NO19G00200, NO19G00200 (gene) Nannochloropsis oceanica

Overview
NameNO19G00200
Unique NameNO19G00200
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4144
Alignment locationchr19:76495..80638 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr19genomechr19:76495..80638 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006367transcription initiation from RNA polymerase II promoter
GO:0006367transcription initiation from RNA polymerase II promoter
Vocabulary: INTERPRO
TermDefinition
IPR003166TFIIE_bsu_DNA-bd
Vocabulary: Cellular Component
TermDefinition
GO:0005673transcription factor TFIIE complex
Homology
BLAST of NO19G00200 vs. NCBI_GenBank
Match: CCI39789.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 164.9 bits (416), Expect = 6.600e-37
Identity = 123/359 (34.26%), Postives = 191/359 (53.20%), Query Frame = 0
Query:  129 TATEILAAKIDPR---RNRPNTD--KLFDVVNFLQRVPEHRPVSADELLKEIGVDLRPDGGLDTCVNELLEGHPKVRVVPDRPGWFQYQAKYEIKNRGQLLAWLTRYNQGLAEADVKDTYLGVTHDLREMVRAGEVIAVKD-DGGRPVYFPRGRPFLVSLSGVGQRLRRVEGEDGSGQVSTTKDLRCEIRRGEGVRVAGEWFRVNTLESRKVQRLRAEPPLSISSGAGRRKWPPPD-YTEERVGYKEPFSLQDGLPLDHAPRMRHEQQHGREEGKNEDDGQALP-------LVRHGCTVDVRDLLWAATRQHVPTDEKELRARLQEAALGAHHAGPRRPKMSAATLKSQANKRKKQDKE 474
            +AT ++  K  P+    N P  D  K+++++ +L++VP H+PVS  ++ +  GVDL    G+D  V+  L+ +PKVRVV DR   + YQAKY+IKN+ QLL  L R  +G+   D+ D Y+ V  DL+ + R+GEVI VK  + G  V++PR   FLV +SGV         E GS   ++++D+  EIRRG+ +++   WFRV    S  V+   A  P   S  + +      D  T ++V Y   F  +D +P+D AP              + D   ALP       + +HGCT D+R+ LW  T ++ PTD  E   +L +A L        + K+ A+  + Q+ +R K+DK+
Sbjct:   16 SATTVIPIKEAPQIDISNVPKNDGAKVYNILEYLRKVPMHQPVSIKDIFQHTGVDL----GVDDQVDHRLKNNPKVRVVGDR---YAYQAKYDIKNKTQLLKMLDRTPEGIPTEDLMDCYVDVERDLQALARSGEVICVKHAEKGAEVFYPRDMSFLVDVSGV------ATVEPGSYITNSSQDVTNEIRRGDAIKIGNHWFRV----SGAVKTSSASRPAPFSGMSSKSVSSVRDPNTSKKVRYLFKFD-KDHMPID-AP----FPDASNNTAASMDRWDALPRRGPKFQMTKHGCTNDIRE-LWQNTMRNFPTDRNEFYKKLVQAGL------TTQSKVDAS--RRQSKRRLKEDKK 342          
BLAST of NO19G00200 vs. NCBI_GenBank
Match: CCA15575.1 (conserved hypothetical protein [Albugo laibachii Nc14])

HSP 1 Score: 162.2 bits (409), Expect = 4.300e-36
Identity = 119/355 (33.52%), Postives = 188/355 (52.96%), Query Frame = 0
Query:  129 TATEILAAKIDPR---RNRPNTD--KLFDVVNFLQRVPEHRPVSADELLKEIGVDLRPDGGLDTCVNELLEGHPKVRVVPDRPGWFQYQAKYEIKNRGQLLAWLTRYNQGLAEADVKDTYLGVTHDLREMVRAGEVIAVKD-DGGRPVYFPRGRPFLVSLSGVGQRLRRVEGEDGSGQVSTTKDLRCEIRRGEGVRVAGEWFRVNTLESRKVQRLRAEPPLSISSGAGRRKWPPPD-YTEERVGYKEPFSLQDGLPLDHAP---RMRHEQQHGREEGKNEDDGQALPLVRHGCTVDVRDLLWAATRQHVPTDEKELRARLQEAALGAHHAGPRRPKMSAATLKSQANKRKKQDKE 474
            +AT ++  K  P+    N P  D  K+++++ +L++VP H+PV+  ++ +  GVDL    G+D  V++ L+ +PKVRV+ DR   + YQAKY+IKN+ QLL  L R  +G+   D+ D Y+ V  DL+ + R+GEVI VK+ + G  V++PR   FLV +SG+         E GS    +++D+  EIRRG+ +R+   WFRV    S  V+   A  P   +  + +      D  T ++V Y   F  +D +PLD AP      H              G    + +HGCT D+R+ LW  T  + PTD  E   +L +A L        + K+ A+  + Q+ +R K+DK+
Sbjct:   16 SATTVIPIKDAPQVDISNVPKNDGAKVYNILEYLRKVPMHQPVTIRDIFQHTGVDL----GVDDQVDQRLKNNPKVRVIGDR---YAYQAKYDIKNQIQLLKMLDRTPEGIPMEDLMDCYVDVERDLQRLARSGEVICVKNAEKGAEVFYPRDMSFLVDVSGI------TTAEPGSYITHSSQDVTNEIRRGDAIRIGNHWFRV----SGAVKTSNASRPAPFAGMSSKSVSSVRDPNTSKKVRYLFKFD-KDHMPLD-APFPDANNHTIASMDRWDALPKRGPKFQMTKHGCTNDIRE-LWQNTMHNFPTDRNEFYKKLVQAGL------TTQSKVDAS--RRQSKRRLKEDKK 342          
BLAST of NO19G00200 vs. NCBI_GenBank
Match: XP_002997909.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY67747.1 conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 155.2 bits (391), Expect = 5.300e-34
Identity = 124/375 (33.07%), Postives = 183/375 (48.80%), Query Frame = 0
Query:  128 RTATEILAAKIDPRRNRPNTD--KLFDVVNFLQRVPEHRPVSADELLKEIGVDLRPDGGLDTCVNELLEGHPKVRVVPDRPGWFQYQAKYEIKNRGQLLAWLTRYNQGLAEADVKDTYLGVTHDLREMVRAGEVIAVKD-DGGRPVYFPRGRPFLVSLSGVGQRLRRVEGEDGSGQVSTTKDLRCEIRRGEGVRVAGEWFRVN-TLESRKVQRLRAEPPLSISSGAGRRKWPPPDYTEERVGYKEPFSLQDGLPLD--HAPRMRHEQQHGREEGKNEDDGQALPLVRHGCTVDVRDLLWAATRQHVPTDEKELRARLQEAALGAH---HAGPRRPKMSAATLKSQANKRKKQDKEAAWRDDIRAKAAAIQAMQQQ 494
            ++  E + +++D   + P  D  K++ ++ FL++VP H+PVS  ++ K  GVDL     +D  V + L+ +PKVR+  D+   + YQAKY+IKNR QLL  L R  +G+   D+ D Y+ V  DL+E+ R GE+I +K+ D G  VY+ RG P+LV LSGV         E GS  V ++ D   EIRRG+  RV   WFRV+  ++S    R      ++  S +  R         +++ Y   F  +D LPLD       R               G    +V+HGCT D+R  LW  T +  PTD  E   +L +A L       A  R+ K      K +   RK++D +      I  K   I A   Q
Sbjct:   23 KSVKETVVSQVD-ASSVPKNDGAKVYKILEFLRKVPMHKPVSVTDIFKHTGVDLT----MDDQVEQRLKNNPKVRLQGDQ---YAYQAKYDIKNRMQLLKILDRIPEGMPIEDLIDCYVNVEDDLKELTRTGEIICLKNADKGAEVYYSRGSPYLVDLSGV------ATVEAGSYLVHSSHDTTDEIRRGDAFRVGDNWFRVSAAVKSSSTTRPAPFAGMATKSVSSTRDL----NVSKKIKYMFKFD-KDHLPLDVPFPDAKRRNIASSDRWDLLPKRGPKFQMVKHGCTNDIRQ-LWRDTLRTWPTDRAEFEKKLVQAGLTTQAKVDANRRQMKRRLKEDKKKNRPRKQRDIKITNHHLIGTKLGEILAKGSQ 377          
BLAST of NO19G00200 vs. NCBI_GenBank
Match: XP_008891869.1 (hypothetical protein PPTG_02517 [Phytophthora parasitica INRA-310] >ETI49934.1 hypothetical protein F443_06403 [Phytophthora parasitica P1569] >ETK89812.1 hypothetical protein L915_06289 [Phytophthora parasitica] >ETL43211.1 hypothetical protein L916_06226 [Phytophthora parasitica] >ETL96401.1 hypothetical protein L917_06098 [Phytophthora parasitica] >ETM49556.1 hypothetical protein L914_06221 [Phytophthora parasitica] >ETN22636.1 hypothetical protein PPTG_02517 [Phytophthora parasitica INRA-310] >ETO78682.1 hypothetical protein F444_06466 [Phytophthora parasitica P1976] >ETP19702.1 hypothetical protein F441_06411 [Phytophthora parasitica CJ01A1] >ETP47636.1 hypothetical protein F442_06446 [Phytophthora parasitica P10297] >KUF79809.1 General transcription factor IIE subunit 2 [Phytophthora nicotianae])

HSP 1 Score: 153.3 bits (386), Expect = 2.000e-33
Identity = 116/352 (32.95%), Postives = 179/352 (50.85%), Query Frame = 0
Query:  128 RTATEILAAKIDPRRNRPNTD--KLFDVVNFLQRVPEHRPVSADELLKEIGVDLRPDGGLDTCVNELLEGHPKVRVVPDRPGWFQYQAKYEIKNRGQLLAWLTRYNQGLAEADVKDTYLGVTHDLREMVRAGEVIAVKD-DGGRPVYFPRGRPFLVSLSGVGQRLRRVEGEDGSGQVSTTKDLRCEIRRGEGVRVAGEWFRVN-TLESRKVQRLRAEPPLSISSGAGRRKWPPPDYTEERVGYKEPFSLQDGLPLD--HAPRMRHEQQHGREEGKNEDDGQALPLVRHGCTVDVRDLLWAATRQHVPTDEKELRARLQEAALGAHHAGPRRPKMSAATLKSQANKRKKQDKE 474
            ++  E + +++D   + P  D  K++ ++ FL++VP H PVS  ++ K  GVDL     +D  V + L+ +PKVR+  D+   + YQAKY+IKNR QLL  L R  +G+   D+ D Y+ V  DL+E+ R GE+I +K+ D G  VY+ R  PFLV LSGV         E GS    +++DL  E+RRG+  R+   WFRV+  ++S    R      ++  S +  R         +++ Y   F  +D LPLD       R               G    +V+HGCT D+R  LW  T +  P+D  E   +L +A L        + K+ A+  + Q  +R K+DK+
Sbjct:   23 KSVKETVVSQVD-ASSVPKNDGAKVYKILEFLRKVPMHMPVSVTDIFKHTGVDLT----MDDQVEQRLKNNPKVRLKGDQ---YAYQAKYDIKNRMQLLKILDRIPEGMPIEDLIDCYVNVEDDLKELTRTGEIICLKNADKGAEVYYSRVVPFLVDLSGV------ATVEAGSYLAHSSQDLTGEVRRGDAFRIGDNWFRVSAAVKSSSTTRPAPFAGMATKSVSSTR----DPNVSKKIKYMFKFD-KDHLPLDVPFPDAKRRNVASSDRWDLLPKRGPKFQMVKHGCTNDIRQ-LWRDTLRTWPSDRAEFEKKLVQAGL------TTQAKVDAS--RRQMKRRLKEDKK 346          
BLAST of NO19G00200 vs. NCBI_GenBank
Match: XP_009519193.1 (hypothetical protein PHYSODRAFT_325079 [Phytophthora sojae] >EGZ23905.1 hypothetical protein PHYSODRAFT_325079 [Phytophthora sojae])

HSP 1 Score: 150.2 bits (378), Expect = 1.700e-32
Identity = 113/348 (32.47%), Postives = 180/348 (51.72%), Query Frame = 0
Query:  132 EILAAKIDPRRNRPNTD--KLFDVVNFLQRVPEHRPVSADELLKEIGVDLRPDGGLDTCVNELLEGHPKVRVVPDRPGWFQYQAKYEIKNRGQLLAWLTRYNQGLAEADVKDTYLGVTHDLREMVRAGEVIAVKD-DGGRPVYFPRGRPFLVSLSGVGQRLRRVEGEDGSGQVSTTKDLRCEIRRGEGVRVAGEWFRVN-TLESRKVQRLRAEPPLSISSGAGRRKWPPPDYTEERVGYKEPFSLQDGLPLD--HAPRMRHEQQHGREEGKNEDDGQALPLVRHGCTVDVRDLLWAATRQHVPTDEKELRARLQEAALGAHHAGPRRPKMSAATLKSQANKRKKQDKE 474
            E++ +++D   + P  D  K++ ++ +L++VP H+ V+  ++ K  GVDL     +D  V + L+ +PKVRV  D+   + YQAKY+IKNR QLL  L R  +G+   D+ D Y+GV  DL+E+ R GE+I +K+ D G  VY+ RG  FLV LSGV         E GS    +++++  EIRRG+ +R+   WFRV+  ++S    R      ++  S +  R         +++ Y   F  +D LPLD       R               G    +V+HGC+ D+R  LW  T +  P+D  E   +L +A L        + K+ A+  + Q  +R K+DK+
Sbjct:   28 ELVVSQVD-ASSVPKNDGAKVYKILEYLRKVPMHKAVAVADIFKHTGVDLT----MDDQVEQRLKNNPKVRVQGDQ---YAYQAKYDIKNRMQLLKILDRIPEGMPIEDLIDCYVGVEDDLKELTRTGEIICLKNADKGAEVYYSRGPAFLVDLSGV------ATVEAGSYLAHSSQEITGEIRRGDALRIGDNWFRVSAAVKSSSTTRPAPFAGMATKSVSSTR----DPNVSKKIKYMFKFD-KDHLPLDVPFPDAKRRNIASSDRWDLLPKRGPKFQMVKHGCSNDIRQ-LWRDTLRAWPSDRAEFEKKLVQAGL------TTQAKVDAS--RRQMKRRLKEDKK 347          
BLAST of NO19G00200 vs. NCBI_GenBank
Match: XP_024586451.1 (transcription initiation factor-related family protein [Plasmopara halstedii] >CEG50082.1 transcription initiation factor-related family protein [Plasmopara halstedii])

HSP 1 Score: 147.5 bits (371), Expect = 1.100e-31
Identity = 118/352 (33.52%), Postives = 171/352 (48.58%), Query Frame = 0
Query:  149 KLFDVVNFLQRVPEHRPVSADELLKEIGVDLRPDGGLDTCVNELLEGHPKVRVVPDRPGWFQYQAKYEIKNRGQLLAWLTRYNQGLAEADVKDTYLGVTHDLREMVRAGEVIAVKD-DGGRPVYFPRGRPFLVSLSGVGQRLRRVEGEDGSGQVSTTKDLRCEIRRGEGVRVAGEWFRVNTLESRKVQRLRAEPPLSISSGAGRRKWPPPD-YTEERVGYKEPFSLQDGLPLD--HAPRMRHEQQHGREEGKNEDDGQALPLVRHGCTVDVRDLLWAATRQHVPTDEKELRARLQEAALGAH---HAGPRRPKMSAATLKSQANKRKKQDKEAAWRDDIRAKAAAIQAMQQQ 494
            K++ ++ FL++VP H+ VS  E+ K  GVDL     +D  V + L+ +PKVR+  D    + YQAKY+IKNR QLL  L R  +G+   D+ D Y+ V  DL+E+ R GE+I +K+ D G  VY+ RG  FLV LSGV         E GS    +++D+  EIRRG+ +RV   WFRV    S  V+   A  P+  +  A +      D    +++ +   F  +D LPLD       R               G    +V+HGC+ D+R  LW  T +  P+D  E   +L +A L       A  R+ K      K +   RK++D +      I  K   I A   Q
Sbjct:   44 KVYKILEFLRKVPMHKAVSVAEIFKHTGVDLT----MDDQVEQRLKNNPKVRLQGDH---YAYQAKYDIKNRMQLLKILDRTPEGMPIEDLIDCYVSVEDDLKELTRTGEIICLKNADKGAEVYYSRGSAFLVDLSGV------ATVEAGSYLAHSSEDITEEIRRGDALRVGDNWFRV----SAAVKSSSASRPVPFAGMATKSVSSTRDPNVSKKIKFMFKFD-KDHLPLDIPFPDAKRRSIASSDRWDLLPKRGPKFQMVKHGCSNDIRQ-LWRDTMRTWPSDRAEFEKKLVQAGLTTQAKVDANRRQMKRRLKEDKKKNRPRKQRDIKITNHHLIGTKLGEILAKGSQ 376          
BLAST of NO19G00200 vs. NCBI_GenBank
Match: OQR85258.1 (hypothetical protein ACHHYP_12038 [Achlya hypogyna])

HSP 1 Score: 146.7 bits (369), Expect = 1.900e-31
Identity = 109/332 (32.83%), Postives = 164/332 (49.40%), Query Frame = 0
Query:  149 KLFDVVNFLQRVPEHRPVSADELLKEIGVDLRPDGGLDTCVNELLEGHPKVRVVPDRPGWFQYQAKYEIKNRGQLLAWLTRYNQGLAEADVKDTYLGVTHDLREMVRAGEVIAVKD-DGGRPVYFPRGRPFLVSLSGVGQRLRRVEGEDGSGQVSTTKDLRCEIRRGEGVRVAGEWFRVNTLESRKVQRLRAEPPLSISSGAGRR---KWPPPDYTEERVGYKEPFSLQDGLPLDHA-PRMRHEQQHGRE---EGKNEDDGQALPLVRHGCTVDVRDLLWAATRQHVPTDEKELRARLQEAAL--GAHHAGPRRPKMSAATLKSQANKRKKQ 471
            +L +++ +L  +P H+PVS  ++ +  G+DL  D      V + L  +PKVRVV D    F Y+AKY+IK++ QL   L R N+G+  +D+KD Y GV  DLRE+ RAG VI +K+ + G  V++ RG  F   +      L  VEG  GS   +   D+  E+RRG+ +RV   WFRV+  E +       +P  SI      +        + T ++  Y  PF     LPLD   P  RH   H  +     K       + L++HGCT D+R  LW  T  + P+D   L  +L ++ L   A+    R  +      K +  ++KKQ
Sbjct:   40 RLHNILTYLNSIPNHQPVSIQDIYQHTGIDLNIDE-----VADRLRNNPKVRVVNDT---FAYKAKYDIKDKDQLQHVLKRVNEGIPGSDLKDCYQGVEDDLRELSRAGHVICIKNTETGVEVFYARGFSFYTQVGA----LATVEG--GSYVTTVNHDVTAELRRGDAIRVGDHWFRVSNAEKKGPMGNPPQPFTSIHPTVANKSVSSMADLNLTSKKTKYMLPFDAHH-LPLDMPYPDHRHGHLHHPKWDIAPKFGKGAGTVALLKHGCTNDIRQ-LWRDTVNNWPSDRAALEKKLVQSGLTTQANLDATRAKRKLHIKSKGKVARQKKQ 355          
BLAST of NO19G00200 vs. NCBI_GenBank
Match: KUF96945.1 (Ubiquitin-conjugating enzyme E2 N [Phytophthora nicotianae])

HSP 1 Score: 146.4 bits (368), Expect = 2.400e-31
Identity = 114/352 (32.39%), Postives = 175/352 (49.72%), Query Frame = 0
Query:  128 RTATEILAAKIDPRRNRPNTD--KLFDVVNFLQRVPEHRPVSADELLKEIGVDLRPDGGLDTCVNELLEGHPKVRVVPDRPGWFQYQAKYEIKNRGQLLAWLTRYNQGLAEADVKDTYLGVTHDLREMVRAGEVIAVKD-DGGRPVYFPRGRPFLVSLSGVGQRLRRVEGEDGSGQVSTTKDLRCEIRRGEGVRVAGEWFRVN-TLESRKVQRLRAEPPLSISSGAGRRKWPPPDYTEERVGYKEPFSLQDGLPLD--HAPRMRHEQQHGREEGKNEDDGQALPLVRHGCTVDVRDLLWAATRQHVPTDEKELRARLQEAALGAHHAGPRRPKMSAATLKSQANKRKKQDKE 474
            ++  E + +++D   + P  D  K++ ++ FL++VP H PVS  ++ K  GVDL     +D  V + L+ +PKVR+  D+   + YQAKY+IKNR QLL  L R  +G+   D+ D Y+ V  DL+E+ R GE+I +K+ D G  VY+ R  PFLV LSGV         E GS    +++DL  E+RRG+  R+   WFRV+  ++ R +  +     + +                  V Y   F  +D LPLD       R               G    +V+HGCT D+R  LW  T +  P+D  E   +L +A L        + K+ A+  + Q  +R K+DK+
Sbjct:   23 KSVKETVVSQVD-ASSVPKNDGAKVYKILEFLRKVPMHMPVSVTDIFKHTGVDLT----MDDQVEQRLKNNPKVRLKGDQ---YAYQAKYDIKNRMQLLKILDRIPEGMPIEDLIDCYVNVEDDLKELTRTGEIICLKNADKGAEVYYSRVVPFLVDLSGV------ATVEAGSYLAHSSQDLTGEVRRGDAFRIGDNWFRVSAAVKVRVIIHVLVLNNIQLKC---------------TVVYMFKFD-KDHLPLDVPFPDAKRRNVASSDRWDLLPKRGPKFQMVKHGCTNDIRQ-LWRDTLRTWPSDRAEFEKKLVQAGL------TTQAKVDAS--RRQMKRRLKEDKK 335          
BLAST of NO19G00200 vs. NCBI_GenBank
Match: XP_012204191.1 (hypothetical protein SPRG_09270 [Saprolegnia parasitica CBS 223.65] >KDO25122.1 hypothetical protein SPRG_09270 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 146.0 bits (367), Expect = 3.200e-31
Identity = 110/345 (31.88%), Postives = 169/345 (48.99%), Query Frame = 0
Query:  140 PRRNRPNT--DKLFDVVNFLQRVPEHRPVSADELLKEIGVDLRPDGGLDTCVNELLEGHPKVRVVPDRPGWFQYQAKYEIKNRGQLLAWLTRYNQGLAEADVKDTYLGVTHDLREMVRAGEVIAVKD-DGGRPVYFPRGRPFLVSLSGVGQRLRRVEGEDGSGQVSTTKDLRCEIRRGEGVRVAGEWFRVNTLESRKVQRLRAEPPLSISSGAGRR---KWPPPDYTEERVGYKEPFSLQDGLPLDHA-PRMRHEQQHGREEGKNEDDGQ---ALPLVRHGCTVDVRDLLWAATRQHVPTDEKELRARLQEAALGAH---HAGPRRPKMSAATLKSQANKRKKQD 472
            P  + P T   +L +++ +L  + +H+PV+  ++ +  G+DL  D      V + L  +PKVRV  D    F Y+AKY+IK++ QL   L R N+G+  +D+KD Y GV  DLRE+ RAG +I +K+ + G  VY+ RG  F   +      L  VEG  GS   +   D+  E+RRG+ +RV   WFRV+  E +       +P  SI      +        + T ++  Y  PF     LPLD   P  RH   H  +       G+    + L++HGCT D+RD LW  T +  PTD   L  +L ++ L       A   + K+   +    A  +K++D
Sbjct:   28 PTADVPTTVVGRLHNILTYLNSIKDHQPVTIQDIYQHTGIDLTIDE-----VADRLRNNPKVRVANDT---FAYKAKYDIKDKDQLQHVLKRVNEGIPSSDLKDCYNGVEDDLRELSRAGHIICIKNTETGTEVYYARGFSFFTQVGA----LATVEG--GSYVTTVNHDVTPELRRGDAIRVGDHWFRVSNAEKKGPMGNPPQPFTSIHPTVQNKSVSSMVDLNLTSKKTKYMLPFDAHH-LPLDMPFPDHRHGHMHHPKWDVAPKFGKGAGTVALLKHGCTNDIRD-LWRDTLRDWPTDRAALERKLVQSGLTTQANIDANRAKRKLHIKSKAKVARVKKQRD 356          
BLAST of NO19G00200 vs. NCBI_GenBank
Match: XP_009833390.1 (hypothetical protein H257_08984 [Aphanomyces astaci] >ETV77084.1 hypothetical protein H257_08984 [Aphanomyces astaci])

HSP 1 Score: 144.8 bits (364), Expect = 7.100e-31
Identity = 106/338 (31.36%), Postives = 167/338 (49.41%), Query Frame = 0
Query:  130 ATEILAAKIDPRRNRPNT--DKLFDVVNFLQRVPEHRPVSADELLKEIGVDLRPDGGLDTCVNELLEGHPKVRVVPDRPGWFQYQAKYEIKNRGQLLAWLTRYNQGLAEADVKDTYLGVTHDLREMVRAGEVIAVKD-DGGRPVYFPRGRPFLVSLSGVGQRLRRVEGEDGSGQVSTTKDLRCEIRRGEGVRVAGEWFRVNTLESRKVQRLRAEPPLSISSGAGRRKWPPPDY---TEERVGYKEPFSLQDGLPLDHA---PRMRHEQQHGREEGKNEDDGQALPLVRHGCTVDVRDLLWAATRQHVPTDEKELRARLQEAAL---GAHHAGPRRPKM 456
            +TE++ +++ P ++ P T   +L  V+ +L  +  H  V+  ++ ++ G+DL   G  + C  E +  +PKVR+  D+   F Y+AK++IK R  +L  L R  +G+   D+KD Y  V  DLR++ R G VI +++ + G  VY+PRG  FLV LSG G        E G   V+T +D+  EIRRG+ ++V  +WFRV+   + K     ++P   ++    +      D      ++  Y   F     +PLD A   PR         +       G  +PL++HGCT DVR  LW  T +  P D   L  +L +  L     H A   R KM
Sbjct:   19 STELVVSEVAP-KDVPETVVGRLQKVLEYLNSIANHAAVTVPQIYQKTGIDLASPGEYEVC--ERVRNNPKVRIEGDK---FAYKAKFDIKTRADVLRQLNRSPEGIPFRDLKDCYKNVEDDLRDLTRIGTVICIRNTEDGNDVYYPRGGQFLVELSGSGL------VEHGCFIVATKEDITSEIRRGDAIKVGDQWFRVSA--APKTGGGSSQPQTFMAGMTSKSVSSVRDLNLSASKKTRYHLNFD-SGHVPLDTAFPDPRGNIPLLQRWDAAPKPGRGLTVPLLKHGCTNDVRQ-LWRDTLRDWPADRLSLERKLLQCGLMTRDMHEANMHRSKM 340          
The following BLAST results are available for this feature:
BLAST of NO19G00200 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
CCI39789.16.600e-3734.26unnamed protein product [Albugo candida][more]
CCA15575.14.300e-3633.52conserved hypothetical protein [Albugo laibachii N... [more]
XP_002997909.15.300e-3433.07conserved hypothetical protein [Phytophthora infes... [more]
XP_008891869.12.000e-3332.95hypothetical protein PPTG_02517 [Phytophthora para... [more]
XP_009519193.11.700e-3232.47hypothetical protein PHYSODRAFT_325079 [Phytophtho... [more]
XP_024586451.11.100e-3133.52transcription initiation factor-related family pro... [more]
OQR85258.11.900e-3132.83hypothetical protein ACHHYP_12038 [Achlya hypogyna... [more]
KUF96945.12.400e-3132.39Ubiquitin-conjugating enzyme E2 N [Phytophthora ni... [more]
XP_012204191.13.200e-3131.88hypothetical protein SPRG_09270 [Saprolegnia paras... [more]
XP_009833390.17.100e-3131.36hypothetical protein H257_08984 [Aphanomyces astac... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL015nonsL015Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR055ncniR055Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR039ngnoR039Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK007686NSK007686Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO19G00200.1NO19G00200.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|674186gene_9770Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100581g4gene6947Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO19G00200.1NO19G00200.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO19G00200 ID=NO19G00200|Name=NO19G00200|organism=Nannochloropsis oceanica|type=gene|length=4144bp
GAACAAGTTAAGTCACGGCGCACCAACCCGGAAGACTTTTCATGAAGGCC
GCACGCAAACACATTATTATTCTCAAGCCACAGAGACGACTCCCACCACA
AGGCTTCACCAGTACCAGCAGAAGCACCTGCAGTAGCTATCGAAAGCTCT
TATCCGGGCTTCGTGCCGCACAGACTTCGCCAACACTTGCTTTATTTTCT
CTTTCTCCTCCCCCCTTACTCCCCCTTTCACAACACTACCTACAGAGGCA
GTGTCCAATGGCGGACCCGCGGGAAAAGATCTCGTATGGCTTCCAGTTCC
TCTCTCAGGTCGAGGAAAAGGGCCCAGGCAAGGTAGCAGGTGGAGCAGGA
GGTGCCGGCGTACAAGGTCAACAACAACAGCAGCAGCAGCAGCAGCAAGC
ACCCTCTCCCCCTGTGCCTCGACGAACGGCGACAGAAATTCTAGCAGCGA
Agtatgtacagggtagttagatggaggaggagaggatataggtagattga
gagaggcttgcctgtacccatgagtcctattatcgcgtgcgtcttatcgc
ttaccaacacatcccttcctccctgccctccctccctccctccaaccccg
cttccatcgttccactccttttttcaacttcctcgacgaagAATTGACCC
CCGTCGCAACCGTCCGAACACAGACAAGCTGTTCGACGTGGTCAATTTTC
TGCAGCGCGTGCCCGAGCATCGACCGgtgtgcgaggcggggagagggagg
gggagggagagagggaaagagggcaagtagaggcagggcgggtggagtgt
aaatgtttgcctctgcagtccatttcgaccgcagcgtgccgagagagggg
agaggaatttacgattcccatctgattatattcccctcctctccctccgt
tcctccctccgtccctacctccctccctcccagGTGTCGGCAGACGAGCT
CCTGAAGGAAATTGGCGTCGACCTGCGGCCAGACGGAGGGCTGGACACAT
GCGTGAATGAACTGCTGGAAGGCCATCCCAAGgtaacgagggaggaaggg
agggaggagggggggagaggatgatgaaccctagaaagtttcgaggaaaa
caaaggccgcgcaaacgcttttctttttctcttctcctctttccctccct
ccttccctttctagGTCCGCGTGGTTCCCGATAGGCCGGGGTGGTTTCAG
TATCAAGCCAAGTACGAGATCAAGAACCGAGGACAGCTCCTTGCCTGGCT
CACGCGTTACAACCAGgtacctccctccctccctccctccctccctccct
ccctccctccggctgggcctccctctcttcctttgggccttcttgaagta
catcattcatgaccgaaacgattcttctcctgacccctccctccctccct
ccctccctttcaccctccctctcaccctcagGGCCTTGCCGAGGCTGATG
TGAAAGATACCTACCTCGGCGTCACCCACGACCTACGAGAGATGGTGCGA
GCCGGAGAGGTGATAGCAGTGAAGgtatgtacgttccttgccctccctcc
ctccctccttccctcccttcctacctcccatcgtctgttgctttttcact
ttccctccctcctaccctccctccccccttccctcctttcgacgcccctc
tcacgaatggcacccccccaaggccctcagggcatgcgatgttcattatc
cctccctccctccctctccagGATGACGGTGGTCGCCCCGTCTACTTCCC
TCGAGGGAGGCCCTTCCTCGTGTCTCTCTCCGGCGTCGGGCAAAGGCTGC
GGCGGGTGGAGGGGGAGGACGGAAGCGGGCAGGTCAGCACTACCAAGGgt
aaggagggagggagggagggagggagagagggagggagggagggagggag
ggaatgcaagtggctgcgtggccgacccaggatctactcactcactcacc
cacccactcactcacttactcacttactcacgtatcgacagacttacggt
gtgagatccgatgaggagagtcacgctccaactcactcacttactcactc
acacacgtacattcagacttacggtgtgagatccgacgaggagagtcacg
ctccaactcactcacttactcactcacacacgtacatacagacttacggt
gtgagatccgacgaggagagtcacgctccaactcactcacttactcactc
acacacgtacacacagACTTACGGTGTGAGATCCGACGAGGGGAGGGAGT
GCGCGTGGCCGGGGAGTGGTTTCGGGTCAACACCCTCGAAAGCCGgtaag
ccctccctccctccctccctccctccctccctccctccctccctccctct
cctcctttccactcctcgttgactgatcctctccctgcggttacccgtcc
tgttcccttccctcctctacgctcccaaatacgacgcctggaagctggtc
attctctctacttatcttttttcattcctccctccctccccccctccctc
cctccttccctcttacagCAAGGTGCAGCGCCTACGGGCGGAGCCCCCTC
TTTCGATTTCTTCGGGAGCCGGTCGTCGCAAATGGCCACCACCCGATTAC
ACGgtaggtaggtaggtagggagggagggagggagggagttaagatgaag
aatctgtgcggggggaaaggaagaatgacatgacatgaagagaaagaaga
gaagatggagaagagggagaaagaagaggaggaagaagaatgggaggggg
aatagagggcagtagaggaggcaagttggttttgttcggaggcctttctg
tctttcccagcgtgtcggtcatgtgcatcatttgttgatgacaacctatt
cacgtatcctacccggaacccggaagGAGGAGAGAGTTGGCTACAAAGAG
CCTTTCTCCCTGCAGGACGGCCTGCCCCTCGACCACGCCCCCCGCATGAG
GCACGAGCAGCAACACGGGCGGGAGGAGGGCAAGAACGAGGACGACGGAC
AGGgtgcgtgtgctagcctatctgtgcgcgagtgtgtttgactgcccctc
cccttcatctcggccgatctctcttcctccccttcattattcgaccaggg
actcgacgagctcttaaggaaccgtctccttctgccctcacccacaattt
cctcccccctctttccctttctccctccctccctcccttcctccctccct
ccttccctccctccctccagCCCTGCCCCTGGTCCGACACGGGTGCACCG
TCGACGTGCGGGACTTGCTCTGGGCTGCGACGAGGCAACACGTCCCCACC
GACGAGAAGGAGCTTCGAGCCCGCTTGCAGGAGGCGGCCTTGGGAgtaag
aggggagggaggaaaaggaggcgggagcgaggggtaatagaaagtgggcg
aggtactcgcaggacaaaccgttcgattcgaaaaacagtatttgcaagtc
aggctcacgtgcttgctgttccgtccgtctcttccccccctccctccctc
cctctttccctccctcccattagGCTCACCACGCCGGTCCTCGTCGGCCA
AAAATGAGTGCCGCTACCCTCAAGAGCCAGGCCAACAAGAGGAAAAAACA
Ggtgcgttaatgcctggtggtagatgcgcagatctaccatttccctctct
tttccaaactcttttacttatcacttcggcaaccaggaagagaggacgat
aagaatctggttgcgtgttcatggataccccccttctctcatctacccct
ccacttccttccctccctccatcccttccttcttccctccctccaaccct
ccctccacctccctcttcagGACAAGGAGGCGGCGTGGCGGGACGACATC
CGAGCCAAGGCCGCGGCCATTCAAGCCATGCAGCAACAGGCCAAGAAGAA
GATCAAAAAGTAGGAATGGGGTGGAGCACGAGGGAGGAAAGTAGGAACAG
AGGGAGGGAGGAAAGGAAGGAGGGGGTTGAAATCGTGTTGCAGTAGCCTG
GTTAGGCACAGCAAAGGTCGAAAATAAAGATGGGAGAGGACCATGTAGTG
TAAATATGATAGCCAGGACGCATATGAAGGTCATGTTTATGTCATGTACC
ACATAAGAGACGAAGAAAAAGTAAAAAGACAAACGATGCGGATG
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protein sequence of NO19G00200.1

>NO19G00200.1-protein ID=NO19G00200.1-protein|Name=NO19G00200.1|organism=Nannochloropsis oceanica|type=polypeptide|length=501bp
MKAARKHIIILKPQRRLPPQGFTSTSRSTCSSYRKLLSGLRAAQTSPTLA
LFSLSPPPLLPLSQHYLQRQCPMADPREKISYGFQFLSQVEEKGPGKVAG
GAGGAGVQGQQQQQQQQQQAPSPPVPRRTATEILAAKIDPRRNRPNTDKL
FDVVNFLQRVPEHRPVSADELLKEIGVDLRPDGGLDTCVNELLEGHPKVR
VVPDRPGWFQYQAKYEIKNRGQLLAWLTRYNQGLAEADVKDTYLGVTHDL
REMVRAGEVIAVKDDGGRPVYFPRGRPFLVSLSGVGQRLRRVEGEDGSGQ
VSTTKDLRCEIRRGEGVRVAGEWFRVNTLESRKVQRLRAEPPLSISSGAG
RRKWPPPDYTEERVGYKEPFSLQDGLPLDHAPRMRHEQQHGREEGKNEDD
GQALPLVRHGCTVDVRDLLWAATRQHVPTDEKELRARLQEAALGAHHAGP
RRPKMSAATLKSQANKRKKQDKEAAWRDDIRAKAAAIQAMQQQAKKKIKK
*
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Synonyms
Publications