NO18G02200, NO18G02200 (gene) Nannochloropsis oceanica

Overview
NameNO18G02200
Unique NameNO18G02200
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1477
Alignment locationchr18:705839..707315 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr18genomechr18:705839..707315 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO18G02200 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL008nonsL008Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR046ncniR046Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR043ngnoR043Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO18G02200.1NO18G02200.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO18G02200.1NO18G02200.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO18G02200 ID=NO18G02200|Name=NO18G02200|organism=Nannochloropsis oceanica|type=gene|length=1477bp
CACACAACGAAGATGCCAGCACAGCAATGTGTCTGTAGAAGTTTAAATAT
TTTCATTCTTTTGCAGAAAACTTTCATGAGTGTACTGTTCGTGGTAATGA
ATGAGAACTCACGGTCTCGAGCAGCGACCAGCAAAAACCAGCCACAAAGT
AAACGACGATCGTCTCTCGCGCTCTCGCTAATACCTTAAGACAGCATTGA
AGCGCGCGGTGCCTTTGAGCGGCATTCATGCTGGGCGGTCTGGTCTTGCC
ACGCGTCAATATTCATCATAGCGCGCTTGTTGATTCTTGGCGGTGTCGCC
GGCGGGGTGGCAGCAATTTTTGGCGTGGGCTTGGACACACAATGTTGTAA
GCTTCGGTTGTGTGAGGATTGCAACGTACTTGATATTCTTCGATGCCTTA
ATTCTTGTTTTGCTGACCTGCGCGTCGCAACTGCAACTAAGCAAGCACTG
TGGTCTGGTTTCGGCGATCATCCCCTGCAAGACATGTATGCGAGCATGTG
ACCAGTGTGATGGACAATTAAGATAAGGCATGGGATGGCAAGGGGACACG
AAGCTGCGACGACGAACGAGTTGCTTCTCCTTCTGCAAGCTTATTATTCG
CTGGGCGCTGCCTCTCCTTGTCATGCCGCAAGTCCACCCCTATGCTCCAG
gtaaggtaaaaatttgtctgggaggaagattgcgaataggaagatagagt
gtcggatgagacgttcctccttgtcatcgtctgacatatccatgactcgc
tcgcggcacgtacccaccctctctccaccccttcatcacagAGGCATGCA
TCCACTTCTTTATTTCCTTGCCAACTAACCGTTGCGGACGCTCAAAGACA
AAGGATGCTCTGCTGGAGGGgtaggtagtcgaccaggtggggatggcgga
agacaacctgtgtaggatggagacaatattgatgatgatgagaaggagca
ggggacgcaggatgtgcggatgatgggaaaagatctactgcagtgttcca
cagcatctcagggagttcatgtggacataatcacgtgatttcgaaacctt
tcttccatccctcccttcctttcacagCCCCCAGTACCACTTACGTGCCC
TCGCTGCTGCTCTTGGTGCTCCTCTTGCTCTGCTGCTCCTATCGCGGCCC
ACTGCCGCTGCAGGATGTTACAGCCCTGCCTTTCTTTTCAATGTGCCTTT
CTTGGCTTTGAAGGCGGCCGCGCTAATGTAGCGAGGCGGCAGAATGAAAA
GTAGGCGCCGTCCTTCACTTAGTCCTGCCTATATGTGAAGATTTGATGGG
TATCGATTGAGAGGACCGTGGGAAAGAGATGCTGATCAATTGAAATGGAA
ATAAAACAAGCGAAGAGGCTAATTGTGACATCACGCCGCCTTGAGAATAG
ATGCAGAGCGTAGAGTTGGGGTGGCCCCTGGTGTCACACGTGGCAAGTCA
GGGCAAGGTATATCTAAGACATGGAAA
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protein sequence of NO18G02200.1

>NO18G02200.1-protein ID=NO18G02200.1-protein|Name=NO18G02200.1|organism=Nannochloropsis oceanica|type=polypeptide|length=118bp
MGWQGDTKLRRRTSCFSFCKLIIRWALPLLVMPQVHPYAPEACIHFFISL
PTNRCGRSKTKDALLEGPQYHLRALAAALGAPLALLLLSRPTAAAGCYSP
AFLFNVPFLALKAAALM*
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Synonyms
Publications