NO19G00550, NO19G00550 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO19G00550 vs. NCBI_GenBank
Match: EWM25571.1 (wsc domain containing 1 [Nannochloropsis gaditana]) HSP 1 Score: 238.0 bits (606), Expect = 5.800e-59 Identity = 117/209 (55.98%), Postives = 153/209 (73.21%), Query Frame = 0 Query: 235 IPSLAKCQKSYGNRRFLLDDEKALPPILYSFPGSGNTWTRLLIDFSTGIYTGTILARPKSKPDNDKLPGQGFCTQKVSVIKAHPHQFSPDQLFKVSSSGRTPGRCYRNGNITSFDRFILLTRNPFDAIWSEYRRTANDEHFILRDDFALSHFADVAISKWSHEYKYMLFAFKKIQRKLPE-GILSIQYEEMLNPNLRLSILSKLVEFIG 443 +P+L +C+ SY RRFL ++E+ +PPILYSFPGSGNTWTRLLID STG+++GT+LA+ K K GQG C+++VSV+KAHP+ F P++LF V+ GRC G I +F RFILL RNPFDAIWSEYRRTA + HF L DDF L FA VAISK S YK M+ +FK +++ LPE I S+ YE+ML+ ++R+ ILS + +FIG Sbjct: 280 VPTLEECKASYAKRRFLDENEEVVPPILYSFPGSGNTWTRLLIDISTGVHSGTLLAKRPGKV--SKFEGQGHCSKRVSVLKAHPNHFPPERLFTVT------GRCNDWGGIKAFRRFILLMRNPFDAIWSEYRRTATEAHFFLSDDFDLEAFATVAISKMSRLYKDMIRSFKTVRKTLPEKNIYSMYYEDMLDQDMRMKILSNITDFIG 480
BLAST of NO19G00550 vs. NCBI_GenBank
Match: EWM24512.1 (isoform b [Nannochloropsis gaditana]) HSP 1 Score: 149.8 bits (377), Expect = 2.100e-32 Identity = 91/213 (42.72%), Postives = 124/213 (58.22%), Query Frame = 0 Query: 237 SLAKCQKSYGNRRFLLDDEKALPPILYSFPGSGNTWTRLLIDFSTGIYTGTILARPKSKPDNDKLPGQGFCTQKVSVIKAHPHQFSPDQLFKVSSSGRTPGRCYRNGNI-TSFDRFILLTRNPFDAIWSEY-RRTANDEHFILRDDFAL--SHFADVAISKWSHEYKYMLFAFKKIQRKLP-EGILSIQYEEMLNPNL--RLSILSKLVEFIG 443 S +C YG RRFL + P +LYS+PGSGNT+TRLLID +TG+YTG IL + + LPGQ C V IKAHP QF P +L +G+ P C G + F+RFILL+R+P+ AIWSEY RR N H D A HF VA+ ++ EY L F+ ++ KLP ILS++YE++ ++ R ++L +V F+G Sbjct: 141 SREECSLRYGARRFLDPNPNFTPAVLYSYPGSGNTFTRLLIDHATGVYTGAILGVNDPRL-AEALPGQSHCDSSVIAIKAHPKQFRPLKLL----AGQLPDNCQAEGGLRQGFERFILLSRDPYAAIWSEYQRRLNNGSHHQAADPAAFDPEHFGRVAM-VFAQEYVTTLENFEFLKTKLPRHDILSVKYEDLTTTDVLTREAVLHDIVTFLG 347
BLAST of NO19G00550 vs. NCBI_GenBank
Match: XP_005759647.1 (Hypothetical protein EMIHUDRAFT_198564 [Emiliania huxleyi CCMP1516] >EOD07218.1 Hypothetical protein EMIHUDRAFT_198564 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 110.2 bits (274), Expect = 1.800e-20 Identity = 72/230 (31.30%), Postives = 110/230 (47.83%), Query Frame = 0 Query: 247 NRRFLLDDEKALPPILYSFPGSGNTWTRLLIDFSTGIYTGTILARPKSKPDNDKLPGQGFCTQKVSVIKAHPHQFSPDQLFKVSSSGRTPGRCYRNGNIT-----------SFDRFILLTRNPFDAIWSEYRR--------------TANDEHFILRDD-----------FALSHFADVAISKWSHEYKYMLFAFKKIQRKLPEGILSIQYEEMLNPNLRLSILSKLVEF 441 +R+F ALPP+L++FPGSGNTW RLL+DF+TG YTG++ + P LPG+G C + +KAHP RTPG N+T FD ++LTR+P+ +IW+EY+R + LR F +HF+ A+ + + +++M + ++K L + + YE +L P RL L++LVEF Sbjct: 7 HRQFRQPGSGALPPLLWTFPGSGNTWLRLLLDFATGTYTGSVYSDVSLLP---LLPGEGTCDSRALAVKAHPTNVDFHDFV------RTPGEPGFRLNVTRKPAYLKCAPLRFDALVMLTRDPYASIWAEYKRALAYAEGVGRAPVVATSSCRAALRSQHLHSGGLPAACFNATHFSTFALHQ-ARAWRHMWYHYRK-AAALGLRVHRLAYENLLEPRGRLGALARLVEF 225
BLAST of NO19G00550 vs. NCBI_GenBank
Match: XP_001742512.1 (hypothetical protein [Monosiga brevicollis MX1] >EDQ92750.1 predicted protein [Monosiga brevicollis MX1]) HSP 1 Score: 91.7 bits (226), Expect = 6.800e-15 Identity = 64/199 (32.16%), Postives = 100/199 (50.25%), Query Frame = 0 Query: 259 PPILYSFPGSGNTWTRLLIDFSTGIYTGTILARPKSKPDNDKLPGQGFCTQKVSVIKAHPHQFSPDQLFKVSSSGRTPGRCYRNGNITSFDRFILLTRNPFDAIWSEYRRTANDEHFILRDDFALSHFADVAISK-WSHEYKYML--FAFKKIQ------------RKLPEG-ILSIQYEEMLNPNLRLSILSKLVEFI 442 PP+LYS PGSGNT+ R L+D +TG Y+G++ D LPG+G C VSV+KAHP+ S D L G+TP N FD F ++ R+ + A+++E++R + AL+H K W +++++ + +K + R+LP L + YE ++N R S L +LV F+ Sbjct: 280 PPVLYSAPGSGNTFVRTLLDAATGYYSGSLYL---DATLIDSLPGEGHCNH-VSVVKAHPNMHSVDDLL-----GQTP---TLRRNCGPFDAFAIVIRDFYHAVFAEFQRRYVEVVQASNPRLALNHHVSTLQWKDWDADFRFIWQDYVMRKAKESVATWAQYERLRQLPNSTTLLVSYERLVNSAERASELRRLVSFV 466
BLAST of NO19G00550 vs. NCBI_GenBank
Match: XP_004993560.1 (hypothetical protein PTSG_05694 [Salpingoeca rosetta] >EGD73997.1 hypothetical protein PTSG_05694 [Salpingoeca rosetta]) HSP 1 Score: 85.1 bits (209), Expect = 6.300e-13 Identity = 65/218 (29.82%), Postives = 105/218 (48.17%), Query Frame = 0 Query: 248 RRFLLDDEK-----ALPPILYSFPGSGNTWTRLLIDFSTGIYTGTILARPKSKPDNDKLPGQGFCTQKVSVIKAHPHQFSPD-----QLFKVSSSGRTPGRCYRNGNITSFDRFILLTRNPFDAIWSEYRRTANDEHF--ILRDDFALSHFADVA------ISKWSHEYKYMLFAFKKIQRKLPEG------ILSIQYEEMLNPNLRLSILSKLVEFI 442 RR++ +++ A PP+L + PGSGNTW R+L+++ TG ++ ++ K K + +PG+ C V+K+H H S D +LFK+ G Y + FD I + R+PF A +E R H I R F +D+A W+H YM K+ QR L +G + I++E+M +P L+ L +L+ F+ Sbjct: 113 RRYVTPEDRARLPHAKPPLLLTLPGSGNTWFRMLLEYGTGFFSSSVYNDFKLK---EVMPGELRCDNTTIVVKSHMHLGSYDPEVYNKLFKMQPGELAHG--YPCRELRPFDSVIGIIRDPFHAALAEATRQLTGGHASGISRSRFHNMPQSDIARRLVTQCEMWAH---YM----KEYQRLLRDGFVVARNFILIRFEDMTSPLLKHDTLGRLLRFV 318
BLAST of NO19G00550 vs. NCBI_GenBank
Match: XP_004991370.1 (hypothetical protein PTSG_07574 [Salpingoeca rosetta] >EGD76455.1 hypothetical protein PTSG_07574 [Salpingoeca rosetta]) HSP 1 Score: 84.7 bits (208), Expect = 8.300e-13 Identity = 54/141 (38.30%), Postives = 74/141 (52.48%), Query Frame = 0 Query: 236 PSLAKCQKS---YGNRRFLLD-DEKALPPILYSFPGSGNTWTRLLIDFSTGIYTGTILARPKSKPDNDKLPGQGFCTQKVSVIKAHPHQFSPDQLFK----VSSSGRTPGRCYRNGNITSFDRFILLTRNPFDAIWSEYRR 369 PSL +C S R FL + P +L+S PGSGNT TRLLI+++TG TG+ K D LPG+ C V +K HP +P + K ++ R G C ++ F R I+L RNP DAIW++Y+R Sbjct: 59 PSLLQCDHSDSRLRQRHFLPPAQQHKAPALLWSQPGSGNTMTRLLIEYATGYLTGSPYG---DKSLLDVLPGEDTCDSSVIAVKLHP-LINPRRTNKEDHYTATFKREHGVC---DGVSVFARAIILVRNPLDAIWADYQR 192
BLAST of NO19G00550 vs. NCBI_GenBank
Match: XP_005757047.1 (hypothetical protein EMIHUDRAFT_259515 [Emiliania huxleyi CCMP1516] >EOD04618.1 hypothetical protein EMIHUDRAFT_259515 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 80.5 bits (197), Expect = 1.600e-11 Identity = 35/72 (48.61%), Postives = 48/72 (66.67%), Query Frame = 0 Query: 247 NRRFLLDDEKALPPILYSFPGSGNTWTRLLIDFSTGIYTGTILARPKSKPDNDKLPGQGFCTQKVSVIKAHP 319 +R+F ALPP+L++FPGSGNTW RLL+DF+TG YTG++ + P LPG+G C + +KAHP Sbjct: 7 HRQFRQPGSGALPPLLWTFPGSGNTWLRLLLDFATGTYTGSVYSDVSLLP---LLPGEGTCDSRALAVKAHP 75
BLAST of NO19G00550 vs. NCBI_GenBank
Match: XP_002120962.3 (PREDICTED: WSC domain-containing protein 1-like isoform X1 [Ciona intestinalis] >XP_018668036.1 PREDICTED: WSC domain-containing protein 1-like isoform X2 [Ciona intestinalis]) HSP 1 Score: 74.7 bits (182), Expect = 8.500e-10 Identity = 62/210 (29.52%), Postives = 92/210 (43.81%), Query Frame = 0 Query: 248 RRFLLDDEKALPPILYSFPGSGNTWTRLLIDFSTGIYTGTILARPKSKPDNDKLPGQGFC-------TQKVSVIKAHPH--QFSPDQLFKVSSSGRTPGRCYRNGNITSFDRFILLTRNPFDAIWSEYRRTANDEH--FILRDDFA---LSHFADVAISKWSHEYKYMLFAFKK---------IQRKLPEGILSIQYEEMLNPNLRLSIL 435 + FL K L SFPGSGNTW R L++ +TG+YTG+I + ++ L +GF +K ++IK+H QFS + FD+ IL+ RNPFDAI SE+ R +D H F + F F + KW K L A K+ +Q +PE +++ + PNL ++ Sbjct: 253 KHFLHSQNKTDLTGLISFPGSGNTWIRHLLEQATGLYTGSIYS-------DEHLYRKGFLGEIEKWQLKKCAIIKSHKETLQFS-----------------------SHFDKLILVIRNPFDAILSEFNRCLSDSHTGFANQSSFTGKKWPKFVPYKMQKWIRIIKVHLEARKETTVVFYENLVQNPIPELRRVVKFTGLHIPNLEARLI 432
BLAST of NO19G00550 vs. NCBI_GenBank
Match: ELU11434.1 (hypothetical protein CAPTEDRAFT_193836 [Capitella teleta]) HSP 1 Score: 73.6 bits (179), Expect = 1.900e-9 Identity = 48/140 (34.29%), Postives = 71/140 (50.71%), Query Frame = 0 Query: 242 QKSYGNRRFLLD-----DEKALPPI--LYSFPGSGNTWTRLLIDFSTGIYTGTILARPKSKPDNDKLPGQGFCTQKVSVIKAHPHQFSPDQLFKVSSSGRTPGRCYRNGNITSFDRFILLTRNPFDAIWSEYRRTANDEH 375 +K + NR LD +E +L P+ L S+PGSGNTWTR LI+ STG YTG+I K K PG+G + V +K H + +L +V ++R +L+ R P DA+ +E++RT+ H Sbjct: 144 RKIHRNRTSCLDKTFAGNETSLLPLTALASYPGSGNTWTRHLIELSTGFYTGSIY---KDKVLKVSFPGEGEQSGSVITVKTH-WPWVTKKLDRV-----------------EYERVVLIIRTPLDAMKAEFKRTSKRSH 262
BLAST of NO19G00550 vs. NCBI_GenBank
Match: ELU11425.1 (hypothetical protein CAPTEDRAFT_193827 [Capitella teleta]) HSP 1 Score: 72.4 bits (176), Expect = 4.200e-9 Identity = 59/202 (29.21%), Postives = 90/202 (44.55%), Query Frame = 0 Query: 262 LYSFPGSGNTWTRLLIDFSTGIYTGTILARPKSKPDNDKLPGQGFCTQKVSVIKAHPHQFSPDQLFKVSSSGRTPGRCYRNGNITSFDRFILLTRNPFDAIWSEY--RRTANDEHFILRDDFALSHFADVAISKWSHEYKYMLFAFKK-------IQRKLPEGILSIQYEEMLNPNLRLSILSKLVEFIGKLNIISISSCQH 455 L SFPGSGNTWTR LI+ STG YTG I K PG+G ++ V +K H +F RT R ++R +L+TR P DA+ +E+ +RT N H + V + W ++ K + +++ I +K +L + Y++M + + L L F+G +I C H Sbjct: 103 LASFPGSGNTWTRHLIELSTGFYTGAIY---KDGLLKKAFPGEGNRSRSVIAVKTHWPRF------------RTVDR-------VEYERVVLITRTPLDAMKAEFTRQRTPNRSH--------VGQIQTVNQTAWQNQVKVQIPEYQRFYDFWFDITKKKSMDLLVLFYDDMRDNTTQ--TLINLAHFLGISDIRDQLPCIH 272 The following BLAST results are available for this feature:
BLAST of NO19G00550 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO19G00550 ID=NO19G00550|Name=NO19G00550|organism=Nannochloropsis oceanica|type=gene|length=2692bpback to top protein sequence of NO19G00550.1 >NO19G00550.1-protein ID=NO19G00550.1-protein|Name=NO19G00550.1|organism=Nannochloropsis oceanica|type=polypeptide|length=529bpback to top protein sequence of NO19G00550.2 >NO19G00550.2-protein ID=NO19G00550.2-protein|Name=NO19G00550.2|organism=Nannochloropsis oceanica|type=polypeptide|length=474bpback to top Synonyms
Publications
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