ +LAAA Sbjct: 106 WIKMLNKELKYSHDKSLMERHPNLQPKMRAILLDWLMEVSEAYSLHRETFYLAQDFFDRFMLTQSDL-PKNQLQLIGITALFIAAKMEEIYPPKLQEFAYVTDGACEEEEILGMELIVLKALKWELCPETAISWLKLYAQVDSLRDGP-----------------------------------NFLIPQFPQEVFIQITQLLDLCVLDINSLEFHYGVLAAA 291
BLAST of NO19G00890 vs. NCBI_GenBank
Match: XP_015928485.1 (G1/S-specific cyclin-E1 [Parasteatoda tepidariorum]) HSP 1 Score: 111.7 bits (278), Expect = 9.800e-21 Identity = 74/206 (35.92%), Postives = 107/206 (51.94%), Query Frame = 0 Query: 161 RQIELRPDMRAQLLDWLMEVSANFFVRRRTFQAAVNYCDRFLSTVAVVFPKEKLQLLAITSLFVSSKMEEVYPAKAQELAEATAGAFTACDIVTFEIELMTSLAWNLTPPTSDDWAEWYL-LAFLERGIPVAASAFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFQRLPTGVALRLQLLLDLALLDVTSLHFYPSMLAAAGL 366 R +L P MR+ L+DWL EV F + R TF A++Y DRFL + + P+ LQLL T+LFV+SKMEE+YPAK ++ A T GA DI+ E+ L+ +L WNL+P T + W ++ LAFLE G + +R P + L++ +LDL +LD+ SL F S+L A+ + Sbjct: 129 RHPDLEPRMRSILIDWLSEVCEVFRIHRETFHLAIDYVDRFLMAKSNL-PRNYLQLLGATALFVASKMEEIYPAKLEQFAYVTDGACADTDILNQELILIMTLNWNLSPVTMNCWLNIFMQLAFLENGENLIGP-----------------------------------ERYPRKLFLQISQVLDLCVLDIESLRFPYSVLCASAI 298
BLAST of NO19G00890 vs. NCBI_GenBank
Match: XP_005089821.1 (PREDICTED: G1/S-specific cyclin-E1-like isoform X1 [Aplysia californica]) HSP 1 Score: 110.5 bits (275), Expect = 2.200e-20 Identity = 74/203 (36.45%), Postives = 105/203 (51.72%), Query Frame = 0 Query: 164 ELRPDMRAQLLDWLMEVSANFFVRRRTFQAAVNYCDRFLSTVAVVFPKEKLQLLAITSLFVSSKMEEVYPAKAQELAEATAGAFTACDIVTFEIELMTSLAWNLTPPTSDDWAEWYLLAFLERGIPVAASAFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFQRLPTGVALRLQLLLDLALLDVTSLHFYPSMLAAAGLY 367 EL+P MR+ LLDWL EV + + + TF AV+Y DR+LS V V PK +LQLL I+SLF+++K+EE+YP K E A T A T DIV E+ ++ +L W+L+P T++ W YL I F F + T +++ L DLAL+DV S FY +++AA+ LY Sbjct: 156 ELQPRMRSILLDWLSEVCEVYRLHKETFTLAVDYLDRYLSVVDNV-PKTQLQLLGISSLFIAAKLEEIYPPKLSEFAYVTDSACTEADIVRQEMIILKALKWDLSPMTTNAWLGVYLQVANMDHITDPELGF-------------------------------VFPQFSTHAFVQISRLCDLALMDVGSFKFYRNVIAASALY 326
BLAST of NO19G00890 vs. NCBI_GenBank
Match: XP_012938100.1 (PREDICTED: G1/S-specific cyclin-E1-like isoform X2 [Aplysia californica]) HSP 1 Score: 110.5 bits (275), Expect = 2.200e-20 Identity = 74/203 (36.45%), Postives = 105/203 (51.72%), Query Frame = 0 Query: 164 ELRPDMRAQLLDWLMEVSANFFVRRRTFQAAVNYCDRFLSTVAVVFPKEKLQLLAITSLFVSSKMEEVYPAKAQELAEATAGAFTACDIVTFEIELMTSLAWNLTPPTSDDWAEWYLLAFLERGIPVAASAFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFQRLPTGVALRLQLLLDLALLDVTSLHFYPSMLAAAGLY 367 EL+P MR+ LLDWL EV + + + TF AV+Y DR+LS V V PK +LQLL I+SLF+++K+EE+YP K E A T A T DIV E+ ++ +L W+L+P T++ W YL I F F + T +++ L DLAL+DV S FY +++AA+ LY Sbjct: 149 ELQPRMRSILLDWLSEVCEVYRLHKETFTLAVDYLDRYLSVVDNV-PKTQLQLLGISSLFIAAKLEEIYPPKLSEFAYVTDSACTEADIVRQEMIILKALKWDLSPMTTNAWLGVYLQVANMDHITDPELGF-------------------------------VFPQFSTHAFVQISRLCDLALMDVGSFKFYRNVIAASALY 319
BLAST of NO19G00890 vs. NCBI_GenBank
Match: XP_012938101.1 (PREDICTED: G1/S-specific cyclin-E1-like isoform X3 [Aplysia californica]) HSP 1 Score: 110.5 bits (275), Expect = 2.200e-20 Identity = 74/203 (36.45%), Postives = 105/203 (51.72%), Query Frame = 0 Query: 164 ELRPDMRAQLLDWLMEVSANFFVRRRTFQAAVNYCDRFLSTVAVVFPKEKLQLLAITSLFVSSKMEEVYPAKAQELAEATAGAFTACDIVTFEIELMTSLAWNLTPPTSDDWAEWYLLAFLERGIPVAASAFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFQRLPTGVALRLQLLLDLALLDVTSLHFYPSMLAAAGLY 367 EL+P MR+ LLDWL EV + + + TF AV+Y DR+LS V V PK +LQLL I+SLF+++K+EE+YP K E A T A T DIV E+ ++ +L W+L+P T++ W YL I F F + T +++ L DLAL+DV S FY +++AA+ LY Sbjct: 147 ELQPRMRSILLDWLSEVCEVYRLHKETFTLAVDYLDRYLSVVDNV-PKTQLQLLGISSLFIAAKLEEIYPPKLSEFAYVTDSACTEADIVRQEMIILKALKWDLSPMTTNAWLGVYLQVANMDHITDPELGF-------------------------------VFPQFSTHAFVQISRLCDLALMDVGSFKFYRNVIAASALY 317
BLAST of NO19G00890 vs. NCBI_GenBank
Match: XP_012938107.1 (PREDICTED: G1/S-specific cyclin-E1-like isoform X4 [Aplysia californica]) HSP 1 Score: 110.5 bits (275), Expect = 2.200e-20 Identity = 74/203 (36.45%), Postives = 105/203 (51.72%), Query Frame = 0 Query: 164 ELRPDMRAQLLDWLMEVSANFFVRRRTFQAAVNYCDRFLSTVAVVFPKEKLQLLAITSLFVSSKMEEVYPAKAQELAEATAGAFTACDIVTFEIELMTSLAWNLTPPTSDDWAEWYLLAFLERGIPVAASAFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFQRLPTGVALRLQLLLDLALLDVTSLHFYPSMLAAAGLY 367 EL+P MR+ LLDWL EV + + + TF AV+Y DR+LS V V PK +LQLL I+SLF+++K+EE+YP K E A T A T DIV E+ ++ +L W+L+P T++ W YL I F F + T +++ L DLAL+DV S FY +++AA+ LY Sbjct: 126 ELQPRMRSILLDWLSEVCEVYRLHKETFTLAVDYLDRYLSVVDNV-PKTQLQLLGISSLFIAAKLEEIYPPKLSEFAYVTDSACTEADIVRQEMIILKALKWDLSPMTTNAWLGVYLQVANMDHITDPELGF-------------------------------VFPQFSTHAFVQISRLCDLALMDVGSFKFYRNVIAASALY 296
BLAST of NO19G00890 vs. NCBI_GenBank
Match: XP_012938110.1 (PREDICTED: G1/S-specific cyclin-E1-like isoform X5 [Aplysia californica]) HSP 1 Score: 110.5 bits (275), Expect = 2.200e-20 Identity = 74/203 (36.45%), Postives = 105/203 (51.72%), Query Frame = 0 Query: 164 ELRPDMRAQLLDWLMEVSANFFVRRRTFQAAVNYCDRFLSTVAVVFPKEKLQLLAITSLFVSSKMEEVYPAKAQELAEATAGAFTACDIVTFEIELMTSLAWNLTPPTSDDWAEWYLLAFLERGIPVAASAFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFQRLPTGVALRLQLLLDLALLDVTSLHFYPSMLAAAGLY 367 EL+P MR+ LLDWL EV + + + TF AV+Y DR+LS V V PK +LQLL I+SLF+++K+EE+YP K E A T A T DIV E+ ++ +L W+L+P T++ W YL I F F + T +++ L DLAL+DV S FY +++AA+ LY Sbjct: 121 ELQPRMRSILLDWLSEVCEVYRLHKETFTLAVDYLDRYLSVVDNV-PKTQLQLLGISSLFIAAKLEEIYPPKLSEFAYVTDSACTEADIVRQEMIILKALKWDLSPMTTNAWLGVYLQVANMDHITDPELGF-------------------------------VFPQFSTHAFVQISRLCDLALMDVGSFKFYRNVIAASALY 291
BLAST of NO19G00890 vs. NCBI_GenBank
Match: XP_011258683.1 (PREDICTED: G1/S-specific cyclin-E1 [Camponotus floridanus] >EFN66729.1 G1/S-specific cyclin-E [Camponotus floridanus]) HSP 1 Score: 110.2 bits (274), Expect = 2.900e-20 Identity = 103/336 (30.65%), Postives = 153/336 (45.54%), Query Frame = 0 Query: 155 DPTYEHRQIELRPDMRAQLLDWLMEVSANFFVRRRTFQAAVNYCDRFLSTVAVVFPKEKLQLLAITSLFVSSKMEEVYPAKAQELAEATAGAFTACDIVTFEIELMTSLAWNLTPPTSDDWAEWYLLAFLERGIPVAASAFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFQRLPTGVALRLQLLLDLALLDVTSLHFYPSMLAAAGLYLLLPHSFHPALAFATGYQPGDRALKHCKAYLTFLSTGLFDALPPLHDQQHQHQSFWTTVVSPRAQAAQVLVP---MWDRHSLQNH--PANLLPHLLGRITA--ISGHGDDTNLCKNSDCNIKSG 484 DP R L+P MRA LLDWL+EV + + R T+ A++Y DR+LS + PK +LQL+ IT LF++SK+EE+YP K E A T GA T +I+ E+ ++ L WNL+P T+ W Y+ +E G + F + L A + LLDLA LD L F S +AAA +Y H+ A ++ L C +LT +T + + D Q +S T+V S + VP + + H +Q H N+L R+T ++G+ +D SD N++SG Sbjct: 139 DPEMFQRHPTLQPRMRAILLDWLIEVCEVYKLHRETYYLAMDYIDRYLS-IHRDLPKNQLQLIGITCLFIASKVEEIYPPKIAEFAYVTDGACTEEEILGKELVILKGLGWNLSPITAPGWLNIYMQ--IESGDSSRPNTF----------------------------IYPQYGGLQYSQAAQ---LLDLATLDEGCLKFPYSHIAAAAIY----HTQGRECALRVSRLSWEQ-LAPCVKWLTAFATTVAE-----EDSQSLLKSTITSVESHSGSGLKATVPNIVVDESHRIQTHVVDLNMLEKAQQRLTGEILNGYAND------SDTNVESG 424
BLAST of NO19G00890 vs. NCBI_GenBank
Match: EPZ34375.1 (Cyclin domain-containing protein [Rozella allomycis CSF55]) HSP 1 Score: 110.2 bits (274), Expect = 2.900e-20 Identity = 88/288 (30.56%), Postives = 128/288 (44.44%), Query Frame = 0 Query: 136 HYGRRHFLKLREAEVQNAPDPTYEHRQIELRPDMRAQLLDWLMEVSANFFVRRRTFQAAVNYCDRFLSTVAVVFPKEKLQLLAITSLFVSSKMEEVYPAKAQELAEATAGAFTACDIVTFEIELMTSLAWNLTPPTSDDW--------AEWYLLAFLERGIPVAASAFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFQRLPTGVALRLQLLLDLALLDVTSLHFYPSMLAAAGLYLLLPHSFHPALAFATGYQPGDRALKHCKAY----LTFLS--TGLFDALP 410 HYG ++K E Q P+ Y R +L MR ++ WLMEV+ F + R T AVN+ DR+LS V P+ KLQLL IT+LFV+SK+EE++P K + AFT +IV E++LM +L W+L PT + W + W+ F ++ S F T L LLD+A+ D+ S PS++AA+ YL ++F G P + +K C Y + F + LFD +P Sbjct: 205 HYG---YVKGNNREKQMMPNMLYFQRHPDLTTRMRTTMIGWLMEVAKEFILHRETVYLAVNFIDRYLSLTTNV-PRNKLQLLGITALFVASKLEEMFPPKLKYYVLVCDDAFTRHEIVDMELKLMQTLKWDLCNPTCNLWLNLYLQNASRWFPKHFAPNNQSMSLSIFQNFRKRITPTRKGPGYL------------------YKTSHYLAAISLLDIAIHDLESTIHCPSLMAASAFYLKCCQFLPSNVSFIAGKDPSE-IIKACTGYSIDQIQFCNEWLSLFDHIP 469 The following BLAST results are available for this feature:
BLAST of NO19G00890 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO19G00890 ID=NO19G00890|Name=NO19G00890|organism=Nannochloropsis oceanica|type=gene|length=2281bpback to top protein sequence of NO19G00890.1 >NO19G00890.1-protein ID=NO19G00890.1-protein|Name=NO19G00890.1|organism=Nannochloropsis oceanica|type=polypeptide|length=737bpback to top Synonyms
Publications
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