jgi.p|Nanoce1779_2|674185, gene_9768 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|674185
Unique Namegene_9768
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_37:162341..166798 -

Link to JBrowse

Properties
Property NameValue
TranscriptId674271
ProteinId674185
Product nameProtein kinase-like domain-containing protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_37supercontigscaffold_37:162341..166798 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0046522S-methyl-5-thioribose kinase activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL055ncniL055Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO19G00220NO19G00220Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|674185mRNA_9768-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|674185mRNA_9768Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|674185

>mRNA_9768-protein ID=mRNA_9768-protein|Name=jgi.p|Nanoce1779_2|674185|organism=Nannochloropsis oceanica|type=polypeptide|length=577bp
MASQCRWHGHSLLLLLLLPLVALAFLDLPLPLRPSLMAISRSSSSSSSHL
GRPSVARLLRQYSGRCSNQICRATSTQAPPPPPPPLEDEIEDPHSIAAVK
RHVLRYVDAKRRRQSTDEEEGVCEMTRVLGREGELGIQWMPGGSTNYNFR
LYNKRLGAEKHSVFVKHAKDFVRGFTEFAPLSRDRVWYEAEGIKELSKVY
LVDRAEGLFVCEWLEAYSSLADSLAQGDVVSRTIAPSLARMIARYTAASY
HPTVDPPPYYGKEPHLFPLLEALNREGDLQRAVCRLWGSYRERKESLVHA
DLHCKNILVRSTLSLKVVDCEKYMSGPAGLDLGQFSANYVWYIATFAVGA
DRRETVTIMEKALLGAWTTFINEFRQALNKRKKDEAAAAAAARGLFPLLP
PFLRRGKDEGGREGIEWDTEGALQSILLEAQGFLGMWLLFLTIACPVELM
EIWPPSARDTCQRVDKEGYIQAAQTNLVCVAAALLVDYYRGLPPSSPPAA
AANEEEDEEGGKEAALRAMALDQDGREGGREVSWSSLIETYPLLSREDPR
RLLGLIREGIYYSPAMDEQAATAGVC*
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Synonyms
Publications