jgi.p|Nanoce1779_2|674156, gene_9725 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|674156
Unique Namegene_9725
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_37:19277..23431 +

Link to JBrowse

Properties
Property NameValue
TranscriptId674242
ProteinId674156
Product nameCobW/HypB/UreG, nucleotide-binding domain-domain containing protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_37supercontigscaffold_37:19277..23431 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL055ncniL055Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO19G00590NO19G00590Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|674156mRNA_9725-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|674156mRNA_9725Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|674156

>mRNA_9725-protein ID=mRNA_9725-protein|Name=jgi.p|Nanoce1779_2|674156|organism=Nannochloropsis oceanica|type=polypeptide|length=901bp
MFVRTSTVPASTSFVPPPSPSEETPLAQPPAIQITSRQPCGSDSNAAAIT
DDSYPPYHRHHLHRRRRRVRAGVLLLWSIVIIAVVVDYSNVGHHHVAHTL
SSFLAWVGRHPAEGAMAFAGVYALCVIFFVPGAALTLGGGFLFGHALGVG
IGTLAASIAVFVGASTGALISFGLGRCLLRDVAQSVLGRYPLLRALDASL
RSDYAVGLVGMLPAVVAYSFLGTTAGAISREAAEGGEEEGGRERKLERVV
RIVMYVLGGVSLVVAVGLMSRYARKELRRMEEEREEEGEEREEGRENEER
EEEREEGLGRERKGSPSRPPSLPCSFPPSPFPFPSTMCRFCERAKVQLSG
EPFTPSTSTSTSSSSSASSSSSSSAPYATYSYAGLSIAERLEIEACALLQ
NKRLPVTLLCGYLGSGKTTLLNHILRSAHGKRLAVIENEFGSVSIDDALL
PSFPPSLPSSSTSSSLRREARKEAEIVLMPNGCLCCRARQDLVTAFMDIL
EANTHQQKGLPTLSLDGLILELSGLADVGPVVQTFFSDPQVQAQLRLDAI
ICVVDAHALSRALVLQGGREGGREGGREGGREGGVEVASLELIAEQLALA
DRVLLNKTDLLEGEGGREGGREGLREYVGEMAPGAVLLECVKGEVEIEQL
LGLEAFSLAKTTMGREEGEGGGNRHGRHDEEGGGGKGHQHTHAQDGKEGG
REGQREGHVHKRLGFTSIGIEVTDGPLEWAAFEQWLGTLLTKSTQPVVAA
PGETASPSLAPSASPSIDEVAAPIPTTAASTSAPAPGEDPSTVPPSTQQQ
RQQRQQQEQVIVRLKGIVYVTKKTPYRRATIVQKRVVLQGIYGHLEMDEA
EIPPSLPSSPSPPPCSKLVVIGRFGDAGALKKEMERGLLECLAPGWYSKR
*
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Synonyms
Publications