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Properties
| Property Name | Value |
|---|
| Description | Unknown protein |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| chr19 | genome | chr19:159346..162619 - |
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
| GO:0016020 | membrane |
Homology
BLAST of NO19G00410 vs. NCBI_GenBank
Match: EWM23544.1 (hypothetical protein Naga_100339g2 [Nannochloropsis gaditana]) HSP 1 Score: 154.5 bits (389), Expect = 9.500e-34 Identity = 96/190 (50.53%), Postives = 110/190 (57.89%), Query Frame = 0
Query: 39 AFTPLRQVSPSTFLPLPSXXXXXXXXXXXXXXXXXPLPHQI----------RRDTSLYGLFGGKAAPAPEPPAKTGLFSGLLGKKTTSAASATTGPDGRKRRLVRKKVKAASSTREARKDVKXXXXXXXXXXXN-MQRSTLQRDNSWDVIEKERVPLSSIVIGVGSAAAVGGYFFKRRWALRNEQLVNDF 218
+FTPLR S TFLP P PH + RR++ LYGLF KA P+ EPP K LF+ LLG T +AT GRKR+LVRKKVK ASSTR + K +K QRSTLQRDNSWDVIEK+RVPLSS+ IGVG AAVGGYF KR WA RNE+L+ DF
Sbjct: 66 SFTPLRPPSTPTFLP------------SSPIPHFCPSPHPLHLSPAASGPSRRESRLYGLFNNKATPSSEPPPKPSLFNRLLG--TPRTRTATEKGSGRKRKLVRKKVK-ASSTRASSKPIKQDAAGARPGERRATQRSTLQRDNSWDVIEKQRVPLSSVAIGVGGVAAVGGYFLKRHWAQRNERLITDF 240
BLAST of NO19G00410 vs. NCBI_GenBank
Match: EWM23528.1 (hypothetical protein Naga_103433g1, partial [Nannochloropsis gaditana]) HSP 1 Score: 86.3 bits (212), Expect = 3.200e-13 Identity = 41/45 (91.11%), Postives = 43/45 (95.56%), Query Frame = 0
Query: 222 MGAGMDTSELYRIAMSYKAKLGPFATPRILNEYLKAVFRAPDLSS 267
MGAGM+T ELYRIA+SYK KLGPFATPRILNEYLKAVFRAPDLSS
Sbjct: 1 MGAGMNTQELYRIAISYKTKLGPFATPRILNEYLKAVFRAPDLSS 45
The following BLAST results are available for this feature:
Relationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO19G00410 ID=NO19G00410|Name=NO19G00410|organism=Nannochloropsis oceanica|type=gene|length=3274bp
CGCGCTTCAACCTTGATATGTTTATGGCACTGCCAGCCGCAGGCTAGCTA
TCCTTTCGCCTGTGCTGCAACTTGCCGTACTTCTTGTTTCGGTGGACAGT
CGGGTCTTAAGCAGAGCATGTCATGGCAATCCAAGCATTGCATCTGTCTG
GAGTCTTCTCTCACGCGCTGCGGCAAGGCACCTGATACTTGTCACCCGCT
CATTCATCTCATCCACATCCACCACCTGACCATAAGACGACGTACACCCA
CCCCATCCCGATACCCACCCACAGGAGGAGCCCCTGCATCCGAGGATCCG
TTGCTCCTGTAGCCTTGTGTTGTTGTGGAGCACAGGCATCTCAGGATGAC
GACGACCAGCACTACTCCTAACTGTAGCAGCCACAGCCGCAGCCGCAGAC
TCCTCCCCTCCCTCCTGCTAGTGCTGTTGCTCGCCTCCTCCTCCCTTCTC
CTGATCGAAGCCTTTACACCCTTAAGACAAGTCTCCCCCTCCACTTTTCT
TCCATTGCCTTCCCCCTCTTCCGCCGCATCCCCCTCCTCTTTCTGCCCCT
TCCCTCGCCAGTCACCACTACCACACCAAATAAGAAGAGACACCTCCCTC
TATGGTCTCTTCGGGGGGAAGGCAGCCCCGGCACCAGAACCCCCTGCCAA
GACCGGCTTGTTCAGTGGGTTGCTAGGGAAGAAGACGACAAGCGCGGCGT
CAGCAACCACGGGGCCCGATGGCCGCAAGAGGAGATTGGTCCGGAAGAAG
GTCAAGGCCGCGTCATCCACACGCGAGGCCCGGAAGGACGTGAAGAAGAA
GGACACCAAGACGGAAGGGAAGAAGGCGAATATGCAACGGTCGACGCTGC
AGAGGGATAACTCGgtacgtacgtgcttgggatggggatggataaaaggg
gggcgggaggggggggcgacggcccttctcttgcttgcttcctccctttt
gtccttcttaccttccctccctccctccccccctcctccctccctccctc
cctccccgtctgcctttacagTGGGACGTCATCGAGAAGGAGCGCGTTCC
TCTTTCCTCAATTGTCATCGGCGTGGGGTCAGCCGCGGCTGTGGGTGGAT
ACTTTTTTAAGCGACGCTGGGCCTTGCGGAACGAGCAGTTAGTCAATGAC
TTCGTTGATGACATGgtaagtcctccctctccccctcctttcctctttcc
atctttccctccctgaacctatccatcccctcctctctctcttcttcttc
aatgaataatgtgcaaagcgtcaatatcacaccctccatccctcgccctc
ccttcctcagATGGGCGCAGGTATGGACACCAGCGAGCTCTACCGCATAG
CCATGTCGTACAAAGCCAAACTGGGTCCGTTTGCTACCCCTCGCATCCTC
AATGAGTACCTGAAGGCCGTGTTTCGCGCCCCCGACTTGTCATCTAGTgt
acgtcatccgcccgccctcccgccctccctccctccctccctttttcctt
ccttttttctttgtcaattgttctcatcctccctcgccaccccctcactc
cctccctccccccgtcccttttagTTCGTGGAGGCCATGGATTTGGTGGT
CAATCAGCTGTTAAAAGTGAAGGATCAGGAGCTAGTCGACGCCATTGCCG
AGATCGCACGTGAGgtagtgagggaggaaggaatggggggaaagcatgaa
gaaaaggaggaggatgaagtgggagatcgtgggggtgcatgacaaaggaa
aagaagggaggaagatgggccgaagggagggagggagggagggagggagg
gagggagggaggaagggaggacggcctgactcgtttcttggccctgacac
gtatttggacattttccctccctccctccattcctccctccctccctcca
gATGGCCAAGGGACAGGAATTTGTCGGCATGTCCATCCTCCTCTTCACCT
TCGAGCGCATCCTACCCCCCGCACTGTCGGAGACGCAGCTCGAGCCCCTT
CGCCGCGCCCTCGGGAAGGCCCTCCCTGGGAACGTGGAAGACAACATGTT
TGAGCTTGCCAAGGACGCCTATTCCCTCGgtacgccctccctccctccct
ccctccctcccatttccgactccctgctccttgatgtccctctctgagcg
cccctccctccctccctcccctcctccctccctccctccttggcacagAG
GTGGAGTCCCTCTTCATTCGTGGAGAGAACCCGGTGCTGGCCCCCGAGGG
TTATGAGGTGATGGGTCTGCCTTTCGATGAGGCCGAAAAAGTCTTTAAGC
GCGTCAAGAGAAGCTACGAAGGGAATGgtgcgtccctccctcccttcctc
ttttcctccctcccgccctccctccctccctgcgactcctcctctccctg
cgagacacccccctctcctcctccctcctcacctccctgacttccctccc
tccctccctctctctttccagACGCACAGCATGACGGCGGGACGGAGGGT
GGGGAAGACTTGGGGGCGAGTCTGATCGTGCGACGGAAGGAGCCGTTGCA
TGACATGATCTACGGCAAGGCCGAGGATATTGCAGgtgagcacgccctcc
ctccctccctcataatccctccctcccttcctccctctcttcctccctcc
ctctcttcttttcttggactcgcctgccaggaaactgaccccttggcttg
tcgtcctccctccctccctccctccctccctccctccctccctccctcct
tccctccctccctgttcctcctcagACAAGTACATCGTGGGGTACAAGGA
GGAAAAAGACAGGAAAAAGGCAGCGAAACTCCGCGGAAACCGTCCACCCT
CGTGGGACGAAACGGTCGAGCGTATCTCCGAGATGGTGCTGACCAAGGAG
GGAGAGCAAGTCATCGAGgtgaggagtcctgccctaccctccctccctcc
ttcttttcttcctatcctctcactgattctccacacacctcctgccatcc
ccccttcctccatccctcccaaccctccctccctccttccgccatacctt
gttttcactgatttctttctcacccctccttccctccctccctccctccc
tccctcctccagTCTCTCCAAAAATTCCAATGTTTGCGATGCCAGCGTCT
CACCACCCTCATGCCCGGACAGTTGGAAGAGGATATCTTTACGCCCGACT
ACAAATGTCCGCAGTGTAAGAGCACCCGGGACATGGTGGTGAGGAAGAGC
TAGAGGGAGGGAGGGAGGGAGGGA back to topprotein sequence of NO19G00410.1 >NO19G00410.1-protein ID=NO19G00410.1-protein|Name=NO19G00410.1|organism=Nannochloropsis oceanica|type=polypeptide|length=532bp
MTTTSTTPNCSSHSRSRRLLPSLLLVLLLASSSLLLIEAFTPLRQVSPST
FLPLPSPSSAASPSSFCPFPRQSPLPHQIRRDTSLYGLFGGKAAPAPEPP
AKTGLFSGLLGKKTTSAASATTGPDGRKRRLVRKKVKAASSTREARKDVK
KKDTKTEGKKANMQRSTLQRDNSWDVIEKERVPLSSIVIGVGSAAAVGGY
FFKRRWALRNEQLVNDFVDDMMGAGMDTSELYRIAMSYKAKLGPFATPRI
LNEYLKAVFRAPDLSSSFVEAMDLVVNQLLKVKDQELVDAIAEIAREMAK
GQEFVGMSILLFTFERILPPALSETQLEPLRRALGKALPGNVEDNMFELA
KDAYSLEVESLFIRGENPVLAPEGYEVMGLPFDEAEKVFKRVKRSYEGND
AQHDGGTEGGEDLGASLIVRRKEPLHDMIYGKAEDIADKYIVGYKEEKDR
KKAAKLRGNRPPSWDETVERISEMVLTKEGEQVIESLQKFQCLRCQRLTT
LMPGQLEEDIFTPDYKCPQCKSTRDMVVRKS* back to top
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