NO19G00600, NO19G00600 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO19G00600 vs. NCBI_GenBank
Match: EWM23566.1 (SNARE associated Golgi protein [Nannochloropsis gaditana]) HSP 1 Score: 258.5 bits (659), Expect = 3.500e-65 Identity = 150/258 (58.14%), Postives = 177/258 (68.60%), Query Frame = 0 Query: 88 YSNVGHHHVAHTLSSFLAWVGRHPAEGAMAFAGVYALCVIFFVPGAALTLGGGFLFGHALGVGIGTLAASIAVFVGASTGALISFGLGRCLLRDVAQSVLGRYPLLRALDASLRSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVMLLLRLSPLVPFSALNYLMSVTSITSEDYAVGLVGMLPAVVAYSFLGTTAGAISREAAEGGEEEGGGERKLERVVRIVMYVLGGVSLVVAVGLMSRYARKEL 346 YS GH HVA LS+FL WVGRHP GAMAFA VYAL V+FFVPGAALTLGGGFLFG ALGVG GT+ AS+AVFVGAS GA+ +F LGR LL + AQS L RY +LRALDASL K++LLLRLSPLVPF+ALNY+MSVTS++ + Y +GLVGM+PAVVAYSFLGTTAG ++REA GGE +ER V+I MYV+G V+LV AVG++SR+AR+EL Sbjct: 69 YSPAGHRHVARVLSTFLEWVGRHPLRGAMAFAAVYALSVVFFVPGAALTLGGGFLFGQALGVGPGTVFASLAVFVGASAGAVAAFSLGRWLLHETAQSTLNRYTILRALDASLHG-----------------------------------HRGLKIVLLLRLSPLVPFTALNYMMSVTSVSLKTYTLGLVGMVPAVVAYSFLGTTAGGLTREA--------GGESSVERGVKIAMYVVGAVALVAAVGVLSRFAREEL 283
BLAST of NO19G00600 vs. NCBI_GenBank
Match: CBJ28819.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 141.0 bits (354), Expect = 8.000e-30 Identity = 82/209 (39.23%), Postives = 121/209 (57.89%), Query Frame = 0 Query: 88 YSNVGHHHVAHTLSSFLAWVGRHPAEGAMAFAGVYALCVIFFVPGAALTLGGGFLFGHALGVGIGTLAASIAVFVGASTGALISFGLGRCLLRDVAQSVLGRYPLLRALDASLRSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVMLLLRLSPLVPFSALNYLMSVTSITSEDYAVGLVGMLPAVVAYSFLGTTAGAI 297 Y+ G VA TL+SFL WV +P GA+AFA VY + F+PG+ LTLG G +FG ALG G+G L S+AV GA+ G++++F LGR +L++ AQ + ++ +L+A++ +++S K+++LLRLSP+VPFSA NY+M VT + DYA+G VG +P VA+ F+GTTA + Sbjct: 62 YTVPGLGFVADTLTSFLEWVEDNPGLGALAFALVYVFTTVCFIPGSLLTLGAGLVFGRALGTGLGILVGSLAVLAGATVGSILAFLLGRFVLQEQAQGLFNKFKVLKAVNRAIKS------------------------------------QGLKLVILLRLSPVVPFSAFNYVMGVTDVFFRDYAIGCVGFIPGTVAFVFIGTTASGL 234
BLAST of NO19G00600 vs. NCBI_GenBank
Match: EJK65235.1 (hypothetical protein THAOC_13931 [Thalassiosira oceanica]) HSP 1 Score: 132.5 bits (332), Expect = 2.900e-27 Identity = 89/247 (36.03%), Postives = 131/247 (53.04%), Query Frame = 0 Query: 99 TLSSFLAWVGRHPAEGAMAFAGVYALCVIFFVPGAALTLGGGFLFGHALGVGIGTLAASIAVFVGASTGALISFGLGRCLLRD-VAQSVLGRYPLLRALDASLRSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVMLLLRLSPLVPFSALNYLMSVTSITSEDYAVGLVGMLPAVVAYSFLGTTAGAISREAAEGGEEEGGGERKLERVVRIVMYVLGGVSLVVAVGLMSRYARKE 345 T+S+FL W+ + G AF GVY + + FVPG+ LTLGGGF+FG ALG+G G AS AVF+GAS GA+ SF LGR LLRD V + + +Y ++ AL ++L ++ +LLRLSP++PF+A+NY++ TS+ Y L+G+LP V Y F+G TAG+++ E G G V + ++G V + ++ L+ YA+KE Sbjct: 60 TVSAFLEWIESNVIAGVFAFMGVYFVATVLFVPGSVLTLGGGFVFGKALGLGRGVALASSAVFIGASLGAIASFLLGRYLLRDWVTERLFKKYKIMTALGSALEE------------------------------------KGFQIAILLRLSPIIPFNAINYILGATSMRLVHYIFSLLGILPGTVLYCFIGATAGSLT----ESGSAVSG-------PVAVASLIVGIVFGLASLFLVGYYAKKE 259
BLAST of NO19G00600 vs. NCBI_GenBank
Match: EJK67984.1 (hypothetical protein THAOC_10891 [Thalassiosira oceanica]) HSP 1 Score: 123.2 bits (308), Expect = 1.700e-24 Identity = 84/207 (40.58%), Postives = 107/207 (51.69%), Query Frame = 0 Query: 95 HVAHTLSSFLAWVGRHPAEGAMAFAGVYALCVIFFVPGAALTLGGGFLFGHALGVGIGTLAASIAVFVGASTGALISFGLGRCLLRDVAQSVLGRYPLLRALDASLRSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVMLLLRLSPLVPFSALNYLMSVTSITSEDYAVGLVGMLPAVVAYSFLG---TTAGAISR 299 HV FL WV H G +AF VYA+ +FFVPGA LTLGGG++FG A G+G G L AS+AVF GAS GA+ SF LGR LLRD A + RYP+++ALDA++ K+ +LLRLS VPF+ALNY+ T+I Y V L+GM + + LG G +SR Sbjct: 77 HVQAITRRFLDWVQNHVYVGILAFVLVYAIATVFFVPGAVLTLGGGYVFGSAFGLGKGVLVASLAVFAGASGGAIASFLLGRYLLRDYASGLADRYPIMKALDAAI------------------------------------GRNSFKIFVLLRLSVNVPFNALNYISGATAIGLGVYCVTLLGMCLVLCCTASLGPLPVVLGMVSR 247
BLAST of NO19G00600 vs. NCBI_GenBank
Match: OEU13175.1 (SNARE_assoc-domain-containing protein, partial [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 122.1 bits (305), Expect = 3.900e-24 Identity = 72/197 (36.55%), Postives = 108/197 (54.82%), Query Frame = 0 Query: 103 FLAWVGRHPAEGAMAFAGVYALCVIFFVPGAALTLGGGFLF-GHALGVGIGTLAASIAVFVGASTGALISFGLGRCLLRD-VAQSVLGRYPLLRALDASLRSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVMLLLRLSPLVPFSALNYLMSVTSITSEDYAVGLVGMLPAVVAYSFLGTTAGAIS 298 FL WV ++P G +AF VY +C IFF+PG+ LTLG GF+F + G L +IA F+GAS GA++SF LGR L R+ ++ ++ +YP+ A+D +L ++M+LLRLSP++PF+ LNY+ +T I DY + +GMLP + Y FLG++AG++S Sbjct: 8 FLNWVEQNPIYGVLAFVLVYVVCTIFFIPGSILTLGAGFVFTASTSSLWTGVLLGTIATFIGASIGAILSFLLGRYLFRESISTKLITKYPVFTAIDTALNE------------------------------------KGLRIMILLRLSPIIPFNVLNYVSGITGIKLFDYCIACIGMLPGTILYVFLGSSAGSLS 168
BLAST of NO19G00600 vs. NCBI_GenBank
Match: XP_002185108.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC43240.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 119.0 bits (297), Expect = 3.300e-23 Identity = 72/202 (35.64%), Postives = 104/202 (51.49%), Query Frame = 0 Query: 93 HHHVAHTLSSFLAWVGRHPAEGAMAFAGVYALCVIFFVPGAALTLGGGFLFGHALGVGIGTLAASIAVFVGASTGALISFGLGRCLLRDVAQSVLGRYPLLRALDASLRSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVMLLLRLSPLVPFSALNYLMSVTSITSEDYAVGLVGMLPAVVAYSFLGTTAG 295 + +V + SFL W+ + EG F VY I F+PG+ LTLG GF+F + G+G+G + AVF+GAS GA SF +GR LLRD A + +Y + ALD +L+ K+++LLRLSP+VPF+A+NY+ VT+++ DY + L +LP Y FLG +AG Sbjct: 44 NRYVRDGIDSFLDWIEENSVEGIFLFVLVYFAATILFIPGSILTLGAGFVFASSFGLGLGLVIGVFAVFLGASLGATASFFIGRYLLRDQATKLTKKYAVFEALDVALQEN------------------------------------GLKILVLLRLSPIVPFNAINYICGVTAVSIRDYILALFAILPGTTLYVFLGASAG 209
BLAST of NO19G00600 vs. NCBI_GenBank
Match: XP_002179936.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC48922.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 118.6 bits (296), Expect = 4.300e-23 Identity = 87/260 (33.46%), Postives = 129/260 (49.62%), Query Frame = 0 Query: 88 YSNVGHHHVAHTLSSFLAWVGRHPAEGAMAFAGVYALCVIFFVPGAALTLGGGFLFGHAL-GVGIGTLAASIAVFVGASTGALISFGLGRCLLRDVAQSVLGRYPLLRALDASLRSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVMLLLRLSPLVPFSALNYLMSVTSITSEDYAVGLVGMLPAVVAYSFLGTTAGAISREAAEGGE-EEGGGERKLERVVRIVMYVLGGVSLVVAVGLMSRYARKEL 346 + ++ + T +SF W+ HP G +A VY I FVPG+ LT+G GF F A G G +S+AVFVGAS G++ SF LGR L R+ + YP+ RA+D +L + K+M+LLRLSPL+P++AL+Y+ VTSI+ Y+V LVG+LP + + +G TA ++ AEG + E GG +R+ V G + + G+ S Y++ EL Sbjct: 55 FDSMKEKRIERTAASFFTWIESHPFLGVLAVILVYTAATICFVPGSVLTIGTGFAFRSAFDDFGKGLALSSLAVFVGASCGSVCSFLLGRYLFREWVVRLASSYPIFRAIDRALENN------------------------------------GLKIMVLLRLSPLIPYNALDYISGVTSISLFSYSVALVGLLPGTITFCAIGATASSL----AEGTDRSENGG-------LRVFALVFGLIFAFLGAGVASFYSKIEL 267
BLAST of NO19G00600 vs. NCBI_GenBank
Match: CBJ28293.1 (Hypothetical UPF0043 protein slr0305 [Ectocarpus siliculosus]) HSP 1 Score: 111.7 bits (278), Expect = 5.200e-21 Identity = 73/209 (34.93%), Postives = 110/209 (52.63%), Query Frame = 0 Query: 93 HHHVAHTLSSFLAWVGRHPAEGAMAFAGVYALCVIFFVPGAALTLGGGFLFGHALGVGIGTLAASIAVFVGASTGALISFGLGRCLLRDVAQSVLGRYPLLRALDASL-RSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVMLLLRLSPLVPFSALNYLMSVTSITSEDYAVGLVGMLPAVVAYSFLG-TTAGAISRE 300 H +V L + W+ +P G + FA ++ L + FVPG LT+G G FG ALG G G L S+AV +GA +I+F LGR +L + AQS RY +L A++ ++ R+G KVM+LLRLSPLVPFS N++ +T ++ DY +G VG++P +A+ ++G +TAG ++ E Sbjct: 86 HDNVRTWLETSFDWIEDNPKAGVVVFALLFCLSTLLFVPGLLLTIGAGVAFGRALGFGFGVLWGSVAVLLGAVVACVIAFYLGRYVLHEQAQSCAKRYRILSAVNTAIERNG-------------------------------------VKVMILLRLSPLVPFSGFNFIAGLTKVSLRDYLLGTVGIVPGTLAFVYIGASTAGTMNEE 257
BLAST of NO19G00600 vs. NCBI_GenBank
Match: CEM03564.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 109.8 bits (273), Expect = 2.000e-20 Identity = 84/253 (33.20%), Postives = 120/253 (47.43%), Query Frame = 0 Query: 96 VAHTLSSFLAWVGRHPAEGAMAFAGVYALCVIFFVPGAALTLGGGFLFGHALGVGIGTLAASIAVFVGASTGALISFGLGRCLLRDVAQSVLGRYPLLRALDASLRSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVMLLLRLSPLVPFSALNYLMSVTSITSEDYAVGLVGMLPAVVAYSFLGTT---AGAISREAAEGGEEEGGGERKLERVVRIVMYVLGGVSLVVAVGLMSRYARKEL 346 VA L F WV +PA G +A+ VY +C + F+PG+ LTLG GF F A G G G A AV VGA GA ++F GR L + Q + ++ ++RA+D + K+ +LLRLSP+VPFSA NY+M T DYA+G +G++P Y ++G AGA S G+ EG G + V +G V+ +AV +++ +ARK L Sbjct: 79 VAEGLDIFKEWVQDNPATGILAYMAVYMVCTVAFIPGSILTLGAGFTFVCAFGNGPGMAAGIGAVLVGAFVGAQLAFFCGRFLFKSWVQGLTDKFKVMRAIDKVFET------------------------------------QGLKLNILLRLSPVVPFSAFNYIMGGTRTRYRDYAIGTLGIIPGTALYVYIGAIPAFAGACS------GKAEGSGHWS-----QWVFLAVGLVATFIAVFIVTWFARKAL 284
BLAST of NO19G00600 vs. NCBI_GenBank
Match: OEU13059.1 (SNARE_assoc-domain-containing protein [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 107.5 bits (267), Expect = 9.800e-20 Identity = 81/244 (33.20%), Postives = 121/244 (49.59%), Query Frame = 0 Query: 103 FLAWVGRHPAEGAMAFAGVYALCVIFFVPGAALTLGGGFLFGHAL-GVGIGTLAASIAVFVGASTGALISFGLGRCLLRDVAQSVLGRYPLLRALDASLRSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVMLLLRLSPLVPFSALNYLMSVTSITSEDYAVGLVGMLPAVVAYSFLGTTAGAISREAAEGGEEEGGGERKLERVVRIVMYVLGGVSLVVAVGLMSRYARKEL 346 FL WV R+P +G A Y + I FVPG+ LTLG G+ G A+ G L A+ +VF+GAS G++ SF LGR L RD + YP+ +A++ +L K+M+LLRLSPL+PF+AL+Y+ VTSI+ DY V LV +LP + F+G +A ++S + G K+ +V +++ GG V + S Y+++EL Sbjct: 2 FLEWVHRNPYKGIFAITLCYIVATILFVPGSILTLGAGYAIGSAIENTFGGVLLATASVFIGASIGSICSFLLGRYLFRDCVLQLAFSYPIFQAIERALEEN------------------------------------GLKIMILLRLSPLIPFNALDYISGVTSISLRDYTVALVALLPGALLLCFVGASASSLS----DATTTSTGKTVKIFTIVSGILF--GG----CGVWMASYYSKQEL 199 The following BLAST results are available for this feature:
BLAST of NO19G00600 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO19G00600 ID=NO19G00600|Name=NO19G00600|organism=Nannochloropsis oceanica|type=gene|length=1176bpback to top protein sequence of NO19G00600.1 >NO19G00600.1-protein ID=NO19G00600.1-protein|Name=NO19G00600.1|organism=Nannochloropsis oceanica|type=polypeptide|length=392bpback to top Synonyms
Publications
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