NO19G00860, NO19G00860 (gene) Nannochloropsis oceanica

Overview
NameNO19G00860
Unique NameNO19G00860
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1453
Alignment locationchr19:293009..294461 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr19genomechr19:293009..294461 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO19G00860 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL012nonsL012Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR034ncniR034Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR039ngnoR039Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO19G00860.1NO19G00860.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|598899gene_7477Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO19G00860.1NO19G00860.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO19G00860 ID=NO19G00860|Name=NO19G00860|organism=Nannochloropsis oceanica|type=gene|length=1453bp
ATGGACTCCTCATCCTCAAGCATCTCGAGCATGTCGACGGTCTCGCATGG
TGGTGCGGCCGCGGAGGCCCAGCGGTGGGAGGAGCCGGAGCACATCAAGg
tattcaatgagtacaagctctacgccacgtgcggcatcccgcgcaagtag
cacgcggtatggaagaagcggtgctacttctgcagccaccacaaggacca
caagaaggacgtctactgcatctactgggctgcgtgtcgctcgacctgtg
gacggacataacgcagatggagtgggcgtgctcctccacaccaccatgaa
gACGAGTGACGGGTACGAGCAGAGGGAGATCTGCCTTGCCTGCACGAAGG
TGGACAAGAAGCACATCACGGCCGAGGTGGTGCAGCAGTACCTGGAGACG
ACCCTCAAGAACTTTGGCCTCCCCGTCAAGTCCATCTTCTGCGCCTTCCA
CGACGGCGACGCGAAGGTAATCATATGCGTCCGTGATGCTGACCTGCGCT
CCTCGCTCTGTTTCATTCGCAGCCTGCAGCGTACCATCGCCGTATCTTTC
AAGGGAGCGAATGCAGCCCTGGCTGTACTCAAGCGGACGAAGAAGGCCGT
CACGGGCGCCCGCCAGAGCAACGTGCAGGCGGCGTACCTGCGGGACGCCC
AGGTGTCCATCGGCGCCCCGCAGCGTGCCCTCATACAGGATAACCAGACG
CGgtggggttcaacgcacgacatggcggagcgcgcaacggagcaggaggg
ggccttccccgcggcgtacgggctagacgacgaccgtaaccgcgctttct
ccaagaaggtcttcgacccggagaagagactgtagccgggggacttctcc
ctcctgggcgaaatcgtgactgtctacagCCCCTTTCGCCAATTGACCAC
GGAGCTGCAGTCGGCAGGGATCACCACCTCTCTCGTCGTGCCCGCCTATT
TGCAGCTGGTGGACGGCCTCCAGGCGTACAGCGAGATCGTGGTGGAGATG
CCCCTCGCCGGCACCAGCTACCCCGCCACGTCTGTATGTAAGCCGGTGAG
TGAGCTGGATGCCTCGGAGCAGAGGATCGTAGCGCAGGCGCGCGTGGACT
TGATGGAGGAGGAGGAGGAGGAGGAGGAGGGCAAGGATGGGGGTGAAAAG
GAAGATGACGAGGATGTGGAGGAACAGTGGGCAGATATGGAGGAAGAGGT
AGCGGGAGCGGGGGAGGACAGTGAGATTGTGGAGCGGGACGAGCTGGGTT
TGGATGCCTTGATGGGATTCGATTTTATGGAGCCTAGCGATGACTTCTGG
GACGAGCTCGGGGAGGTGGAGGAGTGGTGGTTGGACGATGAGTGATTTCA
ATGGTATGTGGAGTATGTGTGCAGTGGAGGATGATCGTACGTAGGCTTTT
TTACTTTCCCCCCCCTTTCCTGCGAAGAACAAATAACCAAAGTAAGGCCC
CAC
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protein sequence of NO19G00860.1

>NO19G00860.1-protein ID=NO19G00860.1-protein|Name=NO19G00860.1|organism=Nannochloropsis oceanica|type=polypeptide|length=322bp
MDSSSSSISSMSTVSHGGAAAEAQRWEEPEHIKTSDGYEQREICLACTKV
DKKHITAEVVQQYLETTLKNFGLPVKSIFCAFHDGDAKVIICVRDADLRS
SLCFIRSLQRTIAVSFKGANAALAVLKRTKKAVTGARQSNVQAAYLRDAQ
VSIGAPQRALIQDNQTRPFRQLTTELQSAGITTSLVVPAYLQLVDGLQAY
SEIVVEMPLAGTSYPATSVCKPVSELDASEQRIVAQARVDLMEEEEEEEE
GKDGGEKEDDEDVEEQWADMEEEVAGAGEDSEIVERDELGLDALMGFDFM
EPSDDFWDELGEVEEWWLDDE*
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Synonyms
Publications