NO18G01960, NO18G01960 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO18G01960 vs. NCBI_GenBank
Match: XP_005853391.1 (translationally controlled tumor protein [Nannochloropsis gaditana CCMP526] >EKU22968.1 translationally controlled tumor protein [Nannochloropsis gaditana CCMP526] >EWM23400.1 Translationally controlled tumor protein [Nannochloropsis gaditana]) HSP 1 Score: 331.3 bits (848), Expect = 1.900e-87 Identity = 164/180 (91.11%), Postives = 170/180 (94.44%), Query Frame = 0 Query: 1 MIVYKDVISGDEVVSDALKITPVMEGGEEVPGLFEVDSAMVAVGGGDIDIGCGNAFGGAGDDEGADDATQKENNVSGPSSFAYTAMPFSSKGEFKSWVKDYVRNVRQALKGSGVAVEDIKKFMEEAPTFVKWLVDKYDDLEFFMSKSMNPDAGLIFSYYKEGAHCPTFVYVKSGYKVVKF 181 MIVYKDVISGDEVVSDALKI PV E GE+VPGLFEVDSAMVAVGGGDIDIGCGNAFGGAG+DEGADD QKENNVSG S F YTAMPFSSKGEFKSWVKDYVRNVRQALK +GVAVE+IKKFMEEAP FVKWLVDKYDDLEFFMSKSMNPDAGLIFSYYK+GAHCPTFVY+KSGYKVVKF Sbjct: 1 MIVYKDVISGDEVVSDALKIEPVKENGEDVPGLFEVDSAMVAVGGGDIDIGCGNAFGGAGEDEGADDNVQKENNVSGSSGFNYTAMPFSSKGEFKSWVKDYVRNVRQALKANGVAVEEIKKFMEEAPGFVKWLVDKYDDLEFFMSKSMNPDAGLIFSYYKDGAHCPTFVYIKSGYKVVKF 180
BLAST of NO18G01960 vs. NCBI_GenBank
Match: AFA52588.1 (hypothetical protein [Vaucheria litorea]) HSP 1 Score: 179.1 bits (453), Expect = 1.200e-41 Identity = 91/180 (50.56%), Postives = 125/180 (69.44%), Query Frame = 0 Query: 1 MIVYKDVISGDEVVSDALKITPVMEG-GEEVPGLFEVDSAMVAVGGGDIDIGCGNAFGGAGDDEGADDATQKENNVSGPSSFAYTAMPFSSKGEFKSWVKDYVRNVRQALKGSGVAVEDIKKFMEEAPTFVKWLVDKYDDLEFFMSKSMNPDAGLIFSYYKEGAHCPTFVYVKSGYKVVK 180 MIVY D+ISGDE+++DA KI PVM GE+V GLFEV+S ++ GG ++DIGCGN+FGG G DE DD+ +K NN+ SSF + PF S+ EFK ++K+YV+ VR ALK SG IK FM AP VK+L++ Y + +F+ S +P + F+YYKEGA P+FV++++G KV K Sbjct: 1 MIVYADLISGDEMMTDAFKIKPVMNSKGEKVEGLFEVESEIIVKGGDNVDIGCGNSFGGGGADEIVDDSVEKVNNII--SSFNLSECPFGSRNEFKEYLKEYVKKVRTALKDSGTPQPQIKAFMAIAPDMVKFLLENYKEYQFYTGSSYDPSGAMAFAYYKEGALTPSFVFIEAGLKVTK 178
BLAST of NO18G01960 vs. NCBI_GenBank
Match: CBJ29091.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 170.2 bits (430), Expect = 5.700e-39 Identity = 88/181 (48.62%), Postives = 121/181 (66.85%), Query Frame = 0 Query: 1 MIVYKDVISGDEVVSDALKITPVM-EGGEEVPGLFEVDSAMVAVGGGDIDIGCGNAFGGAGDDEGADDATQKENNVSGPSSFAYTAMPFSSKGEFKSWVKDYVRNVRQALKGSGVAVEDIKKFMEEAPTFVKWLVDKYDDLEFFMSKSMNPDAGLIFSYYKEGAHCPTFVYVKSGYKVVKF 181 MIVYKD+ISGDE+++DA PV+ GE V G+FEV+S+ G ++DIGCGNAFG G++E DD+ +K NNV P F YT +PF SK E K ++K+YVR+VR LK G +IK+FM +AP VK+L+ K+ D++ F +SM + G+ F YYK+GAH PTF Y+ + KF Sbjct: 1 MIVYKDLISGDEMMTDAFPQNPVVGNDGETVEGMFEVESSTAVKGSDNVDIGCGNAFG--GEEEVVDDSVEKVNNVIDP--FKYTEVPFGSKTELKDYLKEYVRSVRAKLKEKGTPQPEIKEFMAQAPGMVKFLLSKFADMQTFAGESMTAEGGMAFGYYKDGAHNPTFAYISKAMEAEKF 177
BLAST of NO18G01960 vs. NCBI_GenBank
Match: CCA28263.1 (conserved hypothetical protein [Albugo laibachii Nc14]) HSP 1 Score: 154.1 bits (388), Expect = 4.200e-34 Identity = 86/182 (47.25%), Postives = 121/182 (66.48%), Query Frame = 0 Query: 1 MIVYKDVISGDEVVSDALKITPVME-GGEEVPGLFEVDSAMVAVGGGDIDIGCGNAFGGAGDDEGADDATQKENNVSGPS-SFAYTAMPFSSKGEFKSWVKDYVRNVRQALKGSGVAVEDIKKFMEEAPTFVKWLVDKYDDLEFFMSKSMNPDAGLIFSYYKEGAHCPTFVYVKSGYKVVKF 181 M+V++D+ + DEVVSDA +I V + G+E+PG+ V S VA G +DIGCG+AF G+GD E DD+ + NN+S S F YT + F+SK E K+++K Y R + + LK S V E + F +EA VK+LV KYDDL+++M +S + +AGL FSYY +GA P F+Y+K G K VKF Sbjct: 1 MLVWQDIFTDDEVVSDANQIQLVKDVNGDEIPGMIMVQSRNVAKGSDSVDIGCGDAF-GSGDQE-VDDSVETVNNISDDSIGFGYTEISFASKTELKNYLKSYFRKIMKHLKTSEVTDEKLDSFKKEAQEIVKFLVAKYDDLQYYMFRSCDTEAGLSFSYYPDGATTPVFMYIKWGLKEVKF 180
BLAST of NO18G01960 vs. NCBI_GenBank
Match: XP_008911170.1 (hypothetical protein PPTG_15650 [Phytophthora parasitica INRA-310] >ETI38082.1 hypothetical protein F443_16095 [Phytophthora parasitica P1569] >ETK78302.1 hypothetical protein L915_15640 [Phytophthora parasitica] >ETL31732.1 hypothetical protein L916_15536 [Phytophthora parasitica] >ETL84960.1 hypothetical protein L917_15358 [Phytophthora parasitica] >ETM38129.1 hypothetical protein L914_15491 [Phytophthora parasitica] >ETN03397.1 hypothetical protein PPTG_15650 [Phytophthora parasitica INRA-310] >ETO66853.1 hypothetical protein F444_16080 [Phytophthora parasitica P1976] >ETP07967.1 hypothetical protein F441_15924 [Phytophthora parasitica CJ01A1] >ETP36012.1 hypothetical protein F442_15946 [Phytophthora parasitica P10297] >KUF95960.1 uncharacterized protein AM587_10010820 [Phytophthora nicotianae] >KUF96487.1 D-threonine aldolase [Phytophthora nicotianae]) HSP 1 Score: 151.4 bits (381), Expect = 2.700e-33 Identity = 81/182 (44.51%), Postives = 119/182 (65.38%), Query Frame = 0 Query: 1 MIVYKDVISGDEVVSDALKITPVME-GGEEVPGLFEVDSAMVAVGGGDIDIGCGNAFGGAGDDEGADDATQKENNVSGPS-SFAYTAMPFSSKGEFKSWVKDYVRNVRQALKGSGVAVEDIKKFMEEAPTFVKWLVDKYDDLEFFMSKSMNPDAGLIFSYYKEGAHCPTFVYVKSGYKVVKF 181 M+V++DV + DEV+SD+ K+ P + G EVPG+F+V+S VA G ++DIGCG+AFG G++E DD+ + NNV S F Y F +KGE K+++K Y R + LK +G + E + +F +A VK+LV + +L+F+M KS + +AGL ++YY EGA PTF Y+K G K VKF Sbjct: 1 MLVWQDVFTEDEVMSDSNKVLPCKDMEGNEVPGMFQVESKTVAKGSDNVDIGCGDAFG--GEEEQIDDSVETVNNVIDDSIGFGYIETGFDTKGELKTYLKSYFRKTMKHLKSTGASDETLTQFKSDAQEIVKFLVSMFKELQFYMFKSCDSEAGLAYAYYPEGALAPTFCYIKWGLKEVKF 180
BLAST of NO18G01960 vs. NCBI_GenBank
Match: CCI46588.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 147.5 bits (371), Expect = 4.000e-32 Identity = 85/182 (46.70%), Postives = 118/182 (64.84%), Query Frame = 0 Query: 1 MIVYKDVISGDEVVSDALKITPVMEG-GEEVPGLFEVDSAMVAVGGGDIDIGCGNAFGGAGDDEGADDATQKENNVSGPS-SFAYTAMPFSSKGEFKSWVKDYVRNVRQALKGSGVAVEDIKKFMEEAPTFVKWLVDKYDDLEFFMSKSMNPDAGLIFSYYKEGAHCPTFVYVKSGYKVVKF 181 M+V++D+ + DEVVSDA K PV + GEE+PGLF V S VAVG +DIGCG+AF G+GD E DD+ + NN+S S FAYT + F+SK E KS++K Y R + + + F +A VK+L+ KY+DL+++M +S + +AGL FSYY +GA P F+Y+K G K VKF Sbjct: 1 MLVWQDIFTNDEVVSDANKPEPVKDSEGEEIPGLFMVQSRNVAVGSDAVDIGCGDAF-GSGDQE-VDDSVETVNNISDASIGFAYTEITFASKTELKSYLKSYFRKLLNHPTLKEGDEDTVTVFKSDAQKIVKFLLAKYNDLQYYMFRSCDTEAGLSFSYYPDGATTPVFMYIKWGLKEVKF 180
BLAST of NO18G01960 vs. NCBI_GenBank
Match: OWZ05692.1 (hypothetical protein PHMEG_00022172 [Phytophthora megakarya]) HSP 1 Score: 146.7 bits (369), Expect = 6.800e-32 Identity = 77/182 (42.31%), Postives = 117/182 (64.29%), Query Frame = 0 Query: 1 MIVYKDVISGDEVVSDALKITPVME-GGEEVPGLFEVDSAMVAVGGGDIDIGCGNAFGGAGDDEGADDATQKENNVSGPS-SFAYTAMPFSSKGEFKSWVKDYVRNVRQALKGSGVAVEDIKKFMEEAPTFVKWLVDKYDDLEFFMSKSMNPDAGLIFSYYKEGAHCPTFVYVKSGYKVVKF 181 M+V++D+ + DEV+SD+ K+ P + G EV G+F+V+S VA G ++DIGCG+AFG G++E DD+ + NNV S F Y F +K E K+++K + R V + LK S + E + +F +A VK+LV + +L+F+M KS + +AG+ ++YY EGA PTF Y+K G K VKF Sbjct: 1 MLVWQDIFTEDEVMSDSFKVVPCKDLEGNEVSGMFQVESKTVAKGADNVDIGCGDAFG--GEEEAVDDSVETVNNVIDESVGFGYNETGFDTKAELKTYLKSFFRKVMKNLKSSDASDETLAQFKSDAQEIVKFLVSMFKELQFYMFKSFDSEAGMAYAYYPEGAIAPTFCYIKWGLKEVKF 180
BLAST of NO18G01960 vs. NCBI_GenBank
Match: POM79960.1 (Translationally-controlled tumor protein [Phytophthora palmivora var. palmivora]) HSP 1 Score: 146.0 bits (367), Expect = 1.200e-31 Identity = 78/182 (42.86%), Postives = 118/182 (64.84%), Query Frame = 0 Query: 1 MIVYKDVISGDEVVSDALKITPVME-GGEEVPGLFEVDSAMVAVGGGDIDIGCGNAFGGAGDDEGADDATQKENNVSGPS-SFAYTAMPFSSKGEFKSWVKDYVRNVRQALKGSGVAVEDIKKFMEEAPTFVKWLVDKYDDLEFFMSKSMNPDAGLIFSYYKEGAHCPTFVYVKSGYKVVKF 181 M+V++D+ + DEV+SD+ K+TP + G EV G+F+V+S VA G ++DIGCG+AFG G++E DD+ + NNV S F Y F +K E K+++K Y R V + LK + + E + +F +A VK+LV + +L+++M KS + +AGL ++YY EGA PTF Y+K G K VKF Sbjct: 1 MLVWQDIFTDDEVMSDSNKVTPCKDLEGNEVSGMFQVESKTVAKGADNVDIGCGDAFG--GEEEQLDDSVETVNNVIDESVGFGYMETGFDTKAELKTYLKSYFRKVMKHLKSTDASDETLAQFKSDAQEIVKFLVSMFKELQYYMFKSCDSEAGLAYAYYPEGAIAPTFCYIKWGLKEVKF 180
BLAST of NO18G01960 vs. NCBI_GenBank
Match: XP_002997577.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY68592.1 conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 145.6 bits (366), Expect = 1.500e-31 Identity = 78/182 (42.86%), Postives = 118/182 (64.84%), Query Frame = 0 Query: 1 MIVYKDVISGDEVVSDALKITPVME-GGEEVPGLFEVDSAMVAVGGGDIDIGCGNAFGGAGDDEGADDATQKENNVSGPS-SFAYTAMPFSSKGEFKSWVKDYVRNVRQALKGSGVAVEDIKKFMEEAPTFVKWLVDKYDDLEFFMSKSMNPDAGLIFSYYKEGAHCPTFVYVKSGYKVVKF 181 M+V++DV + DEV+SD+ K+ P + G EV G+F+V+S VA G ++DIGCG+AFG G++E DD+ + NNV S F Y F +K E K+++K + R + + LK +G + E + +F +A VK+LV + +L+F+M KS + +AGL ++YY EGA PTF Y+K G K VKF Sbjct: 1 MLVWQDVFTEDEVMSDSNKVVPCKDMEGNEVSGMFQVESKTVAKGSDNVDIGCGDAFG--GEEEQIDDSVETVNNVIDDSIGFGYIETGFDTKAELKTYLKSHFRKIMKHLKSTGASDETLAQFKSDAQEIVKFLVSMFKELQFYMFKSCDSEAGLAYAYYPEGAVAPTFCYIKWGLKEVKF 180
BLAST of NO18G01960 vs. NCBI_GenBank
Match: XP_009837085.1 (hypothetical protein H257_11761 [Aphanomyces astaci] >ETV73659.1 hypothetical protein H257_11761 [Aphanomyces astaci]) HSP 1 Score: 144.8 bits (364), Expect = 2.600e-31 Identity = 79/182 (43.41%), Postives = 117/182 (64.29%), Query Frame = 0 Query: 1 MIVYKDVISGDEVVSDALKITPVME-GGEEVPGLFEVDSAMVAVGGGDIDIGCGNAFGGAGDDEGADDATQKENNVSGPS-SFAYTAMPFSSKGEFKSWVKDYVRNVRQALKGSGVAVEDIKKFMEEAPTFVKWLVDKYDDLEFFMSKSMNPDAGLIFSYYKEGAHCPTFVYVKSGYKVVKF 181 M+V+ D+ + DEVVSD+ K+ + G +PG+ EV S V+ GG ++D+GCG+AFGG GD+E DD+ + NN+ S F YT F+SK + K+++K Y R + + LK + + E + F +A VK LV YDDL+++M +SM+ +AG+ FSYYKEG P F+Y+K G K VKF Sbjct: 1 MLVWMDIFTDDEVVSDSHKVYEAKDKEGNLIPGMLEVASKTVSKGGVNVDVGCGDAFGG-GDNE-VDDSVETVNNIIDESVGFGYTETGFNSKADLKTYLKSYFRKIIKHLKATNASDETLDSFKSDAQEIVKALVGLYDDLQYYMFRSMDSEAGMAFSYYKEGEATPVFLYIKWGLKEVKF 180 The following BLAST results are available for this feature:
BLAST of NO18G01960 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO18G01960 ID=NO18G01960|Name=NO18G01960|organism=Nannochloropsis oceanica|type=gene|length=2136bpback to top protein sequence of NO18G01960.1 >NO18G01960.1-protein ID=NO18G01960.1-protein|Name=NO18G01960.1|organism=Nannochloropsis oceanica|type=polypeptide|length=181bpback to top Synonyms
Publications
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