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Properties
| Property Name | Value |
|---|
| Description | Unknown protein |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| chr19 | genome | chr19:85368..91488 + |
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0046522 | S-methyl-5-thioribose kinase activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0009086 | methionine biosynthetic process |
Homology
BLAST of NO19G00220 vs. NCBI_GenBank
Match: EWM23510.1 (hypothetical protein Naga_102246g1 [Nannochloropsis gaditana]) HSP 1 Score: 135.6 bits (340), Expect = 5.900e-28 Identity = 77/135 (57.04%), Postives = 81/135 (60.00%), Query Frame = 0
Query: 427 MSGPAGLDLGQFSANYVWYIATFAVGADRRETVTIMEKALLGAWTTFINEFRQALNKRXXXXXXXXXXXRGLFPLLPPFLRRGKDEGGREGIEWDTEGALQSILLEAQGFLGMWLLFLTIACPVELMEIWPPSAR 562
MSGPAGLDLGQ SANYV RETVT MEKALL WTT+ NEFRQ+ NKR R P L RR L+SILLEAQGFLGMWLLFLTIACPVE+MEIWPPSAR
Sbjct: 1 MSGPAGLDLGQLSANYVC-----------RETVTTMEKALLAIWTTYTNEFRQSYNKR-----IKEEAQRAPLPFLSSLFRRKGRXXXXXXXXXXXXXXLRSILLEAQGFLGMWLLFLTIACPVEIMEIWPPSAR 119
BLAST of NO19G00220 vs. NCBI_GenBank
Match: WP_013456997.1 (S-methyl-5-thioribose kinase [Oceanithermus profundus] >ADR35827.1 5-methylthioribose kinase [Oceanithermus profundus DSM 14977]) HSP 1 Score: 66.2 bits (160), Expect = 4.400e-7 Identity = 80/324 (24.69%), Postives = 123/324 (37.96%), Query Frame = 0
Query: 161 HSVFVKHAKDFVRGFTEFAPLSRDRVWYEAEGIKELSKYLPGGFPQVYLVDRAEGLFVCEWLEAYSSLADSLAQGDVVSRTIAPSLARMIARYTAASYHPTVDPPPYYGKEVGGEEGR---EEWMEGNSGKKWDSPLPSSGKQHQXXXXXXXXXXXXXXXXXPHASTHPNQGHIDFWSKCVFPXXXXXXXXXXXXXXXXXXXXXXXLTKPHLFPLLEALNREGDLQRAVCRLWGSYRERKESLVHADLHCKNILVRSTLSLKVVDCEKYMSGPAGLDLGQFSAN----YVWYIATFAVGADRRETVTIMEKALLGAWTTFINEF 478
H++ VK A ++R E PL+RDRV YE E +K +KY PG PQVY D + E L + + L V R P+ A IA + A + T D Y K GEE + E +M + K + + ++ P + N W+ P L L++ + R+G+L+ V L Y +SL+HADLH +I++ +V+D E GPAG D+ N Y + A +R + + + + W F +F
Sbjct: 55 HTLVVKQALPYLRVVGEDWPLTRDRVIYETEALKLHNKYAPGLAPQVYDHDYEMSTLMMENLNRHEIMRKPL-----VRRVKFPNFAEDIATFLANTLFHTSD---LYLK---GEEKKALVERFMNPHLRKLQEDFVYTN----------------------PFKESPENN-----WN-------------------------------PLLDDLVQEVRRDGELKERVAWLKEGYMNHAQSLIHADLHTGSIMINQE-ETRVIDPEFAFVGPAGYDVAAVLQNLMLSYASHYAHTPDPEERADYQAWLMETMKQIWERFAQKF 308
The following BLAST results are available for this feature:
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO19G00220 ID=NO19G00220|Name=NO19G00220|organism=Nannochloropsis oceanica|type=gene|length=6121bp
GCTGATCTCTGCTGTTTGAGCTGTGCATGTTTGTCGGGGAAAACATCAAC
CAAGGGGGCGGGGAGGTTGTAGGAAACAAGGCAGACGAGGTAAAGTGCAG
GCGGCACTTGTGTACGTAGCCGGGACAAAGAAGGAGGATTCCAGCAGCTC
AAGCATGCACCCAAAAAGAAAAGTGGAGCACGCACAGGAAAAAACAGTCA
TTGGTGAACTGAGAGGCGAGAGTCCACGTTGTCTCTTGAACGCATGTGCT
GGTAGGATACTTCTACCCGCAGGAACAGCTCTCGGCGACTGTGTGCAGTT
GCAAACAGATCTTGTTATGATACCCAAACTCTTGCGAATGTACCAATATC
AGTATACATCTGAACATGGCGAAAATCACGTGGACTTGGCTTTCTGTCTG
GGCGTGCTAAAACCTTTGCGCTAAAAGGTTTGTCCATAAGGGAAGGGACA
GCAGGTGGTTGATGTTGTCCGGTTGATGGGGCTTCAACGAGCCGATAACA
CCCCCACTTCCCGACCTTGTCCTGTAGGAACATAGTCTGGCCATAGTGCA
AGGGGCCAAAACCCTCAAAACACGACAACACACTTGGCAGTATTTGATCT
TGTCCATTACGTCTACTTCAGCTTGAATTGAATGGGTGTTCGATTGGCAC
AGCCCACAAAGTGCGAATCGACCCCTGATGTCATTTCTGGCACAGCAGTC
ATTCTGTTCTGGATGAGCAGTATCGGAAACTTAAAGACTTTTCGGGGCCC
TCGCCCTGCGCCCGACCCGATGTGGCTGAATCCTTGCATCACAAAGTGAG
AAATTGATTCTCCCATGTCATAAACTTTCGAGGTCTCCCTTCAAATACTT
CCCATATCTCAAGGGCGTACACGCACACCCATCGAGTTGGTACCCTACTC
TACGTTAAATACAAACATAAAAAGAAAACCCCCATAAAGAGGACATAATG
TGCCAAAAATATAATGGCTGCATTTCCATTAGGCATGCAAAATATTTTTC
CCTTGTGGCAATGACCTAAATGTGGCGTGCGTGCATTCTCCCTCAATATT
ACCATCTCCCAAAACTTGGCAGCATGACCCCCTGCCCAAGACATACTACC
ACAATAATTGCACATATATGATGAGCATGATAATTGCACATATATGACAT
ATATGGTGATTACTTACTCATTAATCTTCCTGTCCTTCATCTCCGTCCTT
CCTCTTCCAGAAAAGTACAAAGTCCGATCATCCTCTCCGTTTCCATTCCA
CTTTTCCCCCGTTTTCTTCGAAGACACTCCTCACAGGAATCAAAGGGAGA
ACATGAACCAGGCTGGTCGCTTACGTCCCTCATCAAACTCCATAGTGATC
AATTCTGCCAACCTTTCACCCCCTCCTTTCCTCCCGGTCCTCCCTACCCT
ACCTTTACTTCTGGGGAGGAGACTACCATGCGACGTTTCCCCGCGGGAGG
ACAATCGCAGAAAAGGATGGGGCAGGTACGCGGGCCGTTGGGGCAAATGG
ATGTACTTACAGGGACGAAGGGGGGGAAGTCCTGGGAGGAGGGAGGATGG
AGGGAAAGATGTGAGACTCGCAGAAGAGAGTGAGATACGGTTCCATAAGT
AGACCAGCCTTATTTAAATTATTACTGTAACGCATGAAGACCCTCCCCCG
ACTGTAGAATAAATAGCAACTTACTATATATAGTTTCCTTTTCGCCTTCT
TATGGAATTTATCAACTGAGTGTATAAATTTCCATTTTGAAAGGGTCCTC
AGAGGTTGGCCTGTATGATATTTCCCTTCTCAAAAATTAAAACCAAAGCG
ACAAACTTTATAAAAGTGTAAAGGCATGACTTCTTTTCGATATTTTATTC
CTGTCGAGAGTGGAATGTGTATGTCAGAGCTACACAAGCCTCAAAATATT
TCAAGCACATAAGAGCTAATCACCCCTCCTGGGGGGGGGGTGGATGCTCT
GCACGGTACAGCGCTGGCCTGCTTCGCCATGCGCCATAAAAAAGACAAGG
AAAGACTTGCTTGACGACATTCCAGGCTCCAACCGTCCACAGTCTACCTC
GCTAGGAACACAAGTAGTTATAAAAAGAAAGTGAAGGACGCTGGCTTTCA
TTTCATAATGCATCATTGTCCTAATCATCCTTCAAATAATAGAAAAAGGA
TCAAAGGTTATATACTATGGTTTTACCCGGTCTGAGAACCCAACGGTTTG
AGCCTGCCAAATCGCGCATTTTACCCCTTGTCGAGCAAATAGCCCCTTAA
TTATATCTGTTCGATGCGCGCATGAACGTTAGCTATGCCTTCAGTTTACG
CAGCTACGGACATGGGCAGGAACTCAGCTGCGGTGAGAATACGGAGCCGA
GCAAGAGTCGTCGTGTGAGGAGTTGAGTAGTGTGGTGATGCGTCGCTGAA
GCACGCACATGGTCATGACGTAACACCTCATCCCCCGCCCTTTCCTCTCT
CCCTCCCCCTGGACCATCTAGATGGCGTCGCAATGCCGATGGCATGGCCA
TAGCCTGCTCCTACTCCTTCTCCTGCCGCTCGTTGCGCTGGCATTTCTCG
ATCTGCCGCTGCCGCTCCGTCCTAGCTTGATGGCAATAAGCAGGAGTAGC
AGCAGCAGCAGCAGCCACCTAGGCAGGCCAAGCGTGGCTCGACTGTTGCG
GCAATATAGTGGAAGGTGTAGCAATCAAATTTGCAGGGCCACAAGTACGC
AGgttggtctatggataaggtgggagatcaaatgaagccatctgatgcct
ccctcccctccctctccctcccccgagcacaaccattattaccaccgcca
gcagcagcatgaacagcataagaagaggaaacaaaagaaaatctttaatc
attgcagtgaagggaaacgtaactcgtgatactaatcgcgcttcgacagt
cctcttacgccaccattcccgtccctcctcctctccctcctctttctcct
tcagGCACCGCCACCACCACCACCACCACTAGAGGATGAGATAGAAGATC
CTCATTCGATTGCGGCGGTCAAGCGGCAAGTCCTCCGGTATGTTGATGCC
AAGCGCCGCCGCCAGAGCACCGATGAAGAGGAGGGGGTGTGCGAGATGAC
CCGCGTGTTGGGGCGAGAGGGCGAGCTAGGCATCCAGTGGATGCCAGGGG
GGAGCACCAACTACAAgtgcgtgggtagggagaggaggagggactggggg
agggaaagagggaaggaaggagggaaatgtgcctcctcaataagctcact
cgccgttcttttccctttttctcccagCTTCCGCCTCTACAACAAGCGCC
TTGGGGCGGAGAAACACTCAGTCTTCGTCAAGCACGCCAAGGATTTCGTC
CGCGGCTTTACAGAATTCGCGCCATTGAGCAGGGACAGGGTGTGGTATGA
GGCAGAAGGAATCAAGGAGCTCTCCAAGgtacgcctcaactcccctcttc
cttcccatccttcctccttcccaccttccctccaaccttccctgcctccc
tctctcttttctccactcgcacacagcggtggaacaaaatatcccaagct
gtagtcattcataattttcctctcctccttcgttcctcactccatccctg
cctccctccctcagTACCTCCCCGGTGGGTTTCCTCAGGTCTATCTTGTG
GACCGAGCTGAAGGTCTCTTCGTCTGCGAGTGGCTCGAGgtgagggaggg
agggagaaagggagggaaagaggaagcaagggagcgaggaggcgaagtga
atctgcttggttccttttctctttttcctgcaatcaacccgcctgacctc
atcaatctcaacccctccctccttccctccctccctccctccctccctcc
ctccctccctccctccctccctccccccccagGCCTACAGCTCACTGGCG
GACTCTCTCGCCCAAGGGGACGTCGTGTCGCGGACCATTGCCCCCTCCCT
CGCGCGGATGATTGCACGCTACACAGCCGCTTCCTACCACCCTACCGTTG
ACCCGCCTCCGTACTACGGGAAGGAGGTCGGGGGGGAGGAAGGGAGGGAG
GAATGGATGGAAGGGAACAGCGGCAAGAAGTGGGATTCTCCCCTCCCCTC
CTCCGGAAAGCAGCACCAGCAAAACGAGGATATTACGACTGCTGCTGCAA
GAACAGCAGCAGCAGCAGCACCTCACGCGTCCACCCACCCCAATCAAGGC
CATATCGACTTTTGGAGCAAATGCGTCTTCCCCCCCCTCCTCGCCGCCCT
CCCTTCCTCGTCCTCTTCCTCTTCCTCCCTCCCGCCCTCTCCCCCTCCCT
CCCTGACCAAGCCCCACCTATTCCCGCTCTTGGAAGCGCTGAATAGAGAG
GGAGACCTCCAACGGGCCGTTTGCCGTTTGTGGGGCAGTTACAGGGAGAG
GAAAGAGTCCCTTGTCCACGCTGACCTGCACTGCAAGAACATCCTAgtac
gtcccctcatcctgcctccttccctctctccttcccttcctccttccctc
tccttgttactacggacattggagtgcttgtctcccaccactcctctttt
tttccctccctccctccccccccctcagGTCCGCTCCACCCTCTCCCTCA
AGGTGGTAGACTGCGAGAAGTACATGAGTGGCCCCGCGGGCCTCGACCTG
GGACAATTTTCCGCGAACTACGTGTGGTATATCGCTACTTTCGCCGTGGG
CGCTGACCGgtacgccacctcgtcctccctcgcttcctcccttcctccct
ccttccctccttttctccgtccctctttccttccgttcggtacccttggc
ttgtattttatattaaaatatataatatattatatatattttcttatata
ttgtcctccccttcttcctcccccccccctctctctccctttctccttcc
ctccctcccttcttccctctctccctccctccatccccagCCGCGAAACC
GTCACCATCATGGAGAAGGCTCTTCTCGGCGCCTGGACTACCTTCATTAA
CGAATTTAGACAAGCACTCAACAAGCGCAAAAAGGATGAAGCAGCAGCAG
CTGCAGCAGCAAGAGGACTCTTCCCTTTACTCCCGCCCTTCCTCCGACGG
GGAAAAGACGAGGGAGGGAGGGAGGGAATAGAATGGGACACCGAGGGGGC
ACTGCAGTCGATCCTGTTGGAGGCGCAGGGGTTTCTCGGGATGTGGCTGT
TGTTCCTCACTATCGCCTGCCCAGTGGAGCTCATGGAGATATGGCCTCCC
TCGGCGCGAGgtgagaagggagggagggagggagggaaggtgctttcttc
ttcccgacgtgcatgtcaacccacaccctcctctcccgcctcctcctccc
cctcccccctccagATACCTGCCAGCGTGTCGACAAGGAGGGCTACATCC
AAGCCGCGCAAACCAATCTCGTCTGCGTGGCTGCCGCCCTCCTGGTCGAC
TACTACCGGGGCCTTCCTCCCTCCTCTCCTCCAGCGGCTGCAGCAAATGA
GGAGGAGGACGAGGAGGGAGGGAAGGAGGCAGCACTTCGCGCCATGGCCC
TGGACCAGGACGGGAGGGAGGGAGGGAGGGAGGTATCGTGGTCGTCGCTC
ATTGAGACCTACCCCCTGCTGTCCCGGGAAGATCCTCGCCGCCTGTTGGG
TTTAATCCGCGAAGGGATCTACTACTCCCCGGCCATGGACGAACAAGCAG
CCACCGCAGGGGTTTGCTAGGCATCCCCTTCCCATCCCTCCCTCCCTCCC
TTCTCTGATCGCCTTTTATTCCGCCCTCCTTCTTTTCCTCTTCCCCCCCC
TTACTCCCATCCTCCTCCTGGCGAAAAAAGAGACTTTTGGGCAAATAGGG
TGTCCTTCCTCCCTTCCTCCTACCTTCCTTCCCTTCTTTCCCTCCCTTCC
TCCTTCCCTCCCCTCCTCATTTTGGTGAGTCTAATCCAGTCTCCTCCCCC
CCTTGAGGATTTTTTTGTTTTATGTGTACATACGAGGAGGAGGAGGGTGT
CGACGATGTGAATCTGCGAGGAGGAGGGGAGAGAGAGGGAAGGACGGAAG
GACACTAGGGGAACGATGGGGGCGACAGATTTATATTGAGGGAGGGAGGG
AGGGAGGGAGAAAAACAAAAG back to topprotein sequence of NO19G00220.1 >NO19G00220.1-protein ID=NO19G00220.1-protein|Name=NO19G00220.1|organism=Nannochloropsis oceanica|type=polypeptide|length=680bp
MASQCRWHGHSLLLLLLLPLVALAFLDLPLPLRPSLMAISRSSSSSSSHL
GRPSVARLLRQYSGRCSNQICRATSTQAPPPPPPPLEDEIEDPHSIAAVK
RQVLRYVDAKRRRQSTDEEEGVCEMTRVLGREGELGIQWMPGGSTNYNFR
LYNKRLGAEKHSVFVKHAKDFVRGFTEFAPLSRDRVWYEAEGIKELSKYL
PGGFPQVYLVDRAEGLFVCEWLEAYSSLADSLAQGDVVSRTIAPSLARMI
ARYTAASYHPTVDPPPYYGKEVGGEEGREEWMEGNSGKKWDSPLPSSGKQ
HQQNEDITTAAARTAAAAAPHASTHPNQGHIDFWSKCVFPPLLAALPSSS
SSSSSLPPSPPPSLTKPHLFPLLEALNREGDLQRAVCRLWGSYRERKESL
VHADLHCKNILVRSTLSLKVVDCEKYMSGPAGLDLGQFSANYVWYIATFA
VGADRRETVTIMEKALLGAWTTFINEFRQALNKRKKDEAAAAAAARGLFP
LLPPFLRRGKDEGGREGIEWDTEGALQSILLEAQGFLGMWLLFLTIACPV
ELMEIWPPSARDTCQRVDKEGYIQAAQTNLVCVAAALLVDYYRGLPPSSP
PAAAANEEEDEEGGKEAALRAMALDQDGREGGREVSWSSLIETYPLLSRE
DPRRLLGLIREGIYYSPAMDEQAATAGVC* back to top
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