NO19G00530, NO19G00530 (gene) Nannochloropsis oceanica

Overview
NameNO19G00530
Unique NameNO19G00530
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2495
Alignment locationchr19:206960..209454 +

Link to JBrowse

Properties
Property NameValue
DescriptionF-box/RNI-like superfamily protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr19genomechr19:206960..209454 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR006553Leu-rich_rpt_Cys-con_subtyp
Homology
BLAST of NO19G00530 vs. NCBI_GenBank
Match: CCI43003.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 130.6 bits (327), Expect = 9.600e-27
Identity = 109/300 (36.33%), Postives = 164/300 (54.67%), Query Frame = 0
Query:   15 RIILSFPAKA-------LTAAAVERADAVLSHDKEGRQTVKQEVIDALIKDNRFLDETMPLSFYEEDQRRLSFKGASKMTESLLEQVCAIIPALECLDLSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKFNRQLQALHVGGNFNMTQEGLIRLLSTHPNRANFEEFYCSGIHFTSPLLLALAAHCPTLRGLGIGYNHLMTEEALLTLLRHLKRLRSLHVPWCQRAITDSLLQSLGDECPALEELDICGVKGVTAEGIEALLQKTNRHTADD-------ASMDVDPPRK 301
            +++L + +KA       +T   + R   +   +K     VKQ++I AL+K+ R  D+T+P  F+ E   ++   GA K++  L+E+  AI   +  ++ S                 XXXXXXXXXXXXXXXXXXXXXXX    +LQ + VGGNFNMT +G+ R +  HPNR+ F + + SG   T   L  + A C  LR L +GY+ L +++A++T L H K +  L + W   AITD LL+ +   CP L EL++CGVK V++  +  +L++  +   D        A  +  PPRK
Sbjct:   12 QLVLKYISKAGKEVSDIITEETITRLHRISKPNKIRTNKVKQQLIHALLKNGRLGDDTLPACFFHESMAQIDLSGA-KISSVLMEKFSAICSNIHAVNFSGCFRLTDNAIEILLRKCXXXXXXXXXXXXXXXXXXXXXXXIHASKLQCIDVGGNFNMTIQGITRFVEKHPNRSRFHKLHISGHFVTEHALRVVMAKCKKLRSLSVGYSSL-SDDAIITFLTHRKSITRLSIHW-NGAITDKLLRFMAIGCPNLVELNLCGVKSVSSNALLEMLKQKMKEVPDADPGRVSVAGEETPPPRK 308          
BLAST of NO19G00530 vs. NCBI_GenBank
Match: CCA18655.1 (conserved hypothetical protein [Albugo laibachii Nc14])

HSP 1 Score: 120.9 bits (302), Expect = 7.600e-24
Identity = 101/280 (36.07%), Postives = 154/280 (55.00%), Query Frame = 0
Query:   15 RIILSFPAKA-------LTAAAVERADAVLSHDKEGRQTVKQEVIDALIKDNRFLDETMPLSFYEEDQRRLSFKGASKMTESLLEQVCAIIPALECLDLSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKFNRQLQALHVGGNFNMTQEGLIRLLSTHPNRANFEEFYCSGIHFTSPLLLALAAHCPTLRGLGIGYNHLMTEEALLTLLRHLKRLRSLHVPWCQRAITDSLLQSLGDECPALEELDICGVKGVTAEGIEALLQKTNRHT 288
            +++L + +KA       +T   + R   +   +K     VKQ++I AL+K+ R  D+T+P  F+     R+   GA K++  L+E+  +I   +  ++ S                XXXXXXXXXXXXXXXXXXXXXXXX    +LQ + VGGNFNMT  G+ R +  HPNR+ F + + SG       L  + A C  LR L +GY+ L +++A +  L + K +  L + W   AITD LL+ +  +CP L EL++CGV  V++  +  LL++  + T
Sbjct:   12 QLVLKYISKAGKEVNDIITEETITRLHRISKPNKSRTNRVKQQLIHALLKNGRLGDDTLPTCFFHVSMTRMDLSGA-KISSLLMEEFASICSKIHTVNFSGCFRLTDNAIEVLLRKXXXXXXXXXXXXXXXXXXXXXXXXXXXTKLQCIDVGGNFNMTLPGITRFVEKHPNRSRFHKLHVSGHFLNEHALRVVMAKCKKLRSLSVGYSSL-SDDAFIAFLTNRKSITRLSLHW-NGAITDKLLRFMATDCPNLVELNLCGVTSVSSNALLELLRQKMKDT 288          
BLAST of NO19G00530 vs. NCBI_GenBank
Match: OWZ23478.1 (hypothetical protein PHMEG_0001646 [Phytophthora megakarya])

HSP 1 Score: 108.6 bits (270), Expect = 3.900e-20
Identity = 119/331 (35.95%), Postives = 174/331 (52.57%), Query Frame = 0
Query:   15 RIILSFPAKA-------LTAAAVERADAVLSHDKEGRQTVKQEVIDALIKDNRFLDETMPLSFYEEDQRRLSFKGASKMTESLLEQVCAIIPALECLDLSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKFNRQLQALHVGGNFNMTQEGLIRLLSTHPNRANFEEFYCSGIHFTSPLLLALAAHCPTLRGLGIGYNHLMTEEALLTLLRHLKRLRSLHVPWCQRAITDSLLQSLGDECPALEELDICGVKGVTAEGIEALLQKTNRHTADDASMD-VDPPRKXXXXXXXXXXXXXXXXRLKIRYAGLNRANIQAIEERW 338
            +++L F +KA       L    ++R+  +L   K      KQEVI AL++  R  D+T+P SF+     R+   GA K++ + +E +  I P L  ++ S      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX             NFNMT  G+ +L+  HPN + F + + SG   T   +  + A C  L  L +GY   +T+EAL+ LL+  + +  L + W   AI+D L++ LG E   L+EL++CGVK V+A+ I A +     H    A  + +DP                   ++  RY  + +    A++ER+
Sbjct:   12 KMVLKFISKAPRQLDVILNEQTLDRSHRILKPAKSRTHKAKQEVIRALLRGGRLGDDTLPASFFHSSMTRVEIIGA-KISTTFVEMLSKICPKLHSVNFSGCFRLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNFNMTIPGITKLIEKHPNHSKFTKVHVSGHPVTDQTIKTIMAKCRKLHSLSVGY-CAITDEALIALLKKRESVSRLCLHW-NVAISDQLMRFLGSEARNLQELNLCGVKSVSADAIVAAI-----HAKMGARTELLDPTLSHPSPDENPEPERKRLKKIDFRYTTITKEAAAAVKERY 334          
BLAST of NO19G00530 vs. NCBI_GenBank
Match: GAX92096.1 (Hypothetical protein PINS_000007 [Pythium insidiosum])

HSP 1 Score: 103.6 bits (257), Expect = 1.300e-18
Identity = 88/262 (33.59%), Postives = 135/262 (51.53%), Query Frame = 0
Query:   23 KALTAAAVERADAVLSHDKEGRQTVKQEVIDALIKDNRFLDETMPLSFYEEDQRRLSFKGASKMTESLLEQVCAIIPALECLDLSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKFNRQLQALHVGGNFNMTQEGLIRLLSTHPNRANFEEFYCSGIHFTSPLLLALAAHCPTLRGLGIGYNHLMTEEALLTLLRHLKRLRSLHVPWCQRAITDSLLQSLGDECPALEELDICGVKGVTAEGIEALLQKTN 285
            K +    VER   +    K     VKQE++ A+++  RF D+T+P SF+     RL   GA +++   + ++  +   L  ++ S                    XXXXXXXXXXXXXXXXXXXX    +LQ++ +GGNFNMT  G+ + +  HPN + F   + SG   T   +  + A C  +  L IGY   +++EA++ LL   + +  L + W   AITD LL  +      ++EL++CGVK +T +   A   KT+
Sbjct:   27 KIVNEQTVERTHRISKPSKSRTHKVKQELLRAMLQSGRFTDDTLPDSFFHASMTRLEITGA-RISTKFIARLTKVCTKLHTINFSGCFRLTDDAIEVLLTNCPEIXXXXXXXXXXXXXXXXXXXXXXXPKLQSIDIGGNFNMTVAGITKFIEKHPNHSKFTRVHISGHAITDQTVRTIMAKCRKIHSLAIGY-CAVSDEAIIALLTKRESISRLCLHW-NVAITDQLLHFIATNGRNIQELNLCGVKTITPDVSHATPSKTS 285          
BLAST of NO19G00530 vs. NCBI_GenBank
Match: OQS07538.1 (Hect-domain containing peotein [Thraustotheca clavata])

HSP 1 Score: 102.8 bits (255), Expect = 2.100e-18
Identity = 108/262 (41.22%), Postives = 150/262 (57.25%), Query Frame = 0
Query:   20 FPAKALTAAAVERADAVLSHDKEGRQTVKQEVIDALIKDNRFLDETMPLSFYEEDQRRLSFKGASKMTESLLEQVCAIIPALECLDLSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKFNRQLQALHVGGNFNMTQEGLIRLLSTHPNRANFEEFYCSGIHFTSPLLLALAAHCPTLRGLGIGYNHLMTEEALLTLLRHLKRLRSLHVPWCQRAITDSLLQSLGDECPALEELDICGVKGVTAEGIEALLQ 282
            +  + L    +E+A  +    +     +KQEVI A+I+  RF D+T+P  F+     R+   GA ++T + +E++  I+P L  ++ S   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                    G+ R +  HPN + F + + SG   T   L  +AA C  ++ L IGY  L +++AL+ LL+  + +  L + W  R ITD LL  L   CP L ELDICGVK V+++ I + LQ
Sbjct: 3841 YSTEILNDTTIEKAHRIADPARSRTHKLKQEVIHAVIQTGRFNDDTLPTIFFHPSMTRIEINGA-RITTAFIERIARIMPKLHHVNFSGCFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGITRFVEKHPNHSKFIKLHISGHAATDHTLKVIAAKCRKIQSLSIGYCGL-SDDALIALLQRRESISKLRLHWNTR-ITDRLLDHLARNCPNLIELDICGVKTVSSDAINSFLQ 4099          
BLAST of NO19G00530 vs. NCBI_GenBank
Match: XP_008892981.1 (hypothetical protein PPTG_01427 [Phytophthora parasitica INRA-310] >ETI45502.1 hypothetical protein F443_09928 [Phytophthora parasitica P1569] >ETL38900.1 hypothetical protein L916_09629 [Phytophthora parasitica] >ETL92005.1 hypothetical protein L917_09552 [Phytophthora parasitica] >ETM45301.1 hypothetical protein L914_09595 [Phytophthora parasitica] >ETN21155.1 hypothetical protein PPTG_01427 [Phytophthora parasitica INRA-310] >ETO74163.1 hypothetical protein F444_10023 [Phytophthora parasitica P1976] >ETP15328.1 hypothetical protein F441_09877 [Phytophthora parasitica CJ01A1] >ETP43402.1 hypothetical protein F442_09831 [Phytophthora parasitica P10297])

HSP 1 Score: 100.1 bits (248), Expect = 1.400e-17
Identity = 107/273 (39.19%), Postives = 150/273 (54.95%), Query Frame = 0
Query:   15 RIILSFPAKA-------LTAAAVERADAVLSHDKEGRQTVKQEVIDALIKDNRFLDETMPLSFYEEDQRRLSFKGASKMTESLLEQVCAIIPALECLDLSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKFNRQLQALHVGGNFNMTQEGLIRLLSTHPNRANFEEFYCSGIHFTSPLLLALAAHCPTLRGLGIGYNHLMTEEALLTLLRHLKRLRSLHVPWCQRAITDSLLQSLGDECPALEELDICGVKGVTAEGIEALL 281
            +++L F +KA       +    +ERA  +    K      KQEVI AL++  +  D+T+P SF+     R+   GA K++   +E +    P L  ++ S        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX              FNMT  G+ +L+  HPN + F + + SG   T   +  + A C  L  L +GY   +T+EAL+ LL+  + +  L + W   AITD LL+ LG E   L+EL++CGVK V+A+ I A +
Sbjct:   12 KMVLKFISKAPRQLDVIINEKTLERAHRIGKPSKSRTHKAKQEVIRALLRGGKLGDDTLPQSFFHPTMTRVEIIGA-KISTVFVEMLSKTCPKLHSVNFSGCFRLTDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFNMTISGITKLIEKHPNHSKFTKVHISGHPATDQTIKTIMAKCRKLHSLSVGY-CAITDEALIALLKKRESVSRLCLHW-NVAITDQLLRFLGSEARNLQELNLCGVKSVSADAIVAAI 281          
BLAST of NO19G00530 vs. NCBI_GenBank
Match: ETK85456.1 (hypothetical protein L915_09725 [Phytophthora parasitica])

HSP 1 Score: 100.1 bits (248), Expect = 1.400e-17
Identity = 107/273 (39.19%), Postives = 150/273 (54.95%), Query Frame = 0
Query:   15 RIILSFPAKA-------LTAAAVERADAVLSHDKEGRQTVKQEVIDALIKDNRFLDETMPLSFYEEDQRRLSFKGASKMTESLLEQVCAIIPALECLDLSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKFNRQLQALHVGGNFNMTQEGLIRLLSTHPNRANFEEFYCSGIHFTSPLLLALAAHCPTLRGLGIGYNHLMTEEALLTLLRHLKRLRSLHVPWCQRAITDSLLQSLGDECPALEELDICGVKGVTAEGIEALL 281
            +++L F +KA       +    +ERA  +    K      KQEVI AL++  +  D+T+P SF+     R+   GA K++   +E +    P L  ++ S        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX              FNMT  G+ +L+  HPN + F + + SG   T   +  + A C  L  L +GY   +T+EAL+ LL+  + +  L + W   AITD LL+ LG E   L+EL++CGVK V+A+ I A +
Sbjct:   12 KMVLKFISKAPRQLDVIINEKTLERAHRIGKPSKSRAHKAKQEVIRALLRGGKLGDDTLPQSFFHPTMTRVEIIGA-KISTVFVEMLSKTCPKLHSVNFSGCFRLTDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFNMTISGITKLIEKHPNHSKFTKVHISGHPATDQTIKTIMAKCRKLHSLSVGY-CAITDEALIALLKKRESVSRLCLHW-NVAITDQLLRFLGSEARNLQELNLCGVKSVSADAIVAAI 281          
BLAST of NO19G00530 vs. NCBI_GenBank
Match: KUF85915.1 (F-box/LRR-repeat protein 7 [Phytophthora nicotianae])

HSP 1 Score: 98.6 bits (244), Expect = 4.000e-17
Identity = 107/273 (39.19%), Postives = 149/273 (54.58%), Query Frame = 0
Query:   15 RIILSFPAKA-------LTAAAVERADAVLSHDKEGRQTVKQEVIDALIKDNRFLDETMPLSFYEEDQRRLSFKGASKMTESLLEQVCAIIPALECLDLSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKFNRQLQALHVGGNFNMTQEGLIRLLSTHPNRANFEEFYCSGIHFTSPLLLALAAHCPTLRGLGIGYNHLMTEEALLTLLRHLKRLRSLHVPWCQRAITDSLLQSLGDECPALEELDICGVKGVTAEGIEALL 281
            +++L F +KA       +    +ERA  +    K      KQEVI AL++  +  D+T+P SF      R+   GA K++   +E +    P L  ++ S        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX              FNMT  G+ +L+  HPN + F + + SG   T   +  + A C  L  L +GY   +T+EAL+ LL+  + +  L + W   AITD LL+ LG E   L+EL++CGVK V+A+ I A +
Sbjct:   12 KMVLKFISKAPRQLDVIINEKTLERAHRIGKPSKSRTHKAKQEVIRALLRGGKLGDDTLPQSFXHPTMTRVEIIGA-KISTVFVEMLSKTCPKLHSVNFSGCFRLTDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFNMTISGITKLIEKHPNHSKFTKVHISGHPATDQTIKTIMAKCRKLHSLSVGY-CAITDEALIALLKKRESVSRLCLHW-NVAITDQLLRFLGSEARNLQELNLCGVKSVSADAIVAAI 281          
BLAST of NO19G00530 vs. NCBI_GenBank
Match: KUF97610.1 (GTP-binding nuclear protein Ran [Phytophthora nicotianae])

HSP 1 Score: 98.2 bits (243), Expect = 5.300e-17
Identity = 76/273 (27.84%), Postives = 118/273 (43.22%), Query Frame = 0
Query:   15 RIILSFPAKA-------LTAAAVERADAVLSHDKEGRQTVKQEVIDALIKDNRFLDETMPLSFYEEDQRRLSFKGASKMTESLLEQVCAIIPALECLDLSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKFNRQLQALHVGGNFNMTQEGLIRLLSTHPNRANFEEFYCSGIHFTSPLLLALAAHCPTLRGLGIGYNHLMTEEALLTLLRHLKRLRSLHVPWCQRAITDSLLQSLGDECPALEELDICGVKGVTAEGIEALL 281
            +++L F +KA       +    +ERA  +    K      KQEVI AL++  +  D+T+P SF+     R+   GA K++   +E                                                              ++ VGGNFNMT  G+ +L+  HPN + F + + SG   T   +  + A C  L  L +GY   +T+EAL+ LL+  + +  L + W   AITD LL+ LG E   L+EL++CGVK V+A+ I A +
Sbjct:   12 KMVLKFISKAPRQLDVIINEKTLERAHRIGKPSKSRTHKAKQEVIRALLRGGKLGDDTLPQSFFHPTMTRVEIIGA-KISTVFVE-------------------------------------------------------------MSIDVGGNFNMTISGITKLIEKHPNHSKFTKVHISGHPATDQTIKTIMAKCRKLHSLSVGY-CAITDEALIALLKKRESVSRLCLHW-NVAITDQLLRFLGSEARNLQELNLCGVKSVSADAIVAAI 220          
BLAST of NO19G00530 vs. NCBI_GenBank
Match: XP_008867544.1 (hypothetical protein H310_04813 [Aphanomyces invadans] >ETW03315.1 hypothetical protein H310_04813 [Aphanomyces invadans])

HSP 1 Score: 93.2 bits (230), Expect = 1.700e-15
Identity = 91/271 (33.58%), Postives = 136/271 (50.18%), Query Frame = 0
Query:   16 IILSFPAK-----ALTAAAVERADAVLSHDKEGRQTVKQEVIDALIKDNRFLDETMPLSFYEEDQRRLSFKGASKMTESLLEQVCAIIPALECLDLSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKFNRQLQALHVGGNFNMTQEGLIRLLSTHPNRANFEEFYCSGIHFTSPLLLALAAHCPTLRGLGIGYNHLMTEEALLTLLRHLKRLRSLHVPWCQRAITDSLLQSLGDECPALEELDICGVKGVTAEGIEALLQ 282
            +IL F +K      L   A+ RA  +    +     VKQ++I A+++  RF D+T+P +F+  +  ++   GA K++   + ++ A+   L  ++ S                   XXXXXXXXXXXXXXXXXXXXX                     +   +  HPN + F + + SG   T   L  +A  C  L+ L +GY  L T++AL+ LL     + +LH+ W  R ITD LL  +G +CP L+EL++CGVK VT + I A LQ
Sbjct:   13 LILKFMSKRYAPDMLNDMAIARAHRICDPSRSKTHKVKQDLIRAVLQTGRFSDDTLPTAFFHPNLTKIEINGA-KISTVFVNRMAAVTVNLHHVNFSGCFRLTDDSILALLQHCPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXITSFIELHPNHSKFLKVHISGHRVTDHTLKVIANKCRKLQSLAVGYCGL-TDDALIALLDRRPSISALHLHWNYR-ITDRLLDHMGRQCPNLQELNLCGVKTVTNDAIYAFLQ 280          
The following BLAST results are available for this feature:
BLAST of NO19G00530 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
CCI43003.19.600e-2736.33unnamed protein product [Albugo candida][more]
CCA18655.17.600e-2436.07conserved hypothetical protein [Albugo laibachii N... [more]
OWZ23478.13.900e-2035.95hypothetical protein PHMEG_0001646 [Phytophthora m... [more]
GAX92096.11.300e-1833.59Hypothetical protein PINS_000007 [Pythium insidios... [more]
OQS07538.12.100e-1841.22Hect-domain containing peotein [Thraustotheca clav... [more]
XP_008892981.11.400e-1739.19hypothetical protein PPTG_01427 [Phytophthora para... [more]
ETK85456.11.400e-1739.19hypothetical protein L915_09725 [Phytophthora para... [more]
KUF85915.14.000e-1739.19F-box/LRR-repeat protein 7 [Phytophthora nicotiana... [more]
KUF97610.15.300e-1727.84GTP-binding nuclear protein Ran [Phytophthora nico... [more]
XP_008867544.11.700e-1533.58hypothetical protein H310_04813 [Aphanomyces invad... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR055ncniR055Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR039ngnoR039Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO19G00530.1NO19G00530.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO19G00530.2NO19G00530.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|659275gene_9733Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO19G00530.1NO19G00530.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO19G00530.2NO19G00530.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO19G00530 ID=NO19G00530|Name=NO19G00530|organism=Nannochloropsis oceanica|type=gene|length=2495bp
ACAACCCATCACACAGAGAGATGAGCAATCGGGAGGGCAACACCCTGAAA
GATGTAGCCATGCGGATCATTTTGAGTTTCCCAGCGAAAGCTTTGACGGC
GGCGGCGGTGGAAAGAGCTGATGCAGTCCTTTCGGTAGGGTAGGGTAGAG
TGGCTCAAGAGGGGGGAGCGTAGGACGTTGGGAGGGCTGAAGGAGGCTGA
AAATGGCGTAAAAGTTAAGGACGTAGATCTTTTTTAATTTTGCGAAGTGG
GGGTGGATATCTGGGATCACTTTTATTCATCTCCAACCCCCCCCTTTCCC
TTTCCAGCACGACAAGGAAGGCCGCCAAACTGTGAAGCAAGAAGTGATCG
ACGCCTTGATCAAAGACAACCGGTTCCTGGACGAGACGATGCCGTTGTCA
TTCTACGAAGAGGACCAACGGAGACTTTCGTTCAAAGGCGCCAGTAAGgt
gggtgacacaggggagggagggaacaagggaagggaagacacttgtgacc
aacgtacacccttcttctaaactcgcagATGACAGAATCCCTCCTTGAGC
AAGTCTGCGCCATCATTCCTGCCCTTGAGgtgagtctttggcccggaaat
acggagttgctcgcgccttccctcacgcccttcctcctcccctccctccc
tccctccctccctcagTGCCTAGACCTTTCGGCCTGCTTTTCGTTGACAG
ACAGCGCCTTGCCCCTCGCCCTAAGTCATTGCCCGTCCCTCAAGACCTTA
AAGCTGGAGAACTGCCGCAAGCTGACAGACGCGGCTTTCGATCACATTGT
AAAGgtaaggaaggaatggaaggagggagggagggaaggagggaaggaag
gagggttggatcggccagatgagtgtacagctccatccatgcatccttcc
cccccctcctgtgtaatattctcttttctgggtagTTTAACAGGCAGCTG
CAAGCCCTGCACGTGGGCGGCAACTTCAACATGACGCAAGAGGGGCTCAT
CCGCCTCCTCTCCACCCACCCCAACCGCGCCAAgtgagacttcccccccc
cacctctctctctctctctctctctctctcctctctctctctctctctct
ctctctctctctcgatttcttttcctcccttcctccctggctagctgcat
ttgttcctccttactgtcctctaagtcttccctccatcaatcagtatgat
ggccaactcgtcactcacctttcccttcctccccccaccttcctccctcc
ctcccttttcagCTTCGAGGAATTCTACTGCTCTGGCATCCACTTCACCT
CCCCCCTCCTCCTCGCCCTCGCTGCGCATTGCCCCACACTAAGGGGTTTG
GGGATCGGATATAATCATTTGATGACCGAAGAGgtgaggagggagggtgg
gagggagggagggagagagagagggaaggtcgattgcgcgagcaagtaag
gcactgcccattctcccgaccaccattcctcagacccccaatctccctcc
ccccctccctccctccctccctcccccctccctccccccctccctccctc
agGCTCTCTTAACCCTCCTGCGGCATTTGAAGCGGCTTCGTTCGCTGCAC
GTGCCCTGGTGCCAACGGGCCATCACCGACTCCCTCCTCCAGgtacaccc
tccctccctccctccctccctccctccctccttccttcctttcttcctat
cttccttccctccgttcttaatcacagggttcctttcccatcatttgtct
atctcctgtcgtcaacggaagagaagagagaaagtcgtttttcgctagtg
ttgcacgcccatgacgtcagtcactgccttgtcgatttctcgtgtcatgc
tgaagcgtgtgaagcctaaatcctgccatgtctcaccccacctccttgcc
cgcccgcccgcccgcccgccctccctccctccctccctccctccctagTC
CCTGGGCGACGAGTGTCCGGCGCTCGAGGAGTTGGACATATGCGGGGTTA
AGGGCGTAACGGCCGAGGGGATAGAGGCTTTGCTGCAGAAGACCAACCGG
CACACGGCAGgtgagggagggagggagggagggagggagaaaggttcttc
tttgcctgtgtggaccgcacaatgtcctcatctcccattctccttccctt
cctcacttcctccctccctccctccctccctccctctcttcttcagACGA
TGCAAGCATGGACGTGGACCCCCCGCGGAAGGAGGGAAGGAAGGAAGGAA
GGAGGGAGGGAGGGAGGAAGCGGCTGAGGCGCTTGAAGATAAGGTACGCG
GGGTTGAACCGTGCGAACATTCAGGCAATAGAAGAGAGGTGGAGGGAGGA
GGTGGAATTTCTAAATTGAGCGAGGCAGGGAGGGAGGGGTGTACAGTGTT
GCACAAAGAACGATTGGACTATATGGTAAAAAAGGAAGCAAAACACACCA
AAAATCATATAAATTGAATTTCAAATCGATATCATCGACGGGGAG
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protein sequence of NO19G00530.1

>NO19G00530.1-protein ID=NO19G00530.1-protein|Name=NO19G00530.1|organism=Nannochloropsis oceanica|type=polypeptide|length=346bp
MSNREGNTLKDVAMRIILSFPAKALTAAAVERADAVLSHDKEGRQTVKQE
VIDALIKDNRFLDETMPLSFYEEDQRRLSFKGASKMTESLLEQVCAIIPA
LECLDLSACFSLTDSALPLALSHCPSLKTLKLENCRKLTDAAFDHIVKFN
RQLQALHVGGNFNMTQEGLIRLLSTHPNRANFEEFYCSGIHFTSPLLLAL
AAHCPTLRGLGIGYNHLMTEEALLTLLRHLKRLRSLHVPWCQRAITDSLL
QSLGDECPALEELDICGVKGVTAEGIEALLQKTNRHTADDASMDVDPPRK
EGRKEGRREGGRKRLRRLKIRYAGLNRANIQAIEERWREEVEFLN*
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protein sequence of NO19G00530.2

>NO19G00530.2-protein ID=NO19G00530.2-protein|Name=NO19G00530.2|organism=Nannochloropsis oceanica|type=polypeptide|length=281bp
MPLSFYEEDQRRLSFKGASKMTESLLEQVCAIIPALECLDLSACFSLTDS
ALPLALSHCPSLKTLKLENCRKLTDAAFDHIVKFNRQLQALHVGGNFNMT
QEGLIRLLSTHPNRANFEEFYCSGIHFTSPLLLALAAHCPTLRGLGIGYN
HLMTEEALLTLLRHLKRLRSLHVPWCQRAITDSLLQSLGDECPALEELDI
CGVKGVTAEGIEALLQKTNRHTADDASMDVDPPRKEGRKEGRREGGRKRL
RRLKIRYAGLNRANIQAIEERWREEVEFLN*
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