NO19G00850, NO19G00850 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO19G00850 vs. NCBI_GenBank
Match: EWM23587.1 (hypothetical protein Naga_100139g15 [Nannochloropsis gaditana]) HSP 1 Score: 397.5 bits (1020), Expect = 5.200e-107 Identity = 238/406 (58.62%), Postives = 289/406 (71.18%), Query Frame = 0
Query: 24 KPIPRFTVPHRPYHNHRPVSFSSSSLSQVPPPKPSASVYSSRPATS-LLSLQAWPQTRDPKPAPADYPLAAARISITVIACLLTSYAHSSTDAICSSPVLASAAVTLAGSLISPGLGQAAMCGSFAGMSSSLLLPTFSWTLLTGLVTSVLFEAFIHYRNAALGLGGRLGTIAFVSVNFVSALRGIWVLPALPSSLPPLXTLSTFAASIAAFPDVSVATLASLKTFVASSPYLPLTMGYGVVGALATIALREASDDSAAADPVRAAAVVGLLSALMVGVGGHTSLGALAAYGGAFVGMSLPSRLMYGSQPPLPGSSPSDAAPLTRPTT-------------PRNVLTNFAIAGLLGGLVHGLTLHWGMWTTPVAAWGGKAGFCAFVGVLLHRGMLRGLDGLEKLGRK 416
KP+ RP H H P S + PP+P +S S+ P++S LL AWPQTRDP P P DYPLAAAR+ ITV+ACLLTSY+H+S A+C+SPVLASAAVTLA SLI+PGLGQAAMCGSFAGMSS LLLP+F+ TL TG+ TS+LFEAFIHYRNAALGLGGRLG AF++VN ++A + +V+PA + S F+ S P +L +L F+ +SPYLPLT+ YG +G++ATIALREASDD+AAADPVRAAAVVGL+SAL VGV GHTSLG+LAAYGGAFVGMSLPSRL+YG++P LP SP ++ P +L +F++AG LGG VHGLTLH G WT PVA WGGKAG C+FVGVL+ RG+LR GL+ K
Sbjct: 56 KPLSSRPTLARPSH-HMP---SPGICRNLHPPRPFSS--STAPSSSLLLPRHAWPQTRDPTPLPPDYPLAAARVGITVLACLLTSYSHTSHQAMCASPVLASAAVTLAASLIAPGLGQAAMCGSFAGMSSPLLLPSFAVTLATGVCTSILFEAFIHYRNAALGLGGRLGATAFLAVNLIAASQRHFVVPA---------SSSPFSFS---SPTRFSLSLPALLHFIKTSPYLPLTIIYGALGSVATIALREASDDNAAADPVRAAAVVGLISALTVGVYGHTSLGSLAAYGGAFVGMSLPSRLLYGAEPVLPPLSPDSSSDSALPAAGVPXXXXXXXXXXXGKLLASFSLAGALGGAVHGLTLHLGWWTLPVAGWGGKAGMCSFVGVLIFRGLLRSWSGLKNAWTK 443
BLAST of NO19G00850 vs. NCBI_GenBank
Match: XP_002290069.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED91821.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 213.4 bits (542), Expect = 1.400e-51 Identity = 138/334 (41.32%), Postives = 187/334 (55.99%), Query Frame = 0
Query: 69 SLLSLQAWPQTRDPKPAPADYPLAAARISITVIACLLTSYAHSSTDAICSSPVLASAAVT-LAGSLISPGLGQAAMCGSFAGMSSSLLLPTFSWTLLTGLVTSVLFEAFIHYRNAALGLGGRLGTIAFVSVNFVSALRGIWVLPALPSSLPPLXTLSTFAASIAAFPDVSVATLASLKTFVASSPYLPLTMGYGVVGALATIALREASDDSAAADPVRAAAVVGLLSALMVGVGGHTSLGALAAYGGAFVGMSLPSRLMYGSQPPLPGSSPSDAAPLTRPTTPRNVLTNFAIAGLLGGLVHGLTLHWGMWTTPVAAWGGKAGFCAFVGVLLHRG 402
+LL WP RDP D+PL RI+IT+++ L T Y H SPVLAS+A+T L + + LGQAA CGSFAGMS L P F +L G++ S+ +E IH +N LG+GGRLG AF++ + ++ RG+ S++ + + + V+ +A + +GA+ATI LRE+SDDS AADPVRA++V+GLL AL + LA YGG+FVGM+LPSRLMYG+ P A +P TP +L +FA AG L G++HG+T+HWG W WGGKAG CAF G L+RG
Sbjct: 135 TLLHRIKWPVQRDPPEVSPDFPLLLTRITITILSVLSTWYLHLFNG---YSPVLASSAITLLVSTCLDRRLGQAAFCGSFAGMSGGHLAPNFGTAVLLGVLASINYEVLIHMKNFCLGIGGRLGATAFLATSILAKYRGV-------SAVGRKMRKGLWKSGSGGLSSIMVSMMA-----------------FHAIGAVATIFLRESSDDSGAADPVRASSVIGLLGALFL----KDPTSILALYGGSFVGMALPSRLMYGNAP--------GKAKQAQPQTPIGLLLSFAGAGALAGMIHGMTIHWGYWN---GGWGGKAGLCAFAGCWLYRG 426
BLAST of NO19G00850 vs. NCBI_GenBank
Match: EJK73398.1 (hypothetical protein THAOC_04981 [Thalassiosira oceanica]) HSP 1 Score: 199.9 bits (507), Expect = 1.600e-47 Identity = 140/327 (42.81%), Postives = 184/327 (56.27%), Query Frame = 0
Query: 76 WPQTRDPKPAPADYPLAAARISITVIACLLTSYAHSSTDAICSSPVLASAAVT-LAGSLISPGLGQAAMCGSFAGMSSSLLLPTFSWTLLTGLVTSVLFEAFIHYRNAALGLGGRLGTIAFVSVNFVSALRGIWVLPALPSSLPPLXTLSTFAASIAAFPDVSVATLASLKTFVASSPYLPLTMGYGVVGALATIALREASDDSAAADPVRAAAVVGLLSALMVGVGGHTSLGALAAYGGAFVGMSLPSRLMYGSQPPLPGSSPSDAAPLTRPTTPRNVLTNFAIAGLLGGLVHGLTLHWGMWTTPVAAWGGKAGFCAFVGVLLHRG 402
WP RDP +++PL RI +T + + T Y H SPVLAS+AVT L + + LGQAA CGSFAGMS LLP F L G ++S +E I+ N LG+GGRLG AF++ + RG+ I V + +S + VA S L + ++GA+ATI LRE+SDDSAAADPVRA++VVG+L +L + + ALA YGG+FVGMSLPSRLMY G++P +A P +P + N+L +FA AG + GLVH LT+H G WT WGGKAG CAF G ++RG
Sbjct: 350 WPLVRDPPGVASEFPLLVTRILVTCFSSVATWYLHLQNG---YSPVLASSAVTLLVSTCLDRRLGQAAFCGSFAGMSGGHLLPNFGSAALLGALSSASYELLININNVCLGIGGRLGATAFLATGIFAKYRGV--------------------RFIGRKLRRGVWSSSSGVSSVAISMIL-----FHIMGAVATIMLRESSDDSAAADPVRASSVVGVLGSLFI----NDPTSALALYGGSFVGMSLPSRLMY-------GNAPGNARP-GQPQSAANLLASFAGAGAIAGLVHALTIHSGYWT---GGWGGKAGLCAFAGCWVYRG 633
BLAST of NO19G00850 vs. NCBI_GenBank
Match: XP_002290068.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED91820.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 198.0 bits (502), Expect = 6.000e-47 Identity = 137/383 (35.77%), Postives = 199/383 (51.96%), Query Frame = 0
Query: 30 TVPHRPYHNHRPVSFSSSSLSQVPPPKPSASVYSSRP----------ATSLLSLQAWPQTRDPKPAPADYPLAAARISITVIACLLTSYAHSSTDAICSSPVLASAAVT-LAGSLISPGLGQAAMCGSFAGMSSSLLLPTFSWTLLTGLVTSVLFEAFIHYRNAALGLGGRLGTIAFVSVNFVSALRGIWVLPALPSSLPPLXTLSTFAASIAAFPDVSVATLASLKTFVASSPYLPLTMGYGVVGALATIALREASDDSAAADPVRAAAVVGLLSALMVGVGGHTSLGALAAYGGAFVGMSLPSRLMYGSQPPLPGSSPSDAAPLTRPTTPRNVLTNFAIAGLLGGLVHGLTLHWGMWTTPVAAWGGKAGFCAFVGVLLHRG 402
T + P R + S + +P P PS + + SRP A++ L WP DP ++PL R ++T+++ L T Y H SPVLAS+A+T L + + LGQAA+CG+ AGMS L P F +L G++ S+ +E IH +N LG+GGRLG AF++ + V+ R + S+ + + V + M + +GA+ATI LRE+SDD AADPV+A++V+GL+ A+ + +A YGG+FVGM+LPSRLM+GS P A +++P TP + T+FA+AG L G +HG+T+HWG W WGGK G CAF G L+RG
Sbjct: 312 TAVYSPISPQRDILGSPDFVDPIPSP-PSITQHYSRPKVRSQIDSNSASTYLRGVKWPVHSDPLGVSPEFPLLLTRSTVTILSALATWYLHLFNGC---SPVLASSAITLLVSTCVERRLGQAALCGTLAGMSGGHLAPNFGTAVLLGVLASINYEVLIHMKNFCLGIGGRLGATAFLATSVVAKYRRV-------GSVGRKLRRGIWKSGAGGLSSVMIT-----------------MMVFHAIGAVATICLRESSDDVGAADPVQASSVIGLMGAICLS----NPTAIMALYGGSFVGMALPSRLMHGSAP--------GKARISQPHTPVGMFTSFAVAGALAGAIHGMTIHWGYWN---GGWGGKIGLCAFAGCWLYRG 651
BLAST of NO19G00850 vs. NCBI_GenBank
Match: EJK73397.1 (hypothetical protein THAOC_04980 [Thalassiosira oceanica]) HSP 1 Score: 182.6 bits (462), Expect = 2.600e-42 Identity = 133/328 (40.55%), Postives = 183/328 (55.79%), Query Frame = 0
Query: 76 WPQTRDPKPAPADYPLAAARISITVIACLLTSYAHSSTDAICSSPVLASAAVT-LAGSLISPGLGQAAMCGSFAGMSSSLLLPTFSWTLLTGLVTSVLFEAFIHYRNAALGLGGRLGTIAFVSVNFVSALRGIWVLPALPSSLPPLXTLSTFAASIAAFPDVSVATLASLKTFVASSPYLPLTMGYGVVGALATIALREASDDSAAADPVRAAAVVGLLSALMVGVGGHTSLGALAAYGGAFVGMSLPSRLMYGSQPPLPGSSPSDAAPLTRPTTPRNVLTNFAIAGLLGGLVHGLTLHWGMWTTPVAAWGGKAGFCAFVGVLLHRGM 403
WP RDP +++PL RI +T ++ + T Y S VLAS+A+T L + + LGQAA CGSFAGMS + P S LL ++ S +E IH N+ LG+GGRLG AF++ + V+ +G+ ++ + S A ++S VA S L + ++GA+ATI LRE+SDDSAAADPVRA++VVGL+ AL + LA YGG+FVGMSLPSRLMY G++P +A P +P ++L +FA AG GL+H LT+H G WT WGGKAG CAF G ++R +
Sbjct: 155 WPLVRDPPGVASEFPLLMTRILVTCLSSVGTWYLSLYNG---YSAVLASSALTLLVSTCLDRRLGQAAFCGSFAGMSGGHIAPNLSVALLLSVLASASYEVLIHINNSCLGIGGRLGATAFLATSIVAKYQGVGIV----------------GKKLRRGVWKSGAGVSS----VAISMIL-----FHILGAVATIFLRESSDDSAAADPVRASSVVGLVGALFL----KDPTAILALYGGSFVGMSLPSRLMY-------GNAPGNARP-GQPQGAASLLASFAGAGAFAGLIHALTIHSGYWT---GGWGGKAGLCAFAGCWVYRAI 439
BLAST of NO19G00850 vs. NCBI_GenBank
Match: OEU23671.1 (hypothetical protein FRACYDRAFT_177647 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 157.1 bits (396), Expect = 1.200e-34 Identity = 124/334 (37.13%), Postives = 177/334 (52.99%), Query Frame = 0
Query: 79 TRDPKPAPADYPLAAARISITVIAC--------LLTSYAHSSTDAICSSPVLASAAVTLAGSLI-SPGLGQAAMCGSFAGMSSSLLLPTFSWTLLTGLVTSVLFEAFIHYRNAALGLGG-RLGTIAFVSVNFVSALRGIWVLPALPSSLPPLXTLSTFAASIAAFPDVSVATLASLKTFVASSPYLPLTMGYGVVGALATIALREASDDSA-AADPVRAAAVVGLLSALMVGVGGHTSLGALAAYGGAFVGMSLPSRLMYGSQPPLPGSSPSDAAPLTRPTTPRNVLTNFAIAGLLGGLVHGLTLHWGMWTT-PVAAWGGKAGFCAFVGVLLHR 401
T DPK +DYPL R+ I + +C LLT+Y H +T+ V+ S+AVTL S++ LGQAA+CGSFAGM S+ ++PT L+ G +TS+L+E + LG+GG R G AF+ LPS L + S++ S L L + LP+ Y +G++ATI LRE SDD+A A DPVRA+AV+GL AL++ + + LA YGG+ VGMSLPS+LM ++ +++ F IAG GL+HG T+ W +W+ A+WGGKAG CAF+G +++R
Sbjct: 5 TNDPKGMSSDYPLGITRMLIIIGSCYLTWFVPQLLTNYPHHATN------VMVSSAVTLVCSMMFDKRLGQAALCGSFAGMCSTSIIPTTKLALILGSITSILYEIMPFF----LGVGGERSGITAFI---------------VLPSLLNGIGISSSYRGS---------KRLLKLSALNIHTTLLPMAFWY-AIGSIATIVLREISDDTAVAVDPVRASAVIGLAGALLL---KYDKIAVLAVYGGSIVGMSLPSKLMMNNR---SSXXXXXXXXXXXXXXXLSLVLAFGIAGAFSGLIHGATIDWKLWSDHGGASWGGKAGTCAFLGCIIYR 297 The following BLAST results are available for this feature:
BLAST of NO19G00850 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 6
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO19G00850 ID=NO19G00850|Name=NO19G00850|organism=Nannochloropsis oceanica|type=gene|length=1781bpback to top protein sequence of NO19G00850.1 >NO19G00850.1-protein ID=NO19G00850.1-protein|Name=NO19G00850.1|organism=Nannochloropsis oceanica|type=polypeptide|length=426bpback to top Synonyms
Publications
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