NO19G00590, NO19G00590 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO19G00590 vs. NCBI_GenBank
Match: EWM23567.1 (Cobalamin (vitamin B12) biosynthesis CobW [Nannochloropsis gaditana]) HSP 1 Score: 378.6 bits (971), Expect = 3.300e-101 Identity = 348/579 (60.10%), Postives = 387/579 (66.84%), Query Frame = 0 Query: 1 MCRFCERAKVQLSG-------EPFTPSXXXXXXXXXXXXXXXXXXXXXXXXXXAGLSIAERLEIEACALLQNKRLPVTLLCGYLGSGKTTLLNHILRSAHGKRLAVIENEFGSVSIDDALLPS-FXXXXXXXXXXXXXXXXXXXXXEIVLMPNGCLCCRARQDLVTAFMDILEANTHQQKGLPTLSLDGLILELSGLADVGPVVQTFFSDPQVQAQLRLDAIICVVDAHALSRALVLQGGRXXXXXXXXXXXXXXXXXVASLELIAEQLALADRVLLNKMDLLEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHVHKRLGFTSIGIEVTDGPLEWAAFEQWLGTLLTKSTQPVVAAPGETASPSLAPSASLSID-------EVAAPIPTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLKGIVYVTKKTPYRRATIVQKRVVLQGIYGHLEMDEAEIPPSLPSSPSPPPCSKLVVIGRFGDAGALKKEMERGLLECLAPGWYSKR 565 MCRFCE+AK Q++G P + XXXXXXXXXXXXXXXXXXXXXXXXXXAGLS +ER EIE+CALL++KRLPVTLLCGYLGSGKTT LN++L+ +HGKRLAVIENEFG+VSIDDALLPS XXXXXXXXXXXXX ++VLMPNGCLCCRARQDLV AF+ +L NT QQKG+ TL LDG+ILELSGLADVGPVVQTFFS P+VQAQLRLDA+ICVVDA +LSR XXXXXXXXXXXXXXXXX SLELIAEQLALADRVLLNKMDLLE XXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXX H RLGFTSIG+ + DGPLEW AFE WL + ++A T S S P+ L + EV+ P R KG+++VTKKTPYRRAT+V+KRVVLQGIYGHLEM E E +S P SKLV IG F D A+K+ ME LLECLAPGWY+KR Sbjct: 1 MCRFCEQAKAQIAGIARPGSTPPASXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGLSFSERREIESCALLRSKRLPVTLLCGYLGSGKTTFLNYVLQGSHGKRLAVIENEFGAVSIDDALLPSPXXXXXXXXXXXXXXRARAPEEAQVVLMPNGCLCCRARQDLVEAFLHLLAVNTKQQKGVATLQLDGIILELSGLADVGPVVQTFFSHPEVQAQLRLDAVICVVDAFSLSRVXXXXXXXXXXXXXXXXXXXXXXXXXXSLELIAEQLALADRVLLNKMDLLEAAXXXXXXXXXXXXXXXXXXXXXXXXXEAVLLACVRGEVPLEEVLGLEAFSPSRTFQ---GEKESKGKKWMDGGAXXXXXXXXXXXXXXXXXXXXXAHTRLGFTSIGLTIDDGPLEWTAFESWL--------EQTLSATKSTGSGSRGPAGDLREEGQRGDGREVSKEPP--------------------QEGSALRQEQGEGQVIVRTKGVLWVTKKTPYRRATVVEKRVVLQGIYGHLEMREEE---GDMASGHFPLVSKLVFIGLFKDPVAMKRNMEGALLECLAPGWYAKR 545
BLAST of NO19G00590 vs. NCBI_GenBank
Match: GBG34681.1 (COBW domain-containing protein DDB_G0274527, partial [Aurantiochytrium sp. FCC1311]) HSP 1 Score: 166.4 bits (420), Expect = 2.600e-37 Identity = 109/273 (39.93%), Postives = 137/273 (50.18%), Query Frame = 0 Query: 1 MCRFCERAKVQLSGEPFTPSXXXXXXXXXXXXXXXXXXXXXXXXXXAGLSIAERLEIEACALLQNKRLPVTLLCGYLGSGKTTLLNHILRSAHGKRLAVIENEFGSVSIDDALLPSFXXXXXXXXXXXXXXXXXXXXXEIVLMPNGCLCCRARQDLVTAFMDILEANTHQQKGLPTLSLDGLILELSGLADVGPVVQTFFSDPQVQAQLRLDAIICVVDAHALSRALVLQGGRXXXXXXXXXXXXXXXXXVASLELIAEQLALADRVLLNKMD 274 MCRFCE A+ Q+ GE GLS ERL E CA LQ RLP +L G LG+GKTTLL +L+ + G ++AVIENE G SIDD LL S E+VLMPNGC+CCR R DLV F ++ LDG+ILELSGL+ + PVVQTFFSDP VQ L+LD++ICVVDA R L+ + R +L EQ++L+D V++NK+D Sbjct: 65 MCRFCEEAQAQVRGE------------------------------VDGLSNEERLAAEGCARLQANRLPCVVLTGLLGAGKTTLLTRLLKDS-GLKIAVIENEVGKESIDDKLLRS-----------ETDRIAMDNADEVVLMPNGCMCCRVRGDLVDTFKRLIGRAD---------ELDGIILELSGLSSLAPVVQTFFSDPFVQRSLQLDSVICVVDAVQADRLLLGEAPRENGQEETDDWSMLG-------DLAQEQISLSDMVIVNKLD 279
BLAST of NO19G00590 vs. NCBI_GenBank
Match: OWZ12539.1 (Cobalamin synthesis protein [Phytophthora megakarya]) HSP 1 Score: 147.9 bits (372), Expect = 9.500e-32 Identity = 94/215 (43.72%), Postives = 117/215 (54.42%), Query Frame = 0 Query: 63 LQNKRLPVTLLCGYLGSGKTTLLNHILRSAHGKRLAVIENEFGSVSIDDALLPSFXXXXXXXXXXXXXXXXXXXXXEIVLMPNGCLCCRARQDLVTAFMDILEANTHQQKGLPTLSLDGLILELSGLADVGPVVQTFFSDPQVQAQLRLDAIICVVDA-HALSRALVLQGGRXXXXXXXXXXXXXXXXXVASLEL-IAEQLALADRVLLNKMDLL 276 L +LPVT+L G+LGSGKTTLLNH+L HGK+ A+IENEFG V +DD L+ EI+ M NGC+CC R DLV IL+ N + + LDG+I+E +G+AD GPVVQTFF++P V A LD II VVDA H L L+ G A +E EQ+A ADRVLLNK DL+ Sbjct: 6 LSPSKLPVTILTGFLGSGKTTLLNHLLMENHGKKFAIIENEFGEVGVDDQLIRQ-VTNPNDIGGGDSRSRKFNMGEEILTMNNGCICCSVRGDLVRLIAQILKRNGDRNQ------LDGIIIETTGMADPGPVVQTFFAEPLVAATCELDGIITVVDAKHILQH---LRPG-------------------AGVEFECQEQIAFADRVLLNKTDLV 191
BLAST of NO19G00590 vs. NCBI_GenBank
Match: XP_002899892.1 (cobalamin synthesis protein, putative [Phytophthora infestans T30-4] >EEY60519.1 cobalamin synthesis protein, putative [Phytophthora infestans T30-4]) HSP 1 Score: 147.1 bits (370), Expect = 1.600e-31 Identity = 90/209 (43.06%), Postives = 112/209 (53.59%), Query Frame = 0 Query: 67 RLPVTLLCGYLGSGKTTLLNHILRSAHGKRLAVIENEFGSVSIDDALLPSFXXXXXXXXXXXXXXXXXXXXXEIVLMPNGCLCCRARQDLVTAFMDILEANTHQQKGLPTLSLDGLILELSGLADVGPVVQTFFSDPQVQAQLRLDAIICVVDAHALSRALVLQGGRXXXXXXXXXXXXXXXXXVASLELIAEQLALADRVLLNKMDLL 276 +LPVT+L G+LGSGKTTLLNH+L HGKR A+IENEFG V +DD L+ EI+ M NGC+CC R DLV IL+ N + + LDG+I+E +G+AD GPVVQTFF++P V A LD II VVDA + + L G EQ+A ADRVLLNK DL+ Sbjct: 10 KLPVTILTGFLGSGKTTLLNHLLTENHGKRFAIIENEFGEVGVDDQLICQ-VTTPDDIGGGDSRSRKFNMGEEILTMNNGCICCSVRGDLVRLIAQILKRNGDRSQ------LDGIIIETTGMADPGPVVQTFFAEPLVAATCELDGIITVVDAKHILQHLRPGNGVEYE--------------------CEEQIAFADRVLLNKTDLV 191
BLAST of NO19G00590 vs. NCBI_GenBank
Match: XP_009525763.1 (hypothetical protein PHYSODRAFT_248037 [Phytophthora sojae] >EGZ16705.1 hypothetical protein PHYSODRAFT_248037 [Phytophthora sojae]) HSP 1 Score: 146.7 bits (369), Expect = 2.100e-31 Identity = 89/213 (41.78%), Postives = 113/213 (53.05%), Query Frame = 0 Query: 63 LQNKRLPVTLLCGYLGSGKTTLLNHILRSAHGKRLAVIENEFGSVSIDDALLPSFXXXXXXXXXXXXXXXXXXXXXEIVLMPNGCLCCRARQDLVTAFMDILEANTHQQKGLPTLSLDGLILELSGLADVGPVVQTFFSDPQVQAQLRLDAIICVVDAHALSRALVLQGGRXXXXXXXXXXXXXXXXXVASLELIAEQLALADRVLLNKMDLL 276 L +LPVT+L G+LGSGKTTLLNH+L HGK+ A+IENEFG V +DD L+ E++ M NGC+CC R DLV IL+ N + + LDG+I+E +G+AD GPVVQTFF++P V A LD II VVDA + + L G EQ+A ADRVLLNK DL+ Sbjct: 6 LTPSKLPVTILMGFLGSGKTTLLNHLLTENHGKKFAIIENEFGEVGVDDQLIRQ-VASPEDIGGGDSRSRKFNMGEEVLTMNNGCICCSVRGDLVRLIAQILKRNGDRNQ------LDGIIIETTGMADPGPVVQTFFAEPLVAATCELDGIITVVDAKHILQHLRPGAGVEHE--------------------CQEQIAFADRVLLNKTDLV 191
BLAST of NO19G00590 vs. NCBI_GenBank
Match: ETI36799.1 (hypothetical protein F443_17141 [Phytophthora parasitica P1569] >ETL83677.1 hypothetical protein L917_16411 [Phytophthora parasitica] >ETO65519.1 hypothetical protein F444_17183 [Phytophthora parasitica P1976]) HSP 1 Score: 146.4 bits (368), Expect = 2.800e-31 Identity = 89/209 (42.58%), Postives = 112/209 (53.59%), Query Frame = 0 Query: 67 RLPVTLLCGYLGSGKTTLLNHILRSAHGKRLAVIENEFGSVSIDDALLPSFXXXXXXXXXXXXXXXXXXXXXEIVLMPNGCLCCRARQDLVTAFMDILEANTHQQKGLPTLSLDGLILELSGLADVGPVVQTFFSDPQVQAQLRLDAIICVVDAHALSRALVLQGGRXXXXXXXXXXXXXXXXXVASLELIAEQLALADRVLLNKMDLL 276 +LPVT+L G+LGSGKTTLLNH+L HGK+ A+IENEFG V +DD L+ EI+ M NGC+CC R DLV IL+ N + + LDG+I+E +G+AD GPVVQTFF++P V A LD II VVDA + + L G EQ+A ADRVLLNK DL+ Sbjct: 10 KLPVTILTGFLGSGKTTLLNHLLTENHGKKFAIIENEFGEVGVDDQLIRQ-VTSPDDIGGGDSRSRKFNMGEEILTMNNGCICCSVRGDLVRLIAQILKRNGDRNQ------LDGIIIETTGMADPGPVVQTFFAEPLVAATCELDGIITVVDAKHILQHLRPGNGVEYE--------------------CEEQIAFADRVLLNKTDLV 191
BLAST of NO19G00590 vs. NCBI_GenBank
Match: ETK77008.1 (hypothetical protein L915_16683 [Phytophthora parasitica] >ETL30451.1 hypothetical protein L916_16589 [Phytophthora parasitica] >ETP06622.1 hypothetical protein F441_17015 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 146.4 bits (368), Expect = 2.800e-31 Identity = 89/209 (42.58%), Postives = 112/209 (53.59%), Query Frame = 0 Query: 67 RLPVTLLCGYLGSGKTTLLNHILRSAHGKRLAVIENEFGSVSIDDALLPSFXXXXXXXXXXXXXXXXXXXXXEIVLMPNGCLCCRARQDLVTAFMDILEANTHQQKGLPTLSLDGLILELSGLADVGPVVQTFFSDPQVQAQLRLDAIICVVDAHALSRALVLQGGRXXXXXXXXXXXXXXXXXVASLELIAEQLALADRVLLNKMDLL 276 +LPVT+L G+LGSGKTTLLNH+L HGK+ A+IENEFG V +DD L+ EI+ M NGC+CC R DLV IL+ N + + LDG+I+E +G+AD GPVVQTFF++P V A LD II VVDA + + L G EQ+A ADRVLLNK DL+ Sbjct: 10 KLPVTILTGFLGSGKTTLLNHLLTENHGKKFAIIENEFGEVGVDDQLIRQ-VTSPDDIGGGDSRSRKFNMGEEILTMNNGCICCSVRGDLVRLIAQILKRNGDRNQ------LDGIIIETTGMADPGPVVQTFFAEPLVAATCELDGIITVVDAKHILQHLRPGNGVEYE--------------------CEEQIAFADRVLLNKTDLV 191
BLAST of NO19G00590 vs. NCBI_GenBank
Match: ETM36871.1 (hypothetical protein L914_16518 [Phytophthora parasitica]) HSP 1 Score: 146.4 bits (368), Expect = 2.800e-31 Identity = 89/209 (42.58%), Postives = 112/209 (53.59%), Query Frame = 0 Query: 67 RLPVTLLCGYLGSGKTTLLNHILRSAHGKRLAVIENEFGSVSIDDALLPSFXXXXXXXXXXXXXXXXXXXXXEIVLMPNGCLCCRARQDLVTAFMDILEANTHQQKGLPTLSLDGLILELSGLADVGPVVQTFFSDPQVQAQLRLDAIICVVDAHALSRALVLQGGRXXXXXXXXXXXXXXXXXVASLELIAEQLALADRVLLNKMDLL 276 +LPVT+L G+LGSGKTTLLNH+L HGK+ A+IENEFG V +DD L+ EI+ M NGC+CC R DLV IL+ N + + LDG+I+E +G+AD GPVVQTFF++P V A LD II VVDA + + L G EQ+A ADRVLLNK DL+ Sbjct: 10 KLPVTILTGFLGSGKTTLLNHLLTENHGKKFAIIENEFGEVGVDDQLIRQ-VTSPDDIGGGDSRSRKFNMGEEILTMNNGCICCSVRGDLVRLIAQILKRNGDRNQ------LDGIIIETTGMADPGPVVQTFFAEPLVAATCELDGIITVVDAKHILQHLRPGNGVEYE--------------------CEEQIAFADRVLLNKTDLV 191
BLAST of NO19G00590 vs. NCBI_GenBank
Match: XP_008912486.1 (hypothetical protein PPTG_16754 [Phytophthora parasitica INRA-310] >ETN02103.1 hypothetical protein PPTG_16754 [Phytophthora parasitica INRA-310]) HSP 1 Score: 146.4 bits (368), Expect = 2.800e-31 Identity = 89/209 (42.58%), Postives = 112/209 (53.59%), Query Frame = 0 Query: 67 RLPVTLLCGYLGSGKTTLLNHILRSAHGKRLAVIENEFGSVSIDDALLPSFXXXXXXXXXXXXXXXXXXXXXEIVLMPNGCLCCRARQDLVTAFMDILEANTHQQKGLPTLSLDGLILELSGLADVGPVVQTFFSDPQVQAQLRLDAIICVVDAHALSRALVLQGGRXXXXXXXXXXXXXXXXXVASLELIAEQLALADRVLLNKMDLL 276 +LPVT+L G+LGSGKTTLLNH+L HGK+ A+IENEFG V +DD L+ EI+ M NGC+CC R DLV IL+ N + + LDG+I+E +G+AD GPVVQTFF++P V A LD II VVDA + + L G EQ+A ADRVLLNK DL+ Sbjct: 10 KLPVTILTGFLGSGKTTLLNHLLTENHGKKFAIIENEFGEVGVDDQLIRQ-VTSPDDIGGGDSRSRKFNMGEEILTMNNGCICCSVRGDLVRLIAQILKRNGDRNQ------LDGIIIETTGMADPGPVVQTFFAEPLVAATCELDGIITVVDAKHILQHLRPGNGVEYE--------------------CEEQIAFADRVLLNKTDLV 191
BLAST of NO19G00590 vs. NCBI_GenBank
Match: ETP34706.1 (hypothetical protein F442_17016 [Phytophthora parasitica P10297]) HSP 1 Score: 146.4 bits (368), Expect = 2.800e-31 Identity = 89/209 (42.58%), Postives = 112/209 (53.59%), Query Frame = 0 Query: 67 RLPVTLLCGYLGSGKTTLLNHILRSAHGKRLAVIENEFGSVSIDDALLPSFXXXXXXXXXXXXXXXXXXXXXEIVLMPNGCLCCRARQDLVTAFMDILEANTHQQKGLPTLSLDGLILELSGLADVGPVVQTFFSDPQVQAQLRLDAIICVVDAHALSRALVLQGGRXXXXXXXXXXXXXXXXXVASLELIAEQLALADRVLLNKMDLL 276 +LPVT+L G+LGSGKTTLLNH+L HGK+ A+IENEFG V +DD L+ EI+ M NGC+CC R DLV IL+ N + + LDG+I+E +G+AD GPVVQTFF++P V A LD II VVDA + + L G EQ+A ADRVLLNK DL+ Sbjct: 10 KLPVTILTGFLGSGKTTLLNHLLTENHGKKFAIIENEFGEVGVDDQLIRQ-VTSPDDIGGGDSRSRKFNMGEEILTMNNGCICCSVRGDLVRLIAQILKRNGDRNQ------LDGIIIETTGMADPGPVVQTFFAEPLVAATCELDGIITVVDAKHILQHLHPGNGVEYE--------------------CEEQIAFADRVLLNKTDLV 191 The following BLAST results are available for this feature:
BLAST of NO19G00590 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO19G00590 ID=NO19G00590|Name=NO19G00590|organism=Nannochloropsis oceanica|type=gene|length=2276bpback to top protein sequence of NO19G00590.1 >NO19G00590.1-protein ID=NO19G00590.1-protein|Name=NO19G00590.1|organism=Nannochloropsis oceanica|type=polypeptide|length=565bpback to top Synonyms
Publications
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