NO18G02050, NO18G02050 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO18G02050 vs. NCBI_GenBank
Match: EWM23416.1 (hypothetical protein Naga_100077g10 [Nannochloropsis gaditana]) HSP 1 Score: 384.4 bits (986), Expect = 2.200e-103 Identity = 174/210 (82.86%), Postives = 194/210 (92.38%), Query Frame = 0 Query: 1 MSGSMKPYKWFPGTSGWVHEVLNKLPVNMRTKLRSLALFRPDDINDLYPFPRNRISYPGVERIKGFRYPAPGSRGKVNVPQSESDDRLYDIKYFDHDTRRRPQEIYSWTPDFKRVAQAESPEPAKLMGSPGNKNPAVLAYDPTGLRSAMSATNQELQKALDKAMPDHQVQYAWQGDEEAIIKKCEVNGLPVPPGKRAKFNIPVMSLQKRW 211 MSGSMKPYKWF GTSGW+HE+L KLP +M+TK+RS ALFRPDDINDLYPFPRNRISYPGVERIKG+RYPAPGSR KVNVPQSESDD+LYDIKYFDHDTRRRP E++SW+PDFKRVA +SPEPAKLMGSPGNKNPAVLAYDPTGLRSAMSATNQEL+KALD+AMP+H V+YAWQG+EE I+K CE GLPVPPGKRAKF +P M+ Q+RW Sbjct: 1 MSGSMKPYKWFSGTSGWIHELLAKLPKDMQTKIRSWALFRPDDINDLYPFPRNRISYPGVERIKGYRYPAPGSRPKVNVPQSESDDKLYDIKYFDHDTRRRPAEVFSWSPDFKRVALPDSPEPAKLMGSPGNKNPAVLAYDPTGLRSAMSATNQELEKALDRAMPNHNVRYAWQGEEEQIVKDCEAKGLPVPPGKRAKFAVPAMATQRRW 210
BLAST of NO18G02050 vs. NCBI_GenBank
Match: CBJ25711.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 137.9 bits (346), Expect = 3.700e-29 Identity = 73/196 (37.24%), Postives = 109/196 (55.61%), Query Frame = 0 Query: 25 LPVNMRTKLRSLALFRPDDINDLYPFPRNRISYPGVERIKGFRYPAPGSRGKVNVPQSESDDRLYDIKYFDHDTRRRPQEIYSWTPDFKRVAQAESPEPAKLMG----------SPGNKNPAVLAYDPTGLRSAMSATNQELQKALDKAMPDHQVQYAWQGDEEAIIKKCEVNGLPVPPGKRAKFNIPVMSLQKRW 211 +P ++ K+R++ F+P D N + P + + PG++ +R PAP S+ + NVP S++ D YDI YF DTRR P++I+S+ R+ E + +L+ S GNKNPAVL YDPTGLRS MSATN+ ++L + MP H V+ W + + + + GLP PPG+R + P S W Sbjct: 13 IPKDIHEKIRNVLEFKPKDPNRGWQVPPAKAATPGLKAKNEYRTPAPNSQPQANVPVSDNPDLQYDIGYFKRDTRRAPRQIHSYVAPSLRMLADERVKALELISNELGPEDPAPSQGNKNPAVLKYDPTGLRSTMSATNEAWTESLKEYMPTHNVKPWWWHSDVDHVAEAQAKGLPPPPGRRMDWEAPKSSKVASW 208
BLAST of NO18G02050 vs. NCBI_GenBank
Match: XP_024577993.1 (hypothetical protein PHALS_11957 [Plasmopara halstedii] >CEG41624.1 hypothetical protein PHALS_11957 [Plasmopara halstedii]) HSP 1 Score: 121.7 bits (304), Expect = 2.700e-24 Identity = 74/193 (38.34%), Postives = 101/193 (52.33%), Query Frame = 0 Query: 25 LPVNMRTKLRSLALFR----PDDINDLYPFPRNRISYPGVERIKGFRYPAPGSRGK-VNVPQSESDDRLYDIKYFDHDTRRRPQEI-YSWTPDFKRVAQAESPEPAKLMGSPGNKNPAVLAYDPTGLRSAMSATNQELQKALDKAMPDHQVQYAWQGD-EEAIIKKCEVNGLPVPPGKRAKFNIPVMSLQKRW 211 LP +R KLR L +F +N F +G+RYP+P + + V VP S+S D +Y+I Y+ D RR P I P + E P AK GSPGNKNPAVL+YDPTG RSAMS T++ K + + + H V++ W+GD E+ I++ C LP PG+ +N P S RW Sbjct: 19 LPAELRNKLRKLLVFTEATGTKQLNQSPAFS------------QGYRYPSPDKQAEGVFVPSSDSKDSIYNINYYTRDIRRFPFPIEVGMHPSLPIEKRVEIPADAK-RGSPGNKNPAVLSYDPTGTRSAMSTTHEARDKLIQQHVSTHNVRFEWEGDAEDEILEDCIAKNLPPAPGRPFVWNFPSQSRVMRW 198
BLAST of NO18G02050 vs. NCBI_GenBank
Match: XP_002897716.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY64789.1 conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 120.6 bits (301), Expect = 6.000e-24 Identity = 74/194 (38.14%), Postives = 103/194 (53.09%), Query Frame = 0 Query: 20 EVLNKLPVNMRTKLRSLALFRPDDINDLYPFPRNRISYPGVERIKGFRYPAPGSRGK-VNVPQSESDDRLYDIKYFDHDTRRRP-QEIYSWTPDFKRVAQAESPEPAKLMGSPGNKNPAVLAYDPTGLRSAMSATNQELQKALDKAMPDHQVQYAWQGD-EEAIIKKCEVNGLPVPPGKRAKFNIPVMSLQKRW 211 E N LP +R KLR + +F + P V +G+RYP+P + + V+VP S+S D +Y+I+Y+ D RR P P +AE P AK GSPGNKNPAVL YDPTG RSAMS T++ K + + H V++ W+GD E+ I++ E LP PG+ ++ P S RW Sbjct: 14 EYQNLLPAELRNKLRKMLVFTE------ATGTKQVHQSPAVS--QGYRYPSPDKQAEGVSVPSSDSKDSIYNIQYYTRDIRRFPFPTEVGMHPSIPMEKRAEIPADAK-RGSPGNKNPAVLRYDPTGTRSAMSTTHEARDKLILQHASTHNVRFEWEGDAEKEILEDLEAKNLPPTPGRPFVWDFPAQSRVMRW 198
BLAST of NO18G02050 vs. NCBI_GenBank
Match: XP_009527095.1 (hypothetical protein PHYSODRAFT_560449 [Phytophthora sojae] >EGZ18037.1 hypothetical protein PHYSODRAFT_560449 [Phytophthora sojae]) HSP 1 Score: 119.0 bits (297), Expect = 1.800e-23 Identity = 73/194 (37.63%), Postives = 103/194 (53.09%), Query Frame = 0 Query: 20 EVLNKLPVNMRTKLRSLALFRPDDINDLYPFPRNRISYPGVERIKGFRYPAPGSRGK-VNVPQSESDDRLYDIKYFDHDTRRRPQEI-YSWTPDFKRVAQAESPEPAKLMGSPGNKNPAVLAYDPTGLRSAMSATNQELQKALDKAMPDHQVQYAWQGD-EEAIIKKCEVNGLPVPPGKRAKFNIPVMSLQKRW 211 E N LP +R KLR + +F + P V +G+RYP+P + + V+VP S+S D +Y+I+Y+ D RR P P +AE P AK GSPGNKNPAVL YDPTG RSAMS T++ K + + H V++ W+GD E+ I++ + LP PG+ ++ P S RW Sbjct: 14 EYQNLLPAELRNKLRKMLVFTE------ATGTKQVHQSPAVS--QGYRYPSPDKQAEGVHVPSSDSKDSIYNIQYYTRDIRRFPYPTEVGMHPSIPVQKRAEIPADAK-RGSPGNKNPAVLRYDPTGTRSAMSTTHEARDKLILQHASTHNVRFEWEGDAEKDILEDADAKNLPPVPGRPFVWDFPAQSRVMRW 198
BLAST of NO18G02050 vs. NCBI_GenBank
Match: ETI55458.1 (hypothetical protein F443_01883 [Phytophthora parasitica P1569] >ETM01705.1 hypothetical protein L917_01734 [Phytophthora parasitica] >ETM54936.1 hypothetical protein L914_01784 [Phytophthora parasitica]) HSP 1 Score: 117.1 bits (292), Expect = 6.700e-23 Identity = 73/194 (37.63%), Postives = 103/194 (53.09%), Query Frame = 0 Query: 20 EVLNKLPVNMRTKLRSLALFRPDDINDLYPFPRNRISYPGVERIKGFRYPAPGSRGK-VNVPQSESDDRLYDIKYFDHDTRRRP-QEIYSWTPDFKRVAQAESPEPAKLMGSPGNKNPAVLAYDPTGLRSAMSATNQELQKALDKAMPDHQVQYAWQGD-EEAIIKKCEVNGLPVPPGKRAKFNIPVMSLQKRW 211 E N LP +R KLR + +F + P V +G+RYP+P + + V+VP S+S + +Y+I+Y+ D RR P P +AE P AK GSPGNKNPAVL YDPTG RSAMS T++ K + + H V++ W+GD E+ I++ E LP PG+ ++ P S RW Sbjct: 76 EYQNLLPAELRNKLRKMLVFTE------ATGTKQVNQSPAVS--QGYRYPSPDKQAEGVSVPSSDSKESIYNIQYYTRDIRRFPFPTEVGMHPSIPVEKRAEIPADAK-RGSPGNKNPAVLRYDPTGTRSAMSTTHEARDKLILQHASTHNVRFEWEGDAEKDILEDLEAKNLPPTPGRPFVWDFPSQSRVMRW 260
BLAST of NO18G02050 vs. NCBI_GenBank
Match: ETK95244.1 (hypothetical protein L915_01807 [Phytophthora parasitica] >ETP25263.1 hypothetical protein F441_01844 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 117.1 bits (292), Expect = 6.700e-23 Identity = 73/194 (37.63%), Postives = 103/194 (53.09%), Query Frame = 0 Query: 20 EVLNKLPVNMRTKLRSLALFRPDDINDLYPFPRNRISYPGVERIKGFRYPAPGSRGK-VNVPQSESDDRLYDIKYFDHDTRRRP-QEIYSWTPDFKRVAQAESPEPAKLMGSPGNKNPAVLAYDPTGLRSAMSATNQELQKALDKAMPDHQVQYAWQGD-EEAIIKKCEVNGLPVPPGKRAKFNIPVMSLQKRW 211 E N LP +R KLR + +F + P V +G+RYP+P + + V+VP S+S + +Y+I+Y+ D RR P P +AE P AK GSPGNKNPAVL YDPTG RSAMS T++ K + + H V++ W+GD E+ I++ E LP PG+ ++ P S RW Sbjct: 76 EYQNLLPAELRNKLRKMLVFTE------ATGTKQVNQSPAVS--QGYRYPSPDKQAEGVSVPSSDSKESIYNIQYYTRDIRRFPFPTEVGMHPSIPVEKRAEIPADAK-RGSPGNKNPAVLRYDPTGTRSAMSTTHEARDKLILQHASTHNVRFEWEGDAEKDILEDLEAKNLPPTPGRPFVWDFPSQSRVMRW 260
BLAST of NO18G02050 vs. NCBI_GenBank
Match: ETL48643.1 (hypothetical protein L916_01772 [Phytophthora parasitica]) HSP 1 Score: 117.1 bits (292), Expect = 6.700e-23 Identity = 73/194 (37.63%), Postives = 103/194 (53.09%), Query Frame = 0 Query: 20 EVLNKLPVNMRTKLRSLALFRPDDINDLYPFPRNRISYPGVERIKGFRYPAPGSRGK-VNVPQSESDDRLYDIKYFDHDTRRRP-QEIYSWTPDFKRVAQAESPEPAKLMGSPGNKNPAVLAYDPTGLRSAMSATNQELQKALDKAMPDHQVQYAWQGD-EEAIIKKCEVNGLPVPPGKRAKFNIPVMSLQKRW 211 E N LP +R KLR + +F + P V +G+RYP+P + + V+VP S+S + +Y+I+Y+ D RR P P +AE P AK GSPGNKNPAVL YDPTG RSAMS T++ K + + H V++ W+GD E+ I++ E LP PG+ ++ P S RW Sbjct: 76 EYQNLLPAELRNKLRKMLVFTE------ATGTKQVNQSPAVS--QGYRYPSPDKQAEGVSVPSSDSKESIYNIQYYTRDIRRFPFPTEVGMHPSIPVEKRAEIPADAK-RGSPGNKNPAVLRYDPTGTRSAMSTTHEARDKLILQHASTHNVRFEWEGDAEKDILEDLEAKNLPPTPGRPFVWDFPSQSRVMRW 260
BLAST of NO18G02050 vs. NCBI_GenBank
Match: XP_008899285.1 (hypothetical protein PPTG_06980 [Phytophthora parasitica INRA-310] >ETN15776.1 hypothetical protein PPTG_06980 [Phytophthora parasitica INRA-310]) HSP 1 Score: 117.1 bits (292), Expect = 6.700e-23 Identity = 73/194 (37.63%), Postives = 103/194 (53.09%), Query Frame = 0 Query: 20 EVLNKLPVNMRTKLRSLALFRPDDINDLYPFPRNRISYPGVERIKGFRYPAPGSRGK-VNVPQSESDDRLYDIKYFDHDTRRRP-QEIYSWTPDFKRVAQAESPEPAKLMGSPGNKNPAVLAYDPTGLRSAMSATNQELQKALDKAMPDHQVQYAWQGD-EEAIIKKCEVNGLPVPPGKRAKFNIPVMSLQKRW 211 E N LP +R KLR + +F + P V +G+RYP+P + + V+VP S+S + +Y+I+Y+ D RR P P +AE P AK GSPGNKNPAVL YDPTG RSAMS T++ K + + H V++ W+GD E+ I++ E LP PG+ ++ P S RW Sbjct: 76 EYQNLLPAELRNKLRKMLVFTE------ATGTKQVNQSPAVS--QGYRYPSPDKQAEGVSVPSSDSKESIYNIQYYTRDIRRFPFPTEVGMHPSIPVEKRAEIPADAK-RGSPGNKNPAVLRYDPTGTRSAMSTTHEARDKLILQHASTHNVRFEWEGDAEKDILEDLEAKNLPPTPGRPFVWDFPSQSRVMRW 260
BLAST of NO18G02050 vs. NCBI_GenBank
Match: ETO84185.1 (hypothetical protein F444_01887 [Phytophthora parasitica P1976]) HSP 1 Score: 117.1 bits (292), Expect = 6.700e-23 Identity = 73/194 (37.63%), Postives = 103/194 (53.09%), Query Frame = 0 Query: 20 EVLNKLPVNMRTKLRSLALFRPDDINDLYPFPRNRISYPGVERIKGFRYPAPGSRGK-VNVPQSESDDRLYDIKYFDHDTRRRP-QEIYSWTPDFKRVAQAESPEPAKLMGSPGNKNPAVLAYDPTGLRSAMSATNQELQKALDKAMPDHQVQYAWQGD-EEAIIKKCEVNGLPVPPGKRAKFNIPVMSLQKRW 211 E N LP +R KLR + +F + P V +G+RYP+P + + V+VP S+S + +Y+I+Y+ D RR P P +AE P AK GSPGNKNPAVL YDPTG RSAMS T++ K + + H V++ W+GD E+ I++ E LP PG+ ++ P S RW Sbjct: 59 EYQNLLPAELRNKLRKMLVFTE------ATGTKQVNQSPAVS--QGYRYPSPDKQAEGVSVPSSDSKESIYNIQYYTRDIRRFPFPTEVGMHPSIPVEKRAEIPADAK-RGSPGNKNPAVLRYDPTGTRSAMSTTHEARDKLILQHASTHNVRFEWEGDAEKDILEDLEAKNLPPTPGRPFVWDFPSQSRVMRW 243 The following BLAST results are available for this feature:
BLAST of NO18G02050 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO18G02050 ID=NO18G02050|Name=NO18G02050|organism=Nannochloropsis oceanica|type=gene|length=3298bpback to top protein sequence of NO18G02050.1 >NO18G02050.1-protein ID=NO18G02050.1-protein|Name=NO18G02050.1|organism=Nannochloropsis oceanica|type=polypeptide|length=211bpback to top Synonyms
Publications
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