NO19G00430, NO19G00430 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO19G00430 vs. NCBI_GenBank
Match: CBJ48376.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 99.4 bits (246), Expect = 1.300e-17 Identity = 51/121 (42.15%), Postives = 79/121 (65.29%), Query Frame = 0 Query: 7 FDPAKSQVSHEAQLLWLRSPITGDLTEVPGIGPKHAEHLHAKD----IHTTHQLIGEYLKMKGKD-----VDPKMHAQHFYDHIQAYGVSSHRTDVVDAIASKVSMWLPGMYDASAFHHTA 119 +DP +S+VS + ++RS +TGDLTEVPGI + AE L + + T+QLIG++L ++G D VD H F+ +QA G++S+R+ +V+AIA KV+ W+PG+YDA ++ TA Sbjct: 6 YDPKRSKVSDDKLAEFIRSAVTGDLTEVPGIAARGAEILADGEGDDKVTNTYQLIGKFLALRGPDKTDHEVDSVEHCDKFWYWLQAKGINSNRSGIVNAIAEKVNTWIPGIYDADSYTDTA 126
BLAST of NO19G00430 vs. NCBI_GenBank
Match: EJK44675.1 (hypothetical protein THAOC_36769 [Thalassiosira oceanica]) HSP 1 Score: 93.6 bits (231), Expect = 7.200e-16 Identity = 49/117 (41.88%), Postives = 75/117 (64.10%), Query Frame = 0 Query: 7 FDPAKSQVSHEAQLLWLRSPITGDLTEVPGIGP----KHAEHLHAKDIHTTHQLIGEYLKMKGKDVDPKM-----HAQHFYDHIQAYGVSSHRTDVVDAIASKVSMWLPGMYDASAF 115 +DP +S+VS ++ + ++R+ + GD+TEVPGIGP K AE H + I T+QLIG++L +KG D D H + F+ +Q +S+HR+ +V AIA KV+ LPG+YDA + Sbjct: 6 YDPKRSRVSDDSLMDFIRAQVQGDITEVPGIGPAAAKKLAEGEHDECITNTYQLIGKFLMLKGPDTDDNKVESMEHCEKFWYWLQDKQISAHRSAIVKAIAMKVNGLLPGVYDADLY 122
BLAST of NO19G00430 vs. NCBI_GenBank
Match: GAX22368.1 (hypothetical protein FisN_3Hh424 [Fistulifera solaris]) HSP 1 Score: 91.7 bits (226), Expect = 2.800e-15 Identity = 45/114 (39.47%), Postives = 69/114 (60.53%), Query Frame = 0 Query: 7 FDPAKSQVSHEAQLLWLRSPITGDLTEVPGIGPKHAEHLHAKD------IHTTHQLIGEYLKMKGKDVDPKMHAQHFYDHIQAYGVSSHRTDVVDAIASKVSMWLPGMYDASAF 115 +DP +S+V+ + +++ I GDL EVPGIGP + L D I TT+QLIG YL +K + DP H +F+ ++ G+SSHR+ +V IA K + ++PG+YD S + Sbjct: 6 YDPKRSKVNKDKLDEFVQREIKGDLEEVPGIGPAAVKKLAEPDAQGNPGITTTYQLIGAYLSLKNSECDPVSHNDYFWYWLKEKGISSHRSGIVQCIAKKCNSFMPGLYDPSMY 119
BLAST of NO19G00430 vs. NCBI_GenBank
Match: GAX10227.1 (hypothetical protein FisN_3Lh424 [Fistulifera solaris]) HSP 1 Score: 91.7 bits (226), Expect = 2.800e-15 Identity = 45/114 (39.47%), Postives = 69/114 (60.53%), Query Frame = 0 Query: 7 FDPAKSQVSHEAQLLWLRSPITGDLTEVPGIGPKHAEHLHAKD------IHTTHQLIGEYLKMKGKDVDPKMHAQHFYDHIQAYGVSSHRTDVVDAIASKVSMWLPGMYDASAF 115 +DP +S+V+ + +++ I GDL EVPGIGP + L D I TT+QLIG YL +K + DP H +F+ ++ G+SSHR+ +V IA K + ++PG+YD S + Sbjct: 6 YDPKRSKVNKDKLDEFVQRDIKGDLEEVPGIGPAAVKKLAEPDAQGNPGITTTYQLIGAYLSLKNSECDPVSHNDYFWYWLKEKGISSHRSGIVQCIAKKCNSFMPGLYDPSMY 119
BLAST of NO19G00430 vs. NCBI_GenBank
Match: XP_008863888.1 (hypothetical protein H310_02224 [Aphanomyces invadans] >ETW07795.1 hypothetical protein H310_02224 [Aphanomyces invadans]) HSP 1 Score: 90.9 bits (224), Expect = 4.700e-15 Identity = 48/120 (40.00%), Postives = 79/120 (65.83%), Query Frame = 0 Query: 7 FDPAKSQVSHEAQLLWLRSPITGDLTEVPGIGPKHAEHLHAKD-----IHTTHQLIGEYLKMK----GKD--VDPKMHAQHFYDHIQAYGVSSHRTDVVDAIASKVSMWLPGMYDASAFH 116 +DPAKS+++ + +LR+P+TG LTEVPGIGP A++L A D I T QL+G+++ +K G D +D + H F+ +++ G++S+R+ +V AIA K++ +PG+YDA F+ Sbjct: 6 YDPAKSRIADDTLADFLRAPLTGVLTEVPGIGPAAAKNLAAGDDPADQITNTFQLMGKFMLLKRNEDGSDEPIDCRTHCDAFWHWLKSKGITSYRSGIVMAIAEKMNTMIPGVYDACDFN 125
BLAST of NO19G00430 vs. NCBI_GenBank
Match: XP_005854378.1 (hypothetical protein NGA_0223210 [Nannochloropsis gaditana CCMP526] >EKU21984.1 hypothetical protein NGA_0223210 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 90.5 bits (223), Expect = 6.100e-15 Identity = 42/70 (60.00%), Postives = 53/70 (75.71%), Query Frame = 0 Query: 63 MKGKDVDPKMHAQHFYDHIQAYGVSSHRTDVVDAIASKVSMWLPGMYDASAFHHTAGPTTEGKNEHELIA 133 MKGK+VDPK HAQ FY+HIQ YG+ SHR+ +VDAIASKVSMW+PGMYD+ A+ + E KN + +A Sbjct: 1 MKGKNVDPKDHAQRFYEHIQEYGLDSHRSGIVDAIASKVSMWVPGMYDSGAY--ASSGAAESKNVVDPVA 68
BLAST of NO19G00430 vs. NCBI_GenBank
Match: OQR93017.1 (hypothetical protein ACHHYP_03012 [Achlya hypogyna]) HSP 1 Score: 90.5 bits (223), Expect = 6.100e-15 Identity = 49/120 (40.83%), Postives = 74/120 (61.67%), Query Frame = 0 Query: 7 FDPAKSQVSHEAQLLWLRSPITGDLTEVPGIGPKHAEHLHAKD-----IHTTHQLIGEYLKMKGKD------VDPKMHAQHFYDHIQAYGVSSHRTDVVDAIASKVSMWLPGMYDASAFH 116 ++P KS+++ + +LR+P+TG LTEVPGIGP A+ L D + T QLIG++L +K D +D H F+ ++A GVSS+R+ +V AIA KV+ +PG+YDA F+ Sbjct: 6 YNPEKSRIAEDTLADFLRAPLTGVLTEVPGIGPAAAKKLAGGDDVADQVTNTFQLIGKFLMLKRNDDETDEPIDCPTHCDAFWHWLKAKGVSSYRSGIVMAIAEKVNTMVPGVYDACDFN 125
BLAST of NO19G00430 vs. NCBI_GenBank
Match: XP_008607465.1 (hypothetical protein SDRG_03606 [Saprolegnia diclina VS20] >EQC39404.1 hypothetical protein SDRG_03606 [Saprolegnia diclina VS20]) HSP 1 Score: 90.1 bits (222), Expect = 8.000e-15 Identity = 48/120 (40.00%), Postives = 75/120 (62.50%), Query Frame = 0 Query: 7 FDPAKSQVSHEAQLLWLRSPITGDLTEVPGIGPKHAEHLHAKD-----IHTTHQLIGEYLKMKGKD------VDPKMHAQHFYDHIQAYGVSSHRTDVVDAIASKVSMWLPGMYDASAFH 116 ++P KS+++ + +LR+P+TG LTEVPGIGP A+ L D + T QLIG++L++K D +D H F+ +++ GVSS+R+ +V AIA KV+ +PG+YDA F+ Sbjct: 6 YNPEKSRIAEDTLADFLRAPLTGVLTEVPGIGPAAAKKLAGGDDVADQVTNTFQLIGKFLQLKRNDDETDEPIDCPTHCDAFWHWLKSKGVSSYRSGIVMAIAEKVNTMVPGVYDACDFN 125
BLAST of NO19G00430 vs. NCBI_GenBank
Match: XP_009824534.1 (hypothetical protein H257_02548 [Aphanomyces astaci] >ETV86062.1 hypothetical protein H257_02548 [Aphanomyces astaci]) HSP 1 Score: 89.7 bits (221), Expect = 1.000e-14 Identity = 46/120 (38.33%), Postives = 77/120 (64.17%), Query Frame = 0 Query: 7 FDPAKSQVSHEAQLLWLRSPITGDLTEVPGIGPKHAEHL-----HAKDIHTTHQLIGEYLKMKGKD------VDPKMHAQHFYDHIQAYGVSSHRTDVVDAIASKVSMWLPGMYDASAFH 116 +DPAKS+++ + +LR+P+TG LTEVPGIGP A++L A I T QL+G+++ +K + +D + H F+ +++ G+SS+R+ +V AIA K++ +PG+YDA F+ Sbjct: 6 YDPAKSRIADDTLADFLRAPLTGVLTEVPGIGPAAAKNLAKGDDPADQITNTFQLMGKFMLLKRNEDDTDEPIDCRTHCDAFWHWLKSKGISSYRSGIVMAIAEKMNTMIPGVYDACDFN 125
BLAST of NO19G00430 vs. NCBI_GenBank
Match: XP_012193793.1 (hypothetical protein SPRG_00301 [Saprolegnia parasitica CBS 223.65] >KDO35453.1 hypothetical protein SPRG_00301 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 89.7 bits (221), Expect = 1.000e-14 Identity = 48/120 (40.00%), Postives = 74/120 (61.67%), Query Frame = 0 Query: 7 FDPAKSQVSHEAQLLWLRSPITGDLTEVPGIGPKHAEHLHAKD-----IHTTHQLIGEYLKMKGKD------VDPKMHAQHFYDHIQAYGVSSHRTDVVDAIASKVSMWLPGMYDASAFH 116 ++P KS+++ + +LR+P+TG LTEVPGIGP A+ L D + T QLIG++L +K D +D H F+ +++ GVSS+R+ +V AIA KV+ +PG+YDA F+ Sbjct: 6 YNPEKSRIAEDTLADFLRAPLTGVLTEVPGIGPAAAKKLAGGDDVADQVTNTFQLIGKFLSLKRNDDETDEPIDCPTHCDAFWHWLKSKGVSSYRSGIVMAIAEKVNTMVPGVYDACDFN 125 The following BLAST results are available for this feature:
BLAST of NO19G00430 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO19G00430 ID=NO19G00430|Name=NO19G00430|organism=Nannochloropsis oceanica|type=gene|length=1839bpback to top protein sequence of NO19G00430.1 >NO19G00430.1-protein ID=NO19G00430.1-protein|Name=NO19G00430.1|organism=Nannochloropsis oceanica|type=polypeptide|length=193bpback to top Synonyms
Publications
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