NO18G02250, NO18G02250 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO18G02250 vs. NCBI_GenBank
Match: EWM23432.1 (lactoylglutathione lyase [Nannochloropsis gaditana]) HSP 1 Score: 249.6 bits (636), Expect = 7.900e-63 Identity = 111/150 (74.00%), Postives = 127/150 (84.67%), Query Frame = 0 Query: 42 LSLNHISRECRDPETMADFYTSLLGFSRVPAPPFPFGVIWLSHPSGLTMHLIEGTAEYRLVEGPARDASRGEWSKEVFVQGKFDPIHIRRGHHLAWNVRDLEQVKRALEAKGIPFALSQVPGTNTKQLFAFDPEGNGLECVYNPPPEEEL 192 L LNH+SRECR+PETMA+FYTS++GFSRVPAPPFPF IWL HPSG+TMHLIEGT +Y LVEG ARDAS G S+ VF+QG FDPIHIRRGHHLAW V+DLE +K AL +GIPF S VPGT+T+Q+FAFDPEGNGLE VY PPP +EL Sbjct: 30 LLLNHVSRECRNPETMAEFYTSVMGFSRVPAPPFPFVTIWLYHPSGVTMHLIEGTPDYGLVEGSARDASTGNCSQHVFMQGNFDPIHIRRGHHLAWTVKDLESIKAALGTRGIPFGTSTVPGTDTRQVFAFDPEGNGLEFVYKPPPNQEL 179
BLAST of NO18G02250 vs. NCBI_GenBank
Match: PON80055.1 (Glyoxalase-like domain containing protein [Parasponia andersonii]) HSP 1 Score: 122.9 bits (307), Expect = 1.100e-24 Identity = 65/149 (43.62%), Postives = 83/149 (55.70%), Query Frame = 0 Query: 42 LSLNHISRECRDPETMADFYTSLLGFSRVPAPPF-PFGVIWLSHPSGLTMHLIEGTAEYRLVEGPARDASRGEWSKEVFVQGKFDPIHIRRGHHLAWNVRDLEQVKRALEAKGIPFALSQVPGTNTKQLFAFDPEGNGLECVYNPPPEE 190 +SLNHISRE D +A+FY + GF + +P F F VIWL+ PS T+HLIE +L EGP WS V DP HIRRGHH+ ++V + E L+ KGI S VP KQ+F FDP+GNGLE P++ Sbjct: 13 VSLNHISRESSDIRRLANFYKEIFGFEEIESPDFGDFKVIWLNLPSAFTLHLIERNPITKLPEGP--------WSATSPV---LDPSHIRRGHHICFSVSNFESFVHTLKEKGIENYRSSVPNRGVKQVFFFDPDGNGLEVASQGAPQQ 150
BLAST of NO18G02250 vs. NCBI_GenBank
Match: KVI03117.1 (Glyoxalase-like domain-containing protein [Cynara cardunculus var. scolymus]) HSP 1 Score: 116.3 bits (290), Expect = 1.000e-22 Identity = 58/144 (40.28%), Postives = 77/144 (53.47%), Query Frame = 0 Query: 42 LSLNHISRECRDPETMADFYTSLLGFSRVPAPPFPFGVIWLSHPSGLTMHLIEGTAEYRLVEGPARDASRGEWSKEVFVQGKFDPIHIRRGHHLAWNVRDLEQVKRALEAKGIPFALSQVPGTNTKQLFAFDPEGNGLECVYNP 186 +SLNH+SRE D + +A FY + GF R+ +P F F VIWL +HLIE +L EGP WS V DP ++ RGHHL ++V + + + L+ KGI P TKQ+F FDP+GNGLE P Sbjct: 6 VSLNHVSRESSDIDRLAQFYQEIFGFERIESPKFEFKVIWLRQSPSFYLHLIERDPSTKLPEGP--------WSSNAAVA---DPHNLHRGHHLCFSVSNFDSFVKTLKEKGIETHEKTQPNGKTKQVFFFDPDGNGLEVASQP 138
BLAST of NO18G02250 vs. NCBI_GenBank
Match: XP_024194725.1 (uncharacterized protein LOC112197971 [Rosa chinensis] >PRQ38622.1 putative lactoylglutathione lyase [Rosa chinensis]) HSP 1 Score: 116.3 bits (290), Expect = 1.000e-22 Identity = 61/140 (43.57%), Postives = 79/140 (56.43%), Query Frame = 0 Query: 42 LSLNHISRECRDPETMADFYTSLLGFSRVPAPPF-PFGVIWLSHPSGLTMHLIEGTAEYRLVEGPARDASRGEWSKEVFVQGKFDPIHIRRGHHLAWNVRDLEQVKRALEAKGIPFALSQVPGTNTKQLFAFDPEGNGLE 181 +SLNHISRE D +A+FY GF + +P F F VIWL+ PS +MHLIE Y+L EGP WS V DP H+ RGHH+ ++V + E + L+ KGI +P KQ+F FDP+GNGLE Sbjct: 10 VSLNHISRESSDIRRLAEFYKETFGFEEIESPNFGEFKVIWLNLPSAFSMHLIERNPTYQLPEGP--------WSATSPVA---DPSHLPRGHHICFSVSNFESFVQTLKEKGIQTFQRSLPNGKVKQVFFFDPDGNGLE 138
BLAST of NO18G02250 vs. NCBI_GenBank
Match: POO02158.1 (Glyoxalase-like domain containing protein [Trema orientalis]) HSP 1 Score: 115.2 bits (287), Expect = 2.300e-22 Identity = 65/158 (41.14%), Postives = 83/158 (52.53%), Query Frame = 0 Query: 42 LSLNHISRECRDPETMADFYTSLLGFSRVPAPPF-PFGVIWLSHPSGLTMHLIEGTAEYRLVEGPARDASRGEWSKEVFVQGKFDPIHIRRGHHLAWNVRDLEQVKRALEAKGIPFALSQVPGTNTKQLFAFDPE---------GNGLECVYNPPPEE 190 +SLNHISRE D +A+FY + GF + +P F F VIWL+ PS T+HLIE +L EGP WS V DP HIRRGHH+ ++V + E L+ KGI S VP KQ+F FDP+ GNGLE P++ Sbjct: 13 VSLNHISRESSDIRRLANFYKEIFGFKEIESPDFGDFKVIWLNLPSAFTLHLIERNPITKLPEGP--------WSATSPV---LDPSHIRRGHHICFSVSNFESFVHTLKEKGIENYQSSVPNRGVKQVFFFDPDGKLSSFFFFGNGLEVASQGAPQQ 159
BLAST of NO18G02250 vs. NCBI_GenBank
Match: OMO80740.1 (hypothetical protein CCACVL1_12778 [Corchorus capsularis]) HSP 1 Score: 114.8 bits (286), Expect = 3.000e-22 Identity = 56/144 (38.89%), Postives = 77/144 (53.47%), Query Frame = 0 Query: 44 LNHISRECRDPETMADFYTSLLGFSRVPAPPFPFGVIWLSHPSGLTMHLIEGTAEYRLVEGPARDASRGEWSKEVFVQGKFDPIHIRRGHHLAWNVRDLEQVKRALEAKGIPFALSQVPGTNTKQLFAFDPEGNGLECVYNPPP 188 LNHISRE D +A+FY + GF + +P F F VIWL+ P MHLIE + + +L EGP S DP H+ RGHH+ +NV + + ++L+ KGI +P +Q+F FDP+GNGLE P Sbjct: 212 LNHISRESSDIRRLANFYNEVFGFEEIESPKFEFKVIWLTLPGATPMHLIERSPDTKLPEGPYSATS-----------AVADPTHLPRGHHICFNVSNFDSFVQSLKDKGIETFQRTLPNGKVRQVFFFDPDGNGLEVASREDP 344
BLAST of NO18G02250 vs. NCBI_GenBank
Match: XP_004296757.1 (PREDICTED: lactoylglutathione lyase [Fragaria vesca subsp. vesca]) HSP 1 Score: 114.4 bits (285), Expect = 3.900e-22 Identity = 59/140 (42.14%), Postives = 80/140 (57.14%), Query Frame = 0 Query: 42 LSLNHISRECRDPETMADFYTSLLGFSRVPAPPF-PFGVIWLSHPSGLTMHLIEGTAEYRLVEGPARDASRGEWSKEVFVQGKFDPIHIRRGHHLAWNVRDLEQVKRALEAKGIPFALSQVPGTNTKQLFAFDPEGNGLE 181 +SLNHISRE D +A+FY + GF + +P F F VIWL+ PS +MHLIE Y+L EGP WS V DP H+ RGHH+ ++V + + + L+ KGI +P +Q+F FDP+GNGLE Sbjct: 9 VSLNHISRESSDIRRLAEFYKEIFGFEEIESPNFGEFKVIWLNLPSTFSMHLIERNPTYQLPEGP--------WSATSPVA---DPSHLPRGHHICFSVSNFDSFVQTLKEKGIQTFQRSLPNGKVRQVFFFDPDGNGLE 137
BLAST of NO18G02250 vs. NCBI_GenBank
Match: XP_024021232.1 (methylmalonyl-CoA epimerase, mitochondrial [Morus notabilis]) HSP 1 Score: 114.4 bits (285), Expect = 3.900e-22 Identity = 59/140 (42.14%), Postives = 79/140 (56.43%), Query Frame = 0 Query: 42 LSLNHISRECRDPETMADFYTSLLGFSRVPAPPF-PFGVIWLSHPSGLTMHLIEGTAEYRLVEGPARDASRGEWSKEVFVQGKFDPIHIRRGHHLAWNVRDLEQVKRALEAKGIPFALSQVPGTNTKQLFAFDPEGNGLE 181 +SLNHISRE D +A+FY + GF + P F F VIWL+ PS ++HLIE +L EGP WS V DP H+ RGHH+ ++V + + + L+ KG+ S VP KQ+F FDP+GNGLE Sbjct: 7 VSLNHISRESSDVTRLANFYKEIFGFEEIETPNFGEFKVIWLNLPSAFSLHLIERNPATKLPEGP--------WSATSAVA---DPSHLPRGHHICFSVDNFDSFVQTLKDKGVETFQSSVPSRGVKQVFFFDPDGNGLE 135
BLAST of NO18G02250 vs. NCBI_GenBank
Match: CDO99068.1 (unnamed protein product [Coffea canephora]) HSP 1 Score: 114.0 bits (284), Expect = 5.100e-22 Identity = 59/139 (42.45%), Postives = 76/139 (54.68%), Query Frame = 0 Query: 42 LSLNHISRECRDPETMADFYTSLLGFSRVPAPPFPFGVIWLSHPSGLTMHLIEGTAEYRLVEGPARDASRGEWSKEVFVQGKFDPIHIRRGHHLAWNVRDLEQVKRALEAKGIPFALSQVPGTNTKQLFAFDPEGNGLE 181 +SLNH+SRE D E +A FY + GF RV +P F F VIWL +HLIE +L EGP WS V DP H+ RGHH+ ++V + + +A++ KGI P TKQ F FDP+GNGLE Sbjct: 9 VSLNHVSRESSDIERLAQFYIEVFGFQRVESPKFEFDVIWLKLEPSFYLHLIERDPTTKLPEGP--------WSSTSAVA---DPKHLPRGHHICFSVSNFDSFVQAVKEKGIQIHHRTQPDGKTKQAFFFDPDGNGLE 136
BLAST of NO18G02250 vs. NCBI_GenBank
Match: XP_021811902.1 (lactoylglutathione lyase-like [Prunus avium]) HSP 1 Score: 113.6 bits (283), Expect = 6.700e-22 Identity = 59/139 (42.45%), Postives = 77/139 (55.40%), Query Frame = 0 Query: 42 LSLNHISRECRDPETMADFYTSLLGFSRVPAPPFPFGVIWLSHPSGLTMHLIEGTAEYRLVEGPARDASRGEWSKEVFVQGKFDPIHIRRGHHLAWNVRDLEQVKRALEAKGIPFALSQVPGTNTKQLFAFDPEGNGLE 181 +SLNHISRE D +A+FY + GF + +P F VIWL P G+ HLIE +Y L EGP WS V DP H+RRGHH+ ++V + + L+ KGI +P KQ+F FDP+GNGLE Sbjct: 9 VSLNHISRESSDIRRLANFYKEIFGFEEIESPNLEFKVIWLKGP-GVAFHLIERNPDYNLPEGP--------WSATSPVA---DPSHLRRGHHVCFSVSNFHSFVQTLKDKGIQTYEKSLPDGKVKQVFFFDPDGNGLE 135 The following BLAST results are available for this feature:
BLAST of NO18G02250 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO18G02250 ID=NO18G02250|Name=NO18G02250|organism=Nannochloropsis oceanica|type=gene|length=1024bpback to top protein sequence of NO18G02250.1 >NO18G02250.1-protein ID=NO18G02250.1-protein|Name=NO18G02250.1|organism=Nannochloropsis oceanica|type=polypeptide|length=192bpback to top Synonyms
Publications
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