|
|
Properties
| Property Name | Value |
|---|
| Description | Unknown protein |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| chr18 | genome | chr18:827126..830541 - |
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
| GO:0016020 | membrane |
Homology
BLAST of NO18G02540 vs. NCBI_GenBank
Match: EWM23463.1 (hypothetical protein Naga_101315g2, partial [Nannochloropsis gaditana]) HSP 1 Score: 115.2 bits (287), Expect = 4.800e-22 Identity = 83/151 (54.97%), Postives = 105/151 (69.54%), Query Frame = 0
Query: 1 MDQSVSLGGSAPEQKPDTGTTGINWAEKRARVSQTAKETAEYIKVXXXXXXXXXXXXXXXXXGAAVASTRETKEEVVREWVKSTGLGSLIYKSIMPAHWKLPVISLGMTVXXXXXXXXXXXXXXXXXXXXXXXXXXXPLTLLSQIVHNYCD 152
MDQ+VSLGGSAPE++P T G +WAEKR S+T KETA Y++ X ++ T+EEVVREW+KSTGLGS++Y+S++P HW++P ISLG+T+ XXXXXXXXXXXXXXXXXXXXXX L +Q+VH YCD
Sbjct: 1 MDQTVSLGGSAPEERPATEAKGFDWAEKREEASRTVKETAAYLQEHGQKTVTYLKTHGAAAXXXXXXXSQRTREEVVREWIKSTGLGSIVYRSLVPGHWRMPAISLGVTL---ALXXXXXXXXXXXXXXXXXXXXXXXXXLFNQMVHAYCD 148
The following BLAST results are available for this feature:
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO18G02540 ID=NO18G02540|Name=NO18G02540|organism=Nannochloropsis oceanica|type=gene|length=3416bp
TTGAAGTCATGTCGTGACAAATTGACGTTGCTCAGATGTGAGGTAAGATG
TGGCCCATGGGGCGCGCAGCAAGCTGCTGCTGCTTTCCGGCGAAGGAAAA
TAATCTACAACAGCGAACTCGGCTTCAGGTAGGAAACACCCAAATATCGG
CCCTGCATCCACACCATCAAGGTCAAGAACTTTGTTCTAAAGGTGCTGGA
AGGCTGAGTTGCAGGGCAATGGTGTGGCAGCGGTGAGAAGTGCAATACGA
TGTGCTCGGTGGATGATTTGCCGACCTCCCCACACATCACATTCCCTTAA
CACAGAACACAAACACACAGACATATAACACATCCCAACTTCCGACCGCC
AAGATGGACCAGAGCGTCTCTTTGGGTGGCTCTGCGCCGgtacgtttaca
aaggaaatttccatccccttttccctccctcctcttgattcggtcggccg
acccaaacgataaataattgcctttgcccataccaagattacttttccct
ccgattcccccaggggacatatgccttttgcgtgtcccctcttccttaca
ttcccttcctttctcccttcctcccttctcgccctctccagGAGCAAAAG
CCTGACACGGGCACCACGGGCATTAATTGGGCCGAAAAAAGGGCTAGGGT
TTCCCAGACCGCCAAGGAGACAGCAGAGTACATTAAGgtttgtagataaa
gaatgagatgaagggagggtggaagaggtggagggaaaggtggggaagga
ccctcgcctggtcgcaacattcgtgcaatccattcgaccatcttcctcct
tccgctccctccctctctccctccctcccctccttcctcagGTCCACGGC
AAGGAGACTGCAAGCTACATCAAGACGCAAAGTTCTGCCGCTGCGGGCGC
CGCTGTTGCCAGCACTCGAGAAACGAAGGAGGAGGTGGTGCGTGAGTGGG
TCAAGAGTACGGGCCTGGGTTCATTAATTTATAAAAGTATCATGCCGGCG
CATTGGAAGCTCCCTGTCATCTCGCTGGGGgtaaggagtgagggaggaag
ggagtgagggaggaagggagtgagggaaggagggagggagggagggggtg
atgctggagtagctcacaccgacttatggctgttttgccactcctccctt
tctccctccctccttccctacttaacctgcagATGACAGTCCTTCTGCTG
GTTGTGGCCATCGTCATTCTTGCCTCCTTCGACTCCAGCGCTGGCGGCTC
TCTCCTCATTCTAATGCTGCTGCCTCTGACGCTACTCAGCCAGATCGTCC
ACAACTACTGCGACGgtatgcacaccccttcctcccaccctccctccctc
cctccctccctccctccctccctccctccctccctccctccctacccccc
tccctcctcccttcctccctttctctacaaatataacgacggggaggaaa
acaagggggaagggctccccccctctctctctctctctctctctctctct
ctctgaccttagcttctgggtgtttctccgcccgttcgtcccctaccaac
agCCGCCCTGATGCTCCAAGTGGCTCAAAGCAAGGACAGCAACGGCGTGA
CCTCCCTCAAGAAGACAGCCGAGGGCCTCAACGgtacgtcccctcccatc
ctccctctctccctccctccctccctccttccttccctcttgacaactcg
gagcccttaattctctccctccctccctccctccctccctctctccctcc
agGCAATTGGGAGCCCATCCTAGGCCTCTCCATCGCCACATGGGCCGAGA
GCGTCTACGCCCTCACCACGGCTATCGTCCGCGGgtacgtcctccttccc
tccctccattcctccctccctccctccctccctccctccctccctccttc
ccttccttcctctcccgtcctcccatcctccttctgtctcctcctcccct
cgtcccctcctcccccccttttttcgttatggcggcgtcgccacaacctt
tccgcctgagccttcacctccctccctccctccctccctcccttcctcca
gCGTCATCTTCCTCTCCCAGCTTCCCTTCCGCCTGTGCCTCAGACCCTTT
ACCATCAACCGCCCCGTCGCCGCCGTGGATACCAACATGCAGgtattccc
tccctccctccctcccttccccccctcccttcgctctcggcatacacacc
ctaatccaatcctccttccctccctccctctccaactcccagATGACCAT
CGCCCTTGCCATTGTGGTGTTCGAGCGAGTCCCCGCCCGCCCCGCCGTCG
ACCATGCCGAGGTGTACTTCCTCCAGCAGgtgaggaggagggagggaggg
agggagggaggaagtgaggaagggagaggaggcaggacgcaccacgtctg
aaaggggctcgagctcagtcaatttcctccttccataaccccctcccccc
cccctccctccctccctccttccctccctctccaatttctgcactctcaa
aagcgtcctctcatctcctttacttcctccctccctccctccctccctcc
ctccctccctccctccctccctccctccctcccttccttcctccctctta
gGTGGGCTCTAAGCCCTACTACACCCGCACCCTCTACGGTATTCTCTCCG
TCACTGCCCTCCCCGTGCTCCTCCTCGGCATCATTCTCGCCGCCTGCGGC
TATCTGGCGgtacgtccctccctccctccctccctccctccctccctccc
tccctccctccctccctccctccctccctcccttccacccgttacccaga
atcttgcttccatcttctctccttctctctctccctccctccctccctcc
gtccctccctcacttgcagGCGGGCTATTCCCTCATTTTCATTCCCGTCG
TCCTGTCAATGTGGGCCTGGAACACGTGCGCTCATGgtagggagggagga
agggaggaagggagggagggaggaagggagggaggaagggagggaggaag
ggaggagggaaaggaggaagggaggaaggaagggagggagaaagggagga
agggaggaagggaggggtccggatgctctttgctttgataaaatcactat
ccttcattgatgccctgcctccttttctaatccctccctccctccctccc
tccctccctccctccagTCCTCGCCGTCGCCCACCACCGCTACAGCACCA
CGGGCAAGGATGATGTCCTCCTCCCCTCTGGTACGGTCGATCAGGTCTAC
CTGCCCACCCCCTCCGCCCCATCCTCCCTCCCGCCCTCGGCCTCGACCTC
GAGTCGCCCGGGGGTGGTGGAGAAAGGGGAAAAGGAGGAGACAAAGGTGG
AAGAGGGAGGGTTTTCTACTGTACGGGTTTAAGGGAGGGAGGGGGGTAGG
GAGGGAGGGAGGAATT back to topprotein sequence of NO18G02540.1 >NO18G02540.1-protein ID=NO18G02540.1-protein|Name=NO18G02540.1|organism=Nannochloropsis oceanica|type=polypeptide|length=395bp
MDQSVSLGGSAPEQKPDTGTTGINWAEKRARVSQTAKETAEYIKVHGKET
ASYIKTQSSAAAGAAVASTRETKEEVVREWVKSTGLGSLIYKSIMPAHWK
LPVISLGMTVLLLVVAIVILASFDSSAGGSLLILMLLPLTLLSQIVHNYC
DAALMLQVAQSKDSNGVTSLKKTAEGLNGNWEPILGLSIATWAESVYALT
TAIVRGVIFLSQLPFRLCLRPFTINRPVAAVDTNMQMTIALAIVVFERVP
ARPAVDHAEVYFLQQVGSKPYYTRTLYGILSVTALPVLLLGIILAACGYL
AAGYSLIFIPVVLSMWAWNTCAHVLAVAHHRYSTTGKDDVLLPSGTVDQV
YLPTPSAPSSLPPSASTSSRPGVVEKGEKEETKVEEGGFSTVRV* back to top
|