NO19G00100, NO19G00100 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO19G00100 vs. NCBI_GenBank
Match: EWM23494.1 (hypothetical protein Naga_100198g11 [Nannochloropsis gaditana]) HSP 1 Score: 273.5 bits (698), Expect = 7.900e-70 Identity = 140/257 (54.47%), Postives = 189/257 (73.54%), Query Frame = 0 Query: 43 RLMATRGILMLLVAC--VCGSVQGQLSARKKIASGSSKAGVA----EAWDQMGEQVKANAEAVKAAMPGLLDPVGSTSKLAFFQAVKKAGGVDAIELFDTVIKSKAFEKILENVEVQHRLMEEIPILGAIPGFLEVKGRRLSDEETKAGFRKGMQNMWNMMKTVAEHAKDPTLMNTKLVELSKSDDPEILALFKAAGENDEASIMELQNMVAADLYPGVDVSVMRDILDAQSFDKILSFPELSRFVDQDPYLAKVLR 294 R MAT L LL +C C QGQ + K + + K G+ E DQ GE+ K E VK+++ GL DPVGS K AFFQ VKK G+D++ELF+T+ KSKAFE ILENVE+QHR++E +PILGA+ GF E +GRRL+D+ET AGF KG++N+ M KT A+HA +PTLMN ++ ELSKSDDPEI LFK A ENDEAS++EL+N+ A DLYPGVD+ +++D++++ +FDK+L PE++RF+DQDPY+++V R Sbjct: 53 RSMATLRFLALLFSCFYFCVRCQGQRFSDLKNMAANQKGGIVTVGNEFKDQAGEKFKERTEEVKSSLQGLFDPVGSPGKSAFFQKVKK-DGIDSVELFETLFKSKAFESILENVEIQHRIIEGVPILGAVSGFREARGRRLTDQETTAGFSKGVRNLLEMFKTSAKHALNPTLMNERIAELSKSDDPEIQDLFKGASENDEASVLELKNLAARDLYPGVDLEILQDVMNSLTFDKLLDIPEMARFIDQDPYISRVFR 308
BLAST of NO19G00100 vs. NCBI_GenBank
Match: XP_005854240.1 (hypothetical protein NGA_0024302 [Nannochloropsis gaditana CCMP526] >EKU22120.1 hypothetical protein NGA_0024302 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 156.0 bits (393), Expect = 1.800e-34 Identity = 87/166 (52.41%), Postives = 113/166 (68.07%), Query Frame = 0 Query: 45 MATRGILMLLVAC--VCGSVQGQLSARKKIASGSSKAGVA----EAWDQMGEQVKANAEAVKAAMPGLLDPVGSTSKLAFFQAVKKAGGVDAIELFDTVIKSKAFEKILENVEVQHRLMEEIPILGAIPGFLEVKGRRLSDEETKAGFRKGMQNMWNMMKTVAEHA 205 MAT L LL +C C QGQ + K + + K G+ E DQ GE+ K E VK+++ GL DPVGS K AFFQ VKK G+D++ELF+T+ KSKAFE ILENVE+QHR++E +PILGA+ GF E +GRRL+D+ET AGF KG++N+ M KT A+HA Sbjct: 1 MATLRFLALLFSCFYFCVRCQGQRFSDLKNMAANQKGGIVTVGNEFKDQAGEKFKERTEEVKSSLQGLFDPVGSPGKSAFFQKVKK-DGIDSVELFETLFKSKAFESILENVEIQHRIIEGVPILGAVSGFREARGRRLTDQETTAGFSKGVRNLLEMFKTSAKHA 165
BLAST of NO19G00100 vs. NCBI_GenBank
Match: EWM25436.1 (hypothetical protein Naga_100005g87 [Nannochloropsis gaditana]) HSP 1 Score: 149.1 bits (375), Expect = 2.200e-32 Identity = 75/196 (38.27%), Postives = 122/196 (62.24%), Query Frame = 0 Query: 99 VKAAMPGLLDPVGSTSKLAFFQAVKKAGGVDAIELFDTVIKSKAFEKILENVEVQHRLMEEIPILGAIPGFLEVKGRRLSDEETKAGFRKGMQNMWNMMKTVAEHAKDPTLMNTKLVELSKSDDPEILALFKAAGENDEASIMELQNMVAADLYPGVDVSVMRDILDAQSFDKILSFPELSRFVDQDPYLAKVLRT 295 ++ A G P+ K+AF Q + K G VD +ELF +KSKAF+ +L+NVE+QHR+++E+P+L A GF ++ GRRLS ET GF G+QN+ + K KDP + +++ +P I +LF+ A E D A++ ELQ++ +PGVD+ V+R++ +F+K+LS PE+ RF+D++ + + R+ Sbjct: 106 LQQAASGFDQPLRPNDKVAFLQKIAK-GNVDPLELFTRGVKSKAFQAVLKNVEIQHRILKEMPLLAAFDGFRQITGRRLSARETMEGFAIGVQNVIDFAKVAFIKVKDPQQTAATIAKMAADPNPAIQSLFRRAQEGDPAAVEELQDVFNDLHFPGVDMRVLREVRRNHTFEKLLSMPEIMRFIDRNEFASNFFRS 300
BLAST of NO19G00100 vs. NCBI_GenBank
Match: EWM24107.1 (hypothetical protein Naga_100286g4 [Nannochloropsis gaditana]) HSP 1 Score: 107.1 bits (266), Expect = 9.700e-20 Identity = 61/195 (31.28%), Postives = 97/195 (49.74%), Query Frame = 0 Query: 98 AVKAAMPGLLDPVGSTSKLAFFQAVKKAGGVDAIELFDTVIKSKAFEKILENVEVQHRLMEEIPILGAIPGFLEVKGRRLSDEETKAGFRKGMQNMWNMMKTVAEHAKDPTLMNTKLVELSKSDDPEILALFKAAGENDEASIMELQNMVAADLYPGVDVSVMRDILDAQSFDKILSFPELSRFVDQDPYLAKVL 293 A K M L ++L Q K G+D ++LF+T S + IL++VE QH++ME +P+L A GF E+ GRRL D T AGF G+ ++ + + + KDP++ L EL D I F AA D ++ + + LYPGV+ V++ + + K+ E+ R ++ DP + L Sbjct: 39 AAKDVMEDTLPAYKPDAELTMMQDTWK-NGLDIMKLFETSFASPGMKAILDDVETQHKIMENLPLLAAFDGFKEITGRRLDDAGTTAGFTAGLNSILKTLPDMLKTMKDPSISTRALSELLAEDANNISEAFAAASAGDGGAMDTVNEALNKKLYPGVNTDVLKTVSASDPLSKVTGNNEIMRLINDDPIVTAAL 232
BLAST of NO19G00100 vs. NCBI_GenBank
Match: XP_005853961.1 (hypothetical protein NGA_0461700 [Nannochloropsis gaditana CCMP526] >EKU22395.1 hypothetical protein NGA_0461700 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 106.7 bits (265), Expect = 1.300e-19 Identity = 61/195 (31.28%), Postives = 96/195 (49.23%), Query Frame = 0 Query: 98 AVKAAMPGLLDPVGSTSKLAFFQAVKKAGGVDAIELFDTVIKSKAFEKILENVEVQHRLMEEIPILGAIPGFLEVKGRRLSDEETKAGFRKGMQNMWNMMKTVAEHAKDPTLMNTKLVELSKSDDPEILALFKAAGENDEASIMELQNMVAADLYPGVDVSVMRDILDAQSFDKILSFPELSRFVDQDPYLAKVL 293 A K M L +L Q K G+D ++LF+T S + IL++VE QH++ME +P+L A GF E+ GRRL D T AGF G+ ++ + + + KDP++ L EL D I F AA D ++ + + LYPGV+ V++ + + K+ E+ R ++ DP + L Sbjct: 39 AAKDVMEDTLPAYKPDGELTMMQDTWK-NGLDIMKLFETSFASPGMKAILDDVETQHKIMENLPLLAAFDGFKEITGRRLDDAGTTAGFTAGLNSILKTLPDMLKTMKDPSISTRALSELLAEDANNISEAFAAASAGDGGAMDTVNEALNKKLYPGVNTDVLKTVSASDPLSKVTGNNEIMRLINDDPIVTAAL 232
BLAST of NO19G00100 vs. NCBI_GenBank
Match: EWM22205.1 (hypothetical protein Naga_100291g6 [Nannochloropsis gaditana]) HSP 1 Score: 103.6 bits (257), Expect = 1.100e-18 Identity = 55/162 (33.95%), Postives = 90/162 (55.56%), Query Frame = 0 Query: 131 IELFDTVIKSKAFEKILENVEVQHRLMEEIPILGAIPGFLEVK-GRRLSDEETKAGFRKGMQNMWNMM-KTVAEHAKDPTLMNTKLVELSKSDDPEILALFKAAGENDEASIMELQNMVAADLYPGVDVSVMRDILDAQSFDKILSFPELSRFVDQDPYLAK 291 +++F + +K F+ IL+N ++QHR++++ P+LGA+ GF +K RRLS EETK F GM + N+ +P ++ L +++ S DP I LFK A ++ ++ ELQ+ Y G+D R+I + DK PE+ F+ +D LAK Sbjct: 89 VQVFKDAMNTKGFKAILDNPDIQHRVLKDFPLLGALTGFSTIKDNRRLSAEETKNSFSTGMNTLLNLADDAFFNKVNEPDKVSATLAKMAASSDPGIQNLFKRARAGEQGAVEELQDEFVNQHYSGMDGKAFREISKQHNGDKFKQMPEMMHFIQKDASLAK 250
BLAST of NO19G00100 vs. NCBI_GenBank
Match: XP_005854196.1 (hypothetical protein NGA_0186800 [Nannochloropsis gaditana CCMP526] >EKU22160.1 hypothetical protein NGA_0186800 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 88.2 bits (217), Expect = 4.700e-14 Identity = 55/192 (28.65%), Postives = 90/192 (46.88%), Query Frame = 0 Query: 131 IELFDTVIKSKAFEKILENVEVQHRLMEEIPILGAIPGFLEVK-GRRLSDEE------------------------------TKAGFRKGMQNMWNMM-KTVAEHAKDPTLMNTKLVELSKSDDPEILALFKAAGENDEASIMELQNMVAADLYPGVDVSVMRDILDAQSFDKILSFPELSRFVDQDPYLAK 291 +++F + +K F+ IL+N ++QHR++++ P+LGA+ GF +K RRLS EE TK F GM + N+ +P ++ L +++ S DP I LFK A ++ ++ ELQ+ Y G+D R+I + DK PE+ F+ +D LAK Sbjct: 89 VQVFKDAMNTKGFKAILDNPDIQHRVLKDFPLLGALTGFSTIKDNRRLSAEEVRWQIRGKRRRKREGNLIYGRGNDETLNAQTKNSFSTGMNTLLNLADDAFFNKVNEPDKVSATLAKMAASSDPGIQNLFKRARAGEQGAVEELQDEFVNQHYSGMDGKAFREITKQHNGDKFKQMPEMMHFIQKDASLAK 280 The following BLAST results are available for this feature:
BLAST of NO19G00100 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 7
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO19G00100 ID=NO19G00100|Name=NO19G00100|organism=Nannochloropsis oceanica|type=gene|length=2472bpback to top protein sequence of NO19G00100.1 >NO19G00100.1-protein ID=NO19G00100.1-protein|Name=NO19G00100.1|organism=Nannochloropsis oceanica|type=polypeptide|length=297bpback to top Synonyms
Publications
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