NO19G00440, NO19G00440 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO19G00440 vs. NCBI_GenBank
Match: EWM23542.1 (hypothetical protein Naga_100339g4 [Nannochloropsis gaditana]) HSP 1 Score: 165.2 bits (417), Expect = 2.300e-37 Identity = 73/127 (57.48%), Postives = 93/127 (73.23%), Query Frame = 0
Query: 37 ALHAPLLPSSFSSDEPPLTLYEDGYLKLTPTKLKVKCYFFPFGLAKTIPLKDIKKVSLLPLGSMWQGQYKHWGMAVDFQRWWPSDLRRAGRTHFIEVDCGSWPRVAFTVNDPENVYLLLSQAMAVAK 164
AL PLL ++ LYED ++KLT + L++K Y+FP G +K IPLK I+K+SL PLGS WQGQYKHWGMA+DF+RWWPSD+ R R HFIEVDCG+WP VAFT+ + E+ Y LSQA+A +
Sbjct: 45 ALQKPLLDATRPEPVGASILYEDDFIKLTGSSLRIKWYYFPIGASKVIPLKSIQKISLRPLGSTWQGQYKHWGMAIDFKRWWPSDMLRHQRAHFIEVDCGTWPLVAFTLKESEDFYRSLSQAVAAVR 171
BLAST of NO19G00440 vs. NCBI_GenBank
Match: EWM23543.1 (hypothetical protein Naga_100339g4 [Nannochloropsis gaditana]) HSP 1 Score: 120.2 bits (300), Expect = 8.500e-24 Identity = 58/113 (51.33%), Postives = 75/113 (66.37%), Query Frame = 0
Query: 37 ALHAPLLPSSFSSDEPPLTLYEDGYLKLTPTKLKVKCYFFPFGLAKTIPLKDIKKVSLLPLGSMWQGQYKHWGMAVDFQRWWPSDLRRAGRTHFI--EVDCGSWPRVAFTVND 148
AL PLL ++ LYED ++KLT + L++K Y+FP G +K IPLK I+K+SL PLGS WQGQYKHWGMA+DF+RWWPSD+ R R + V GS P ++ND
Sbjct: 45 ALQKPLLDATRPEPVGASILYEDDFIKLTGSSLRIKWYYFPIGASKVIPLKSIQKISLRPLGSTWQGQYKHWGMAIDFKRWWPSDMLRHQRVGRLWGNVSEGSVPHGFGSLND 157
BLAST of NO19G00440 vs. NCBI_GenBank
Match: WP_102145222.1 (hypothetical protein [Mycobacterium sp. QGD 101]) HSP 1 Score: 78.6 bits (192), Expect = 2.800e-11 Identity = 39/109 (35.78%), Postives = 66/109 (60.55%), Query Frame = 0
Query: 52 PPLTLYEDGYLKLTPTKLKVKCYFFPFGLAKTIPLKDIKKVSLLPLGSMWQGQYKHWGMAVDFQRWWPSDLRRAGRTHFIEVDC-GSWPRVAFTVNDPENVYLLLSQAM 160
PP Y+DG ++L + ++ Y FP G +K IPL+DI+ + PLG+ W +++ WG + D +RW P D+RR ++ I +D G++P AFT +DP++ L + +
Sbjct: 3 PPRQYYDDGLIQLDREAITLRRYHFPSGTSKVIPLRDIRGYTAKPLGT-WLHRFRIWGSS-DLRRWLPLDVRRPLKSTLITLDVPGTFPSPAFTPSDPDDFVAKLDELL 109
BLAST of NO19G00440 vs. NCBI_GenBank
Match: WP_085136075.1 (hypothetical protein [Mycobacterium hiberniae] >ORV69129.1 hypothetical protein AWC09_13665 [Mycobacterium hiberniae]) HSP 1 Score: 75.9 bits (185), Expect = 1.800e-10 Identity = 42/106 (39.62%), Postives = 59/106 (55.66%), Query Frame = 0
Query: 57 YEDGYLKLTPTKLKVKCYFFPFGLAKTIPLKDIKKVSLLPLGSMWQGQYKHWGMAVDFQRWWPSDLRRAGRTHFIEVDC--GSWPRVAFTVNDPENVYLLLSQAMA 161
Y+DG + L + ++ Y FP G AK IPL I++ PLG M+ +++ WG + D +RW P D+RR R+ I +D WPR AFT DPE LL + A
Sbjct: 10 YDDGLVALDRRAITLRRYHFPSGTAKVIPLSAIRRYRTEPLG-MFTHRFRIWGSS-DLRRWLPLDVRRPVRSTLITLDLQGDPWPRPAFTPADPEKFLALLDELRA 113
BLAST of NO19G00440 vs. NCBI_GenBank
Match: WP_046317318.1 (hypothetical protein [Mycobacterium sp. UM_Kg1]) HSP 1 Score: 73.9 bits (180), Expect = 6.900e-10 Identity = 40/105 (38.10%), Postives = 59/105 (56.19%), Query Frame = 0
Query: 57 YEDGYLKLTPTKLKVKCYFFPFGLAKTIPLKDIKKVSLLPLGSMWQGQYKHWGMAVDFQRWWPSDLRRAGRTHFIEVDC--GSWPRVAFTVNDPENVYLLLSQAM 160
Y+DG + L + ++ Y FP G AK IPL I++ PLG ++ +++ WG + D +RW P D+RR R+ I +D WPR AFT DPE LL + +
Sbjct: 10 YDDGLVALDRRAITLRRYHFPSGTAKVIPLSAIRRYRTEPLG-VFTHRFRIWGSS-DLRRWLPLDVRRPVRSTLITLDLQGDPWPRPAFTPADPEKFLALLDELL 112
BLAST of NO19G00440 vs. NCBI_GenBank
Match: WP_065025126.1 (hypothetical protein [Mycobacterium sinense] >OBK86414.1 hypothetical protein A5648_05650 [Mycobacterium sinense]) HSP 1 Score: 73.9 bits (180), Expect = 6.900e-10 Identity = 40/108 (37.04%), Postives = 61/108 (56.48%), Query Frame = 0
Query: 57 YEDGYLKLTPTKLKVKCYFFPFGLAKTIPLKDIKKVSLLPLGSMWQGQYKHWGMAVDFQRWWPSDLRRAGRTHFIEVDC--GSWPRVAFTVNDPENVYLLLSQAMAVA 163
Y+DG + L + ++ Y FP G +K IPL I+ PLG++ +++ WG + D +RW P D++R R+ I +D WPR AFT DPE +LL + +A A
Sbjct: 5 YDDGLIALDGRAITLRRYHFPSGTSKVIPLSAIRGYRAEPLGALTH-RFRLWGSS-DLRRWLPLDIKRPLRSTLITLDLHDNHWPRPAFTPADPETFRVLLDELLAGA 110
BLAST of NO19G00440 vs. NCBI_GenBank
Match: WP_067775424.1 (MULTISPECIES: hypothetical protein [Mycobacterium] >OBG81036.1 hypothetical protein A5699_09795 [Mycobacterium sp. E802] >OMB93441.1 hypothetical protein A5733_16215 [Mycobacterium sp. NS-7484]) HSP 1 Score: 72.8 bits (177), Expect = 1.500e-9 Identity = 36/108 (33.33%), Postives = 61/108 (56.48%), Query Frame = 0
Query: 53 PLTLYEDGYLKLTPTKLKVKCYFFPFGLAKTIPLKDIKKVSLLPLGSMWQGQYKHWGMAVDFQRWWPSDLRRAGRTHFIEVDC-GSWPRVAFTVNDPENVYLLLSQAM 160
P Y+DG ++L + ++ Y FP G +K IPL+DI+ PLG +W +++ WG + D +RW P D+ R R+ + +D G +P+ AFT P+ + L + +
Sbjct: 4 PRQYYDDGLVQLDREAITLRRYHFPSGTSKVIPLRDIRSFKAEPLG-LWMQRFRLWG-STDLRRWLPLDMHRPLRSILVTLDVPGVYPKPAFTPARPDELIARLDELL 109
BLAST of NO19G00440 vs. NCBI_GenBank
Match: WP_090517016.1 (hypothetical protein [Mycobacterium neworleansense] >CRZ17534.1 hypothetical protein BN2156_04419 [Mycobacterium neworleansense]) HSP 1 Score: 72.0 bits (175), Expect = 2.600e-9 Identity = 37/108 (34.26%), Postives = 60/108 (55.56%), Query Frame = 0
Query: 53 PLTLYEDGYLKLTPTKLKVKCYFFPFGLAKTIPLKDIKKVSLLPLGSMWQGQYKHWGMAVDFQRWWPSDLRRAGRTHFIEVDC-GSWPRVAFTVNDPENVYLLLSQAM 160
P Y+DG ++L + ++ Y FP G +K IPL+DI+ LG +W +++ WG + D +RW P D+ R R+ I +D G++PR AFT P+ L + +
Sbjct: 4 PRQYYDDGLIQLDREAITLRRYHFPSGTSKVIPLRDIRSYKAESLG-LWMQRFRLWG-STDLRRWLPLDVHRPLRSTLITLDVPGTYPRPAFTPARPDEFVASLDELL 109
BLAST of NO19G00440 vs. NCBI_GenBank
Match: WP_044513868.1 (hypothetical protein [Mycobacterium septicum]) HSP 1 Score: 71.2 bits (173), Expect = 4.500e-9 Identity = 36/108 (33.33%), Postives = 61/108 (56.48%), Query Frame = 0
Query: 53 PLTLYEDGYLKLTPTKLKVKCYFFPFGLAKTIPLKDIKKVSLLPLGSMWQGQYKHWGMAVDFQRWWPSDLRRAGRTHFIEVDC-GSWPRVAFTVNDPENVYLLLSQAM 160
P Y+DG ++L + ++ Y FP G +K IPL+DI+ LG +W +++ WG + D +RW P D+ R R+ I +D G++P+ AFT P++ L + +
Sbjct: 4 PRQYYDDGLIQLDREAITLRRYHFPSGTSKVIPLRDIRSYKAESLG-LWMQRFRLWG-STDLRRWLPLDVHRPLRSTLITLDVPGTYPKPAFTPARPDDFVASLDELL 109
BLAST of NO19G00440 vs. NCBI_GenBank
Match: WP_090429878.1 (MULTISPECIES: hypothetical protein [Mycobacterium] >SER06557.1 hypothetical protein SAMN04488583_4165 [Mycobacterium sp. 88mf] >SFF88279.1 hypothetical protein SAMN04488582_104499 [Mycobacterium sp. 455mf]) HSP 1 Score: 70.5 bits (171), Expect = 7.700e-9 Identity = 36/108 (33.33%), Postives = 60/108 (55.56%), Query Frame = 0
Query: 53 PLTLYEDGYLKLTPTKLKVKCYFFPFGLAKTIPLKDIKKVSLLPLGSMWQGQYKHWGMAVDFQRWWPSDLRRAGRTHFIEVDC-GSWPRVAFTVNDPENVYLLLSQAM 160
P Y+DG ++L + ++ Y FP G +K IPL+DI+ LG +W +++ WG + D +RW P D+ R R+ I +D G++P+ AFT P+ L + +
Sbjct: 4 PRQYYDDGLIQLDREAITLRRYHFPSGTSKVIPLRDIRSYRAESLG-LWMQRFRLWG-STDLRRWLPLDVHRPLRSTLITLDVPGTYPKPAFTPARPDEFVASLDELL 109 The following BLAST results are available for this feature:
BLAST of NO19G00440 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO19G00440 ID=NO19G00440|Name=NO19G00440|organism=Nannochloropsis oceanica|type=gene|length=1955bpback to top protein sequence of NO19G00440.1 >NO19G00440.1-protein ID=NO19G00440.1-protein|Name=NO19G00440.1|organism=Nannochloropsis oceanica|type=polypeptide|length=226bpback to top Synonyms
Publications
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