NO19G00680, NO19G00680 (gene) Nannochloropsis oceanica

Overview
NameNO19G00680
Unique NameNO19G00680
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1675
Alignment locationchr19:246047..247721 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr19genomechr19:246047..247721 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO19G00680 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR055ncniR055Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR034ncniR034Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR039ngnoR039Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO19G00680.1NO19G00680.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|642613gene_9720Nannochloropsis oceanica (N. oceanica CCMP1779)gene
jgi.p|Nanoce1779_2|653725gene_7459Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO19G00680.1NO19G00680.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO19G00680 ID=NO19G00680|Name=NO19G00680|organism=Nannochloropsis oceanica|type=gene|length=1675bp
CTACTCCTTACCGCCAAACTCAACCTAAATCAGGCCCACCATGGCTTACC
AGCTTCGCTGCCTGGGTCTCTCCCTCCTCTTTGCCTCGCTCGTCTCGGGG
GCCTGGAACCCATTCGCTGACCTTTCTCAAGGCATCTCTGCCCACGTCGA
CCGCAATGTCGGAGAGACGGACGGTACCCTTACCAGCAGCACGGGAGGGC
TGGTCGTTCCGCCTGTGCGTGGCGGGGGCTTCCTGTGGTGGACATCCACG
GAAGAGAAAGGTGAACTTGCAAAGGAAGACGCCCAAAAATCTTGGTTCTG
GGGAAAGGAGTATGCGAAGGATAAGGCGTCTGACACCAAAGACGCAGTGA
CTACCAAGGCTGAGGCAGCGAAGAAAAAGTCCGCTAAGGCGTCAGAGCAG
GGTAAAGAGTCGTTGCATAATATGAAGGACAAGCTGAGCGACAAGTACGA
CACAGTGAAAGCGCAAGCCAAGTGTGTGGCAAGCAAGACGACGGAGGGCA
TGAAGGAGGGAGTGGACAGCACCAAGTCCACCTTGGCGACGGGCAGGCAC
AAAATCAAGGCGGTGGGAAACACTGTCGAGGTCTTGGGGGATATGAAGAC
GGGCTACGACAAATACCTGCATGGCAAGGCCCAAGCAAATCAACTGGTGC
ACAGTGCCGAGGAGGGGGTGGAGGAAGGGATGGAAAAAACCAAAGGGCTG
TTGAGTTGGATCATAGAGGTGCTTGGGTGGCCTTTTCGTTCACGTAGGGT
GGTAACGACGACGACGATCCGCGACCGAGGCGTGATGAGCAGGGAGGAGG
GTGGACCCTTTGTTCTGGAGGAAGAAAATTTGGTGACGGCTCCCAAGAGC
GTGGATGATGCATTGGAAGAGTTTGAGACGTGCAAGgtgcatagggaggg
agggaaggagggagggaagaagggagggagggagagatcttttgactcaa
aaatccctctcttaatcaataaaatgaataagattgattgccacacgcca
cttactctctccttccattaatcttccttcttccccacccacacagCAAG
TTGATTCAATGACCGAGGAGGAGGCCCAGAAGACCCGCAATCTGTTTCAA
GCAGCTCGTGACATGATTAAAGGCCGGCCGCCCTTGCGTTCGGAGCAGAC
GGTGCCTGCCGAGTCTTTTAAGGAGCGCTACGCCAAGGAGAAGAGGGAGA
CGGAGGAGAGGCAGCGTCATTGGTAGGGGGAAGAGAAGGAGGGAGGGAGG
GAGGGAGCGAGGGAAGCGTGTATTGGGTAGTCTTGTTCTGAGTGCAATGA
GGAGGAGGGTAAAGATAGAATGAGAGAGTAACGACGAGGGGAGAAGGAGA
AGAGAGAACGAGCGGGGGCGGAAAGCGCAGGAAGAGAAAGGGGGAAACAA
GAGAAGGGAGGAATGATGGGGTAGGGGAAGAGACCGAGTAACAAGACTGC
AAACATTAGCTGGATATAGAAAAACAGCCGAAGAAGAAGAAGAGAAGCAA
TTATTACGACAGTCATAGCGCGTTGAATAAAGGAAAAAGAGAACCCATGA
GAGAGAATGGAGGAAAAGAAATTGTATTGACATAAGGCTCTTTCCTTTTC
CAAAAAGAAAGGAGAGAAGAGAGGCAGGGATCCTTCATTTTGTTGTTCTT
GCTAAGATCTTTGAGCGCCCCCCCC
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protein sequence of NO19G00680.1

>NO19G00680.1-protein ID=NO19G00680.1-protein|Name=NO19G00680.1|organism=Nannochloropsis oceanica|type=polypeptide|length=342bp
MAYQLRCLGLSLLFASLVSGAWNPFADLSQGISAHVDRNVGETDGTLTSS
TGGLVVPPVRGGGFLWWTSTEEKGELAKEDAQKSWFWGKEYAKDKASDTK
DAVTTKAEAAKKKSAKASEQGKESLHNMKDKLSDKYDTVKAQAKCVASKT
TEGMKEGVDSTKSTLATGRHKIKAVGNTVEVLGDMKTGYDKYLHGKAQAN
QLVHSAEEGVEEGMEKTKGLLSWIIEVLGWPFRSRRVVTTTTIRDRGVMS
REEGGPFVLEEENLVTAPKSVDDALEEFETCKQVDSMTEEEAQKTRNLFQ
AARDMIKGRPPLRSEQTVPAESFKERYAKEKRETEERQRHW*
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Synonyms
Publications