NO18G02550, NO18G02550 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO18G02550 vs. NCBI_GenBank
Match: XP_005854650.1 (hypothetical protein NGA_0195700 [Nannochloropsis gaditana CCMP526] >EKU21707.1 hypothetical protein NGA_0195700 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 247.7 bits (631), Expect = 4.600e-62 Identity = 114/195 (58.46%), Postives = 147/195 (75.38%), Query Frame = 0 Query: 103 MLTNKAHVEEMKETWSKPDILRFLMDNTPFFKVIKPLRMLMDKEEITPQDGLNAVGIFKDAMIKVLDTIESVRSPEGMAKYMFDYSKLQDERWVIMLARMQRGDKTVQVEIQQYVVDRELGNLIDLDAMGFNGEEPEYIKMVRRTVKNQEPGLWEAVLKEDQLARKYMEEPTAVIKEIQDLTSEYARNIEGMANL 298 MLTNKAHV+E+K TWS P + RFL D TPF K KPLR L KE +TPQDG++AV FK+AM+KVL TIE+VR PEGMA MF+YS LQD WV ++AR+Q G+K Q+E+QQY++DRELG LIDL+ MGF+G+EP +K R TV+ +EP LW+++ ED +ARKYME P V+K++ DLTSE N++G L Sbjct: 1 MLTNKAHVDELKATWSDPVVFRFLRDQTPFLKAFKPLRPLFSKEALTPQDGVDAVETFKNAMLKVLATIEAVRDPEGMATLMFNYSNLQDPEWVSLIARLQAGEKEAQLELQQYILDRELGGLIDLNEMGFDGQEPSILKEARETVQREEPELWDSIFSEDPIARKYMEAPETVLKDVMDLTSECETNLKGKTTL 195
BLAST of NO18G02550 vs. NCBI_GenBank
Match: EWM24065.1 (hypothetical protein Naga_100063g14 [Nannochloropsis gaditana]) HSP 1 Score: 122.5 bits (306), Expect = 2.200e-24 Identity = 74/280 (26.43%), Postives = 142/280 (50.71%), Query Frame = 0 Query: 12 SVTRSTATVKKAEIFNTLAKQQRYLQGAQDVEAAVEETEIDHRELDPPPLGSANGDFSVLFESLTTPLVDWQWELAERAFAGDIFGVLKDSMLTNKAHVEEMKETWSKPDILRFLMDNTPFFKVIKPLR-MLMDK---EEITPQDGLNAVGIFKDAMIKVLDTIESVRSPEGMAKYMFDYSKLQDERWVIMLARMQRGDKTVQVEIQQYVVDRELGNLIDLDAMGFNGEEPEYIKMVRRTVKNQEPGLWEAVLKEDQLARKYMEEPTAVIKEIQDLTSEY 288 S R KK +F +++ D + + + P+ A DF E D ++ + + GD+ ++D L N A +++ W+ P + R L+ P F+ KP++ ++ DK E+ +P+DG+ A GIFK M++ +D ++++R PE A + Y++ +D+ + + A+ RG+ EI + + +ELG++IDLD +GF+G EP ++ R VK P ++ A++ + + +KYME+P ++E ++L + Sbjct: 38 STARKAGGAKKTGLFQRISRALDTGSAMDDDGTPFTDEMWEATRDEGEPVDPALMDFKNPVERTDAWKFDDGLKMLQTSMDGDLTNPVRD--LVNGA--KDLHAAWAVPHVFRALVTQVPLFQAFKPIQEIIKDKSRDEDYSPEDGVKAAGIFKSFMLRSMDVLDTLRDPEKFAAKLQGYAESKDKTLLDLFAKASRGEDENHKEINNFFMRQELGDVIDLDFLGFSGVEPSFLPGFRNQVKEFAPNMYNALMTDPNM-KKYMEDPFKAVEEGKELLRNF 312
BLAST of NO18G02550 vs. NCBI_GenBank
Match: EWM20189.1 (hypothetical protein Naga_101121g1 [Nannochloropsis gaditana]) HSP 1 Score: 108.2 bits (269), Expect = 4.400e-20 Identity = 73/243 (30.04%), Postives = 119/243 (48.97%), Query Frame = 0 Query: 60 PLGSANGDFSVLFESLTTPLVDWQWELAERAFAGDIFGVLKDSMLTNKAHVEEMKETWSKPDILRFLMDNTPFFKVIKPLRML--MDKEEITPQDGLNAVG----IFKDAMIKVLDTIESVRSPEGMAKY----MFDYSKLQDERWVIMLARMQRGDKTVQVEIQQYVVDRELGNLIDLDAMGFNGE-----EPEYIKMVRRTVKNQEPGLWEAVLKEDQLARKYMEEPTAV-IKEIQDLTSE 287 P + FS+L + +W +LA R GD F VLK+ +L+ ++++ WS P R L++ P K++ L D ++ TP DGL + KDAM K ++ I+ +S E + K+ + + + D + + ++ GD T E+ V D G L+D + MGF E EPE K++R V+ QEP LW+ + +D + M +P A +K IQDLT++ Sbjct: 86 PAATKASSFSILGGEKDSWAEEWDLKLARRLLDGDHFSVLKEMVLS-----KDLEVIWSTPYAARRLLEANPILKMLPGAAALAKKDLDDWTPADGLQILSRLRLFAKDAMEKTMENIDPSKSMESLEKFAHRGLREEHEGGDPKLKALFDKVAAGDDTAAKEVHDVVFDELWGGLVDKEQMGFGKEPGTMFEPEASKIMRDYVRTQEPALWDMMTMDDPFITQLMTDPLATPMKVIQDLTNQ 323
BLAST of NO18G02550 vs. NCBI_GenBank
Match: XP_005852429.1 (hypothetical protein NGA_0725900 [Nannochloropsis gaditana CCMP526] >EKU23403.1 hypothetical protein NGA_0725900 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 96.3 bits (238), Expect = 1.700e-16 Identity = 64/219 (29.22%), Postives = 105/219 (47.95%), Query Frame = 0 Query: 60 PLGSANGDFSVLFESLTTPLVDWQWELAERAFAGDIFGVLKDSMLTNKAHVEEMKETWSKPDILRFLMDNTPFFKVIKPLRML--MDKEEITPQDGLNAVG----IFKDAMIKVLDTIESVRSPEGMAKY----MFDYSKLQDERWVIMLARMQRGDKTVQVEIQQYVVDRELGNLIDLDAMGFNGE-----EPEYIKMVRRTVKNQEPGLWEAVLKED 264 P + FS+L + +W +LA R GD F VLK+ +L+ ++++ WS P R L++ P K++ L D ++ TP DGL + KDAM K ++ I+ +S E + K+ + + + D + + ++ GD T E+ V D G L+D + MGF E EPE K++R V+ QEP LW+ + +D Sbjct: 86 PAATKASSFSILGGEKDSWAEEWDLKLARRLLDGDHFSVLKEMVLS-----KDLEVIWSTPYAARRLLEANPILKMLPGAAALAKKDLDDWTPADGLQILSRLRLFAKDAMEKTMENIDPSKSMESLEKFAHRGLREEHEGGDPKLKALFDKVAAGDDTAAKEVHDVVFDELWGGLVDKEQMGFGKEPGTMFEPEASKIMRDYVRTQEPALWDMMTMDD 299
BLAST of NO18G02550 vs. NCBI_GenBank
Match: EWM20107.1 (hypothetical protein Naga_101770g1 [Nannochloropsis gaditana]) HSP 1 Score: 93.6 bits (231), Expect = 1.100e-15 Identity = 39/104 (37.50%), Postives = 72/104 (69.23%), Query Frame = 0 Query: 184 MFDYSKLQDERWVIMLARMQRGDKTVQVEIQQYVVDRELGNLIDLDAMGFNGEEPEYIKMVRRTVKNQEPGLWEAVLKEDQLARKYMEEPTAVIKEIQDLTSEY 288 M++Y+ D +W +L R+++GDKT +++QQ+++++E+G+LIDL+A GF G P+ + +V+ QEP +W +VL D +A++Y+E+P +KE D+ +Y Sbjct: 1 MYNYATSTDSKWRSLLERVEKGDKTASLDMQQFLLNKEIGDLIDLEAFGFGGVLPDVLSKAISSVREQEPLIWNSVL-SDPVAKRYLEDPMLAVKEALDVAKDY 103
BLAST of NO18G02550 vs. NCBI_GenBank
Match: EWM23474.1 (hypothetical protein Naga_101028g3, partial [Nannochloropsis gaditana]) HSP 1 Score: 85.5 bits (210), Expect = 3.000e-13 Identity = 36/73 (49.32%), Postives = 53/73 (72.60%), Query Frame = 0 Query: 225 LIDLDAMGFNGEEPEYIKMVRRTVKNQEPGLWEAVLKEDQLARKYMEEPTAVIKEIQDLTSEYARNIEGMANL 298 +IDL MGF+G+EP +K R TV+ +EP LW+++ +ED +ARKYME P V+K++ DLTSE+ N++G L Sbjct: 91 VIDLKEMGFDGQEPSILKEARETVQREEPELWDSIFREDPIARKYMEAPETVLKDVIDLTSEFETNLKGKTTL 163 The following BLAST results are available for this feature:
BLAST of NO18G02550 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 6
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO18G02550 ID=NO18G02550|Name=NO18G02550|organism=Nannochloropsis oceanica|type=gene|length=2147bpback to top protein sequence of NO18G02550.1 >NO18G02550.1-protein ID=NO18G02550.1-protein|Name=NO18G02550.1|organism=Nannochloropsis oceanica|type=polypeptide|length=298bpback to top Synonyms
Publications
|