NO18G01850, NO18G01850 (gene) Nannochloropsis oceanica

Overview
NameNO18G01850
Unique NameNO18G01850
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2396
Alignment locationchr18:570938..573333 +

Link to JBrowse

Properties
Property NameValue
Descriptionvacuolar protein sorting 26B
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr18genomechr18:570938..573333 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR028934Vps26-related
Homology
BLAST of NO18G01850 vs. NCBI_GenBank
Match: EWM23387.1 (Vacuolar protein sorting-associated protein 26 [Nannochloropsis gaditana])

HSP 1 Score: 495.0 bits (1273), Expect = 1.500e-136
Identity = 244/272 (89.71%), Postives = 260/272 (95.59%), Query Frame = 0
Query:    1 MSSGKGTTHLLPIYQTHEGVSGTMEIVLAPGKKLEHLGIKIELVGAIEMLNDRTSTYEFTSLVKELETAGVLYSDKQYSFDFATVDKPYDSYTGLNVRLRYFLKVTVTRQYAPNILAEQELVVQSTAEPPPSQSSIKMEVGIEDCLHIEFEYDKQKYHLKDVILGKIYFLLVRIKIKHMELAIIRRESAGTGSNVTNESETLCKFEVMDGAPVKGECIPLRLFLSSIDLTPTYRSVNNRFSVRYYLNLVLVDEEDRRYFKQQEVVFYNKDLG 273
            MSSG+GTTHLLP+YQ HEGV G +E++LAPGKKLEHLGIKIELVGAIEML DR S +EFT+LVKEL+TAGVL+SDKQY+FDFATVDKPYDSYTGLNVRLRYFLKVTVTRQYAPN++AEQELVVQST + P S SSIKMEVGIEDCLHIEFEYDKQKYHLKDVILGKIYFLLVRIKIKHMELAIIRRESAGTG+NV NESETLCKFEVMDGAPVKGECIPLRLFLSSI LTPTYRSVNNRFSVRYYLNLVLVDEEDRRYFKQQEV+FYNK+LG
Sbjct:   30 MSSGRGTTHLLPLYQAHEGVGGIVEVILAPGKKLEHLGIKIELVGAIEMLQDRGSVHEFTNLVKELDTAGVLFSDKQYTFDFATVDKPYDSYTGLNVRLRYFLKVTVTRQYAPNLVAEQELVVQSTTQVPESHSSIKMEVGIEDCLHIEFEYDKQKYHLKDVILGKIYFLLVRIKIKHMELAIIRRESAGTGANVMNESETLCKFEVMDGAPVKGECIPLRLFLSSIALTPTYRSVNNRFSVRYYLNLVLVDEEDRRYFKQQEVIFYNKELG 301          
BLAST of NO18G01850 vs. NCBI_GenBank
Match: OAE33056.1 (hypothetical protein AXG93_1913s1580 [Marchantia polymorpha subsp. ruderalis])

HSP 1 Score: 347.8 bits (891), Expect = 3.000e-92
Identity = 167/260 (64.23%), Postives = 208/260 (80.00%), Query Frame = 0
Query:   11 LPIYQTHEGVSGTMEIVLAPGKKLEHLGIKIELVGAIEMLNDRTSTYEFTSLVKELETAGVLYSDKQYSFDFATVDKPYDSYTGLNVRLRYFLKVTVTRQYAPNILAEQELVVQSTAEPPPSQSSIKMEVGIEDCLHIEFEYDKQKYHLKDVILGKIYFLLVRIKIKHMELAIIRRESAGTGSNVTNESETLCKFEVMDGAPVKGECIPLRLFLSSIDLTPTYRSVNNRFSVRYYLNLVLVDEEDRRYFKQQEVVFYNKD 271
            +P++Q+ E V G + I   PGKK+EH+G+KIEL+G IE+  DR S Y+FTSLV+EL+  G +   K + F+F+TV+ PY+SY G+NVRLRY LKVT++R YA NI+  ++  V++ + PP   +SIKMEVGIEDCLHIEFEY K KYHLKDVI+GKIYFLLVRIKIKHMEL I RRES G+G N  NE+ETL K+E+MDGAPV+GE IP+RLFLS  DLTPTYR++NN+FSV+YYLNLVLVDEEDRRYFKQQE+     D
Sbjct:   24 VPLFQSQESVVGEVRIEPLPGKKVEHMGVKIELLGQIELYFDRGSFYDFTSLVRELDVPGEIVDRKTFPFEFSTVEMPYESYNGVNVRLRYILKVTISRSYATNIVEYKDFWVRNFSPPPEINNSIKMEVGIEDCLHIEFEYSKSKYHLKDVIIGKIYFLLVRIKIKHMELEIRRRESTGSGPNTYNETETLAKYEIMDGAPVRGESIPIRLFLSPYDLTPTYRNINNKFSVKYYLNLVLVDEEDRRYFKQQEITMMRID 283          
BLAST of NO18G01850 vs. NCBI_GenBank
Match: PTQ42520.1 (hypothetical protein MARPO_0029s0053 [Marchantia polymorpha])

HSP 1 Score: 347.8 bits (891), Expect = 3.000e-92
Identity = 167/260 (64.23%), Postives = 208/260 (80.00%), Query Frame = 0
Query:   11 LPIYQTHEGVSGTMEIVLAPGKKLEHLGIKIELVGAIEMLNDRTSTYEFTSLVKELETAGVLYSDKQYSFDFATVDKPYDSYTGLNVRLRYFLKVTVTRQYAPNILAEQELVVQSTAEPPPSQSSIKMEVGIEDCLHIEFEYDKQKYHLKDVILGKIYFLLVRIKIKHMELAIIRRESAGTGSNVTNESETLCKFEVMDGAPVKGECIPLRLFLSSIDLTPTYRSVNNRFSVRYYLNLVLVDEEDRRYFKQQEVVFYNKD 271
            +P++Q+ E V G + I   PGKK+EH+G+KIEL+G IE+  DR S Y+FTSLV+EL+  G +   K + F+F+TV+ PY+SY G+NVRLRY LKVT++R YA NI+  ++  V++ + PP   +SIKMEVGIEDCLHIEFEY K KYHLKDVI+GKIYFLLVRIKIKHMEL I RRES G+G N  NE+ETL K+E+MDGAPV+GE IP+RLFLS  DLTPTYR++NN+FSV+YYLNLVLVDEEDRRYFKQQE+     D
Sbjct:   39 VPLFQSQESVVGEVRIEPLPGKKVEHMGVKIELLGQIELYFDRGSFYDFTSLVRELDVPGEIVDRKTFPFEFSTVEMPYESYNGVNVRLRYILKVTISRSYATNIVEYKDFWVRNFSPPPEINNSIKMEVGIEDCLHIEFEYSKSKYHLKDVIIGKIYFLLVRIKIKHMELEIRRRESTGSGPNTYNETETLAKYEIMDGAPVRGESIPIRLFLSPYDLTPTYRNINNKFSVKYYLNLVLVDEEDRRYFKQQEITMMRID 298          
BLAST of NO18G01850 vs. NCBI_GenBank
Match: CBN73818.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 347.1 bits (889), Expect = 5.100e-92
Identity = 167/259 (64.48%), Postives = 211/259 (81.47%), Query Frame = 0
Query:   11 LPIYQTHEGVSGTMEIVLAPGKKLEHLGIKIELVGAIEMLNDRTSTYEFTSLVKELETAGVLYSDKQYSFDFATVDKPYDSYTGLNVRLRYFLKVTVTRQYAPNILAEQELVVQSTAEPPPSQSSIKMEVGIEDCLHIEFEYDKQKYHLKDVILGKIYFLLVRIKIKHMELAIIRRESAGTGSNVTNESETLCKFEVMDGAPVKGECIPLRLFLSSIDLTPTYRSVNNRFSVRYYLNLVLVDEEDRRYFKQQEVVFYNK 270
            LPI++  E VSGT  +++APGKK++HLGIK EL+G IE+  DR + YEF+S+V+EL+TAG L  ++QY FDF   +KPY+SY+GLNVRLRYF++VT++ +   N+  E + VVQ+  + P +  S+KMEVGIEDCLHIEFEYDK  YHL+DV++GKIYFLLVRIKIKHME+AIIRRE+AGTGSN  NESET+ K+EVMDGAP KGEC+PLR+FL    LTPTYR   N+F+V+Y+LNLVLVDEEDRRYFKQQEV  + K
Sbjct:   39 LPIFEGSEAVSGTATVLVAPGKKVDHLGIKAELIGQIELYYDRGNHYEFSSVVRELDTAGALVGNRQYRFDFNLAEKPYESYSGLNVRLRYFVRVTISTR-GKNVTKEMDFVVQNIQQEPEALDSLKMEVGIEDCLHIEFEYDKSAYHLQDVVIGKIYFLLVRIKIKHMEMAIIRRETAGTGSNQYNESETIIKYEVMDGAPAKGECVPLRVFLKPYALTPTYRG-TNKFTVKYFLNLVLVDEEDRRYFKQQEVTLWRK 295          
BLAST of NO18G01850 vs. NCBI_GenBank
Match: XP_002532583.1 (PREDICTED: vacuolar protein sorting-associated protein 26A [Ricinus communis] >EEF29800.1 vacuolar protein sorting 26, vps26, putative [Ricinus communis])

HSP 1 Score: 346.3 bits (887), Expect = 8.800e-92
Identity = 170/262 (64.89%), Postives = 208/262 (79.39%), Query Frame = 0
Query:    6 GTTHLLPIYQTHEGVSGTMEIVLAPGKKLEHLGIKIELVGAIEMLNDRTSTYEFTSLVKELETAGVLYSDKQYSFDFATVDKPYDSYTGLNVRLRYFLKVTVTRQYAPNILAEQELVVQSTAEPPPSQSSIKMEVGIEDCLHIEFEYDKQKYHLKDVILGKIYFLLVRIKIKHMELAIIRRESAGTGSNVTNESETLCKFEVMDGAPVKGECIPLRLFLSSIDLTPTYRSVNNRFSVRYYLNLVLVDEEDRRYFKQQEVVFY 268
            G + L+P++Q+ E + G + +    GKKLEH GIKIEL+G IE+  DR + Y+FTSLV+EL+  G LY  K Y F+F+TV+ PY+SY G+NVRLRY LKVTV+R Y  NI+  Q+ VV++ + PP   +SIKMEVGIEDCLHIEFEY K KYHLKDVI+GKIYFLLVRIKIK+MEL I RRES G+G N   E+ETL KFE+MDGAPV+GE IP RLFLS  +LTPTYR++NN+FSV+YYLNLVLVDEEDRRYFKQQE+  Y
Sbjct:   34 GQSVLVPLFQSQENIVGEVAVEPLQGKKLEHTGIKIELLGQIELYFDRGNFYDFTSLVRELDIPGELYERKTYPFEFSTVEMPYESYNGVNVRLRYILKVTVSRNYVSNIVEYQDFVVRNYSPPPSVNNSIKMEVGIEDCLHIEFEYSKSKYHLKDVIVGKIYFLLVRIKIKNMELEIRRRESTGSGPNTYVETETLAKFELMDGAPVRGESIPTRLFLSPYELTPTYRNINNKFSVKYYLNLVLVDEEDRRYFKQQEITIY 295          
BLAST of NO18G01850 vs. NCBI_GenBank
Match: PIN21405.1 (Membrane coat complex Retromer, subunit VPS26 [Handroanthus impetiginosus])

HSP 1 Score: 346.3 bits (887), Expect = 8.800e-92
Identity = 166/262 (63.36%), Postives = 213/262 (81.30%), Query Frame = 0
Query:    6 GTTHLLPIYQTHEGVSGTMEIVLAPGKKLEHLGIKIELVGAIEMLNDRTSTYEFTSLVKELETAGVLYSDKQYSFDFATVDKPYDSYTGLNVRLRYFLKVTVTRQYAPNILAEQELVVQSTAEPPPSQSSIKMEVGIEDCLHIEFEYDKQKYHLKDVILGKIYFLLVRIKIKHMELAIIRRESAGTGSNVTNESETLCKFEVMDGAPVKGECIPLRLFLSSIDLTPTYRSVNNRFSVRYYLNLVLVDEEDRRYFKQQEVVFY 268
            G T ++P++Q+ E +SG + +    GKK+EH GIK+EL+G IEM  DR + Y+FTSLV+EL+  G +Y  K + F+F+TV+ PY++Y+G+NVRLRY LKVT++R YA +I+  Q+ VVQ+ + PP   +SIKMEVGIEDCLHIEFEY+K KYHLKDVI+GKIYFLLVRIKIK+M+L I RRES G+G N   E+ETL KFE+MDGAPV+GE IP+RLFLS  +LTPTYR++NN+FSV+YYLNLVLVDEEDRRYFKQQE+  Y
Sbjct:   34 GQTVMVPLFQSQENISGKISVEPVSGKKVEHNGIKVELLGQIEMYFDRGNFYDFTSLVRELDVPGEIYERKTFPFEFSTVEMPYETYSGVNVRLRYVLKVTISRGYAGSIVEYQDFVVQNYSPPPQINNSIKMEVGIEDCLHIEFEYNKSKYHLKDVIIGKIYFLLVRIKIKNMDLEIRRRESTGSGPNTHVETETLAKFELMDGAPVRGESIPIRLFLSPYELTPTYRNINNKFSVKYYLNLVLVDEEDRRYFKQQEITMY 295          
BLAST of NO18G01850 vs. NCBI_GenBank
Match: XP_020574227.1 (vacuolar protein sorting-associated protein 26B-like [Phalaenopsis equestris] >XP_020574228.1 vacuolar protein sorting-associated protein 26B-like [Phalaenopsis equestris])

HSP 1 Score: 345.9 bits (886), Expect = 1.100e-91
Identity = 166/262 (63.36%), Postives = 211/262 (80.53%), Query Frame = 0
Query:    6 GTTHLLPIYQTHEGVSGTMEIVLAPGKKLEHLGIKIELVGAIEMLNDRTSTYEFTSLVKELETAGVLYSDKQYSFDFATVDKPYDSYTGLNVRLRYFLKVTVTRQYAPNILAEQELVVQSTAEPPPSQSSIKMEVGIEDCLHIEFEYDKQKYHLKDVILGKIYFLLVRIKIKHMELAIIRRESAGTGSNVTNESETLCKFEVMDGAPVKGECIPLRLFLSSIDLTPTYRSVNNRFSVRYYLNLVLVDEEDRRYFKQQEVVFY 268
            G T ++P++Q+ E +SG + I    GKK+EH+G+K+EL+G IE+  DR + Y+FTSLV+EL+  G +Y  K Y F+F+TV+ PY+SY G+NVRLRY LKVTV+R Y  NI+  QE  V++ + PP   +SIKMEVGIEDCLHIEFEY+K KYHLKDVI+GKIYFLLVRIKIK+MEL I RRES G+G N   E+ETL KFE+MDGAPV+GE IP+RLFLS  +LTPTYR++NN++SV+Y+LNLVLVDEEDRRYFKQQE+  Y
Sbjct:   34 GQTTMVPLFQSQETISGEVSIEPFHGKKVEHIGVKVELLGQIELYFDRGNFYDFTSLVRELDVPGEIYERKAYPFEFSTVEMPYESYNGVNVRLRYILKVTVSRNYVSNIVEYQEFCVRNYSTPPTINNSIKMEVGIEDCLHIEFEYNKSKYHLKDVIIGKIYFLLVRIKIKNMELEIRRRESTGSGPNTYVETETLAKFELMDGAPVRGESIPIRLFLSPYELTPTYRNINNKYSVKYFLNLVLVDEEDRRYFKQQEITVY 295          
BLAST of NO18G01850 vs. NCBI_GenBank
Match: ONK81855.1 (uncharacterized protein A4U43_C01F33560 [Asparagus officinalis])

HSP 1 Score: 345.1 bits (884), Expect = 2.000e-91
Identity = 169/267 (63.30%), Postives = 209/267 (78.28%), Query Frame = 0
Query:    1 MSSGKGTTHLLPIYQTHEGVSGTMEIVLAPGKKLEHLGIKIELVGAIEMLNDRTSTYEFTSLVKELETAGVLYSDKQYSFDFATVDKPYDSYTGLNVRLRYFLKVTVTRQYAPNILAEQELVVQSTAEPPPSQSSIKMEVGIEDCLHIEFEYDKQKYHLKDVILGKIYFLLVRIKIKHMELAIIRRESAGTGSNVTNESETLCKFEVMDGAPVKGECIPLRLFLSSIDLTPTYRSVNNRFSVRYYLNLVLVDEEDRRYFKQQEVVFY 268
            M    G T L+P++Q+ E ++G + I    GKK+EH G+KIEL+G IE+  DR + Y+FTSLV+ELE  G LY  K Y F+F+TV+ PY+SY G+NVRLRY LKVTV+R    NI+A Q+  V++    P   +SIKMEVGIEDCLHIEFEY+K KYHLKD+I+GKIYFLLVRIKIK+MEL I RRES G+G N   E+ETL KFE+MDGAPV+GE IP+RLFLS  +LTPTYR++NN+FSV+YYLNLVLVDEEDRRYFKQQE+  Y
Sbjct: 1021 MKMDNGKTALVPLFQSQENIAGEVSIEPVHGKKVEHTGVKIELLGQIELYFDRGNFYDFTSLVRELEVPGELYERKTYQFEFSTVEMPYESYNGVNVRLRYVLKVTVSRSVFSNIVAYQDFCVRNYTPVPTINNSIKMEVGIEDCLHIEFEYNKSKYHLKDIIIGKIYFLLVRIKIKNMELEIRRRESTGSGPNTYVETETLAKFELMDGAPVRGESIPIRLFLSPYELTPTYRNINNKFSVKYYLNLVLVDEEDRRYFKQQEITMY 1287          
BLAST of NO18G01850 vs. NCBI_GenBank
Match: XP_020262440.1 (vacuolar protein sorting-associated protein 26A-like [Asparagus officinalis])

HSP 1 Score: 345.1 bits (884), Expect = 2.000e-91
Identity = 169/267 (63.30%), Postives = 209/267 (78.28%), Query Frame = 0
Query:    1 MSSGKGTTHLLPIYQTHEGVSGTMEIVLAPGKKLEHLGIKIELVGAIEMLNDRTSTYEFTSLVKELETAGVLYSDKQYSFDFATVDKPYDSYTGLNVRLRYFLKVTVTRQYAPNILAEQELVVQSTAEPPPSQSSIKMEVGIEDCLHIEFEYDKQKYHLKDVILGKIYFLLVRIKIKHMELAIIRRESAGTGSNVTNESETLCKFEVMDGAPVKGECIPLRLFLSSIDLTPTYRSVNNRFSVRYYLNLVLVDEEDRRYFKQQEVVFY 268
            M    G T L+P++Q+ E ++G + I    GKK+EH G+KIEL+G IE+  DR + Y+FTSLV+ELE  G LY  K Y F+F+TV+ PY+SY G+NVRLRY LKVTV+R    NI+A Q+  V++    P   +SIKMEVGIEDCLHIEFEY+K KYHLKD+I+GKIYFLLVRIKIK+MEL I RRES G+G N   E+ETL KFE+MDGAPV+GE IP+RLFLS  +LTPTYR++NN+FSV+YYLNLVLVDEEDRRYFKQQE+  Y
Sbjct:   29 MKMDNGKTALVPLFQSQENIAGEVSIEPVHGKKVEHTGVKIELLGQIELYFDRGNFYDFTSLVRELEVPGELYERKTYQFEFSTVEMPYESYNGVNVRLRYVLKVTVSRSVFSNIVAYQDFCVRNYTPVPTINNSIKMEVGIEDCLHIEFEYNKSKYHLKDIIIGKIYFLLVRIKIKNMELEIRRRESTGSGPNTYVETETLAKFELMDGAPVRGESIPIRLFLSPYELTPTYRNINNKFSVKYYLNLVLVDEEDRRYFKQQEITMY 295          
BLAST of NO18G01850 vs. NCBI_GenBank
Match: XP_011017559.1 (PREDICTED: vacuolar protein sorting-associated protein 26B-like isoform X1 [Populus euphratica])

HSP 1 Score: 344.4 bits (882), Expect = 3.300e-91
Identity = 164/267 (61.42%), Postives = 213/267 (79.78%), Query Frame = 0
Query:    1 MSSGKGTTHLLPIYQTHEGVSGTMEIVLAPGKKLEHLGIKIELVGAIEMLNDRTSTYEFTSLVKELETAGVLYSDKQYSFDFATVDKPYDSYTGLNVRLRYFLKVTVTRQYAPNILAEQELVVQSTAEPPPSQSSIKMEVGIEDCLHIEFEYDKQKYHLKDVILGKIYFLLVRIKIKHMELAIIRRESAGTGSNVTNESETLCKFEVMDGAPVKGECIPLRLFLSSIDLTPTYRSVNNRFSVRYYLNLVLVDEEDRRYFKQQEVVFY 268
            M    G T ++P+  + E ++G + I    GKK++H+G+K+EL+G IEM  DR++ Y+F SLV+EL+  G +Y  K Y F+F+TV+ PY++Y G+NVRLRY LKVTVTR YA +I+  Q+ +V + + PPP  +SIKMEVGIEDCLHIEFEY+K KYHLKDVI+GKIYFLLVRIKIK+M+L I RRES G+G+N   E+ETL KFE+MDGAPV+GE IP+RLFLS  +LTPT+R++NN+FSV+YYLNLVLVDEEDRRYFKQQE+  Y
Sbjct:   29 MKKENGQTLMVPLCHSQENIAGKISIEPLQGKKVDHIGVKVELLGQIEMYFDRSNFYDFASLVRELDVPGEIYERKTYPFEFSTVEMPYETYNGVNVRLRYVLKVTVTRGYAGSIIEYQDFMVSNYSPPPPINNSIKMEVGIEDCLHIEFEYNKSKYHLKDVIIGKIYFLLVRIKIKNMDLEIRRRESTGSGANTYVETETLAKFELMDGAPVRGESIPIRLFLSPYELTPTHRNINNKFSVKYYLNLVLVDEEDRRYFKQQEITIY 295          
The following BLAST results are available for this feature:
BLAST of NO18G01850 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM23387.11.500e-13689.71Vacuolar protein sorting-associated protein 26 [Na... [more]
OAE33056.13.000e-9264.23hypothetical protein AXG93_1913s1580 [Marchantia p... [more]
PTQ42520.13.000e-9264.23hypothetical protein MARPO_0029s0053 [Marchantia p... [more]
CBN73818.15.100e-9264.48conserved unknown protein [Ectocarpus siliculosus][more]
XP_002532583.18.800e-9264.89PREDICTED: vacuolar protein sorting-associated pro... [more]
PIN21405.18.800e-9263.36Membrane coat complex Retromer, subunit VPS26 [Han... [more]
XP_020574227.11.100e-9163.36vacuolar protein sorting-associated protein 26B-li... [more]
ONK81855.12.000e-9163.30uncharacterized protein A4U43_C01F33560 [Asparagus... [more]
XP_020262440.12.000e-9163.30vacuolar protein sorting-associated protein 26A-li... [more]
XP_011017559.13.300e-9161.42PREDICTED: vacuolar protein sorting-associated pro... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL008nonsL008Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR046ncniR046Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR043ngnoR043Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK004038NSK004038Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO18G01850.1NO18G01850.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO18G01850.2NO18G01850.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|604338gene_8872Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100189g6gene7065Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO18G01850.1NO18G01850.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO18G01850.2NO18G01850.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO18G01850 ID=NO18G01850|Name=NO18G01850|organism=Nannochloropsis oceanica|type=gene|length=2396bp
CTAGACATGCTTTCGGGCTGTCTGGGGCGGGTGTATTGGGAGGGGATGAC
CGAGTGAGGAAATAAAAATATCATGGAGCCGGGGAAAGCAGGCGTCATCA
AGTCTGTGTTGCTTCCATGCGGCATATTTACATTTACCACGCCACAAACC
GTCCAAACATGCATTATGTGGGGCACATGTATACCGCGCTGTGCATTTTT
ACCTCTTGCAGTACGGGATTGTGGTCATCACTCGTTTGTAATGGACATCA
GATCCCAGGGTGCTGTCGCATTAGCGAGAGAGGTTTTTCTTCCTTCCTTT
CTTCCTTTATTCCCATCTGCCGCACTAACCACGTCTCTTTTTCTACACCA
CCACCAGCAAAAGATAGCAGCAGCGGCAGCAGCAGCAACAACAAAACAAC
AATAACAGCAACAGTAATAGGTGCTGGAGCCCGTGAAGCTGCGGCATTTC
TTCCCTTGCTGTAGGTTGGGGCGGCTAGAGCTAGCGGGAGGCAGGCGCAT
ACCAACGACAGACGTAGCACCATGGTAAGTCCGTCGATACTCTTGTCCTT
CACAGTATTTTAAGTCGTGCACATTGAACATATAAAGATATCCTAGGCAC
GTCCCGGTGCCCTGACTTTTGGCACGTTGTTAGACACCAAAATGGTCCCT
CAGTCTCTCATCATCAGTCCAGGCCCGACCATCATAACCCCTCCTTTCCC
TCCCCCCCCCGGCCCGCGCTTCTTTCCTTCTCCTTCTATCCACTCCCTCC
CCTCTCTCTTGTCCTCCCTAGTCCCTCTTCGGCAGCCTCGTCAGCGGGCC
CCAAGCTAGGGTCAACATTAAACTCACCGGCGTCGATTCGCGCTTGAAAA
AAGAAATGAGCAGCGGCAAAGGTACCACGCACCTCCTCCCTATCTATCAG
ACCCACGAGGGTGTGAGTGGAACGATGGAAATTGTTTTAGCACCGGGAAA
GAAATTGGAGCACCTGGGAATCAAGATTGAGTTAGTGGGGGCGATCGAGg
taaggagggaggtagggagggagggaagaagagaggaaagcgtgcttgaa
gataatttgtgattcaggactgaccatccatcgctccttcccccagATGT
TGAATGATCGCACGTCTACCTACGAGTTCACCAGCCTGGTAAAAGAGCTC
GAAACGGCCGGTGTCCTCTATTCGGACAAGCAATACTCGTTCGACTTCGC
CACTGTCGACAAGCCCTACGACTCATACACTGGCCTCAACGTCCGCCTGC
GTTACTTTTTGAAAGTGACGGTGACACGACAGTACGCCCCCAATATATTG
GCAGAACAAGAGCTCGTCGTGCAATCCACCGCGGAGCCCCCCCCTTCTCA
GTCCAGTATCAAGATGGAGgtacgtttccttcttttcctgcttccatccc
ttccttccttactccaacctgtcgtgcgtcacaatcgctcttcatggaat
ggtttataagctgtcttattgatttctgtgtgtggacttgtttctggcta
tgttcgtcgacccacccttccctccttccctccttcgcacccctccagGT
GGGTATCGAAGACTGCCTGCACATCGAGTTTGAGTACGACAAACAAAAGT
ACCACCTCAAAGATGTCATTCTTGgtacgcatcttcctccctcactctct
tcccgcttcctcctctccctctgtgtcccccaggccactggtctcttgtc
ctttttggacgttctcaccgaacttgggtccaccctccctctctccctcc
cttcttccattccctccgccctcacttagGCAAAATTTATTTCCTCCTCG
TCCGAATTAAAATCAAGCACATGGAGCTGGCCATCATTCGCCGGGAAAGT
GCCGGGACGGGCTCGAATGTAACGAACGAAAGTGAGACGTTGTGTAAATT
CGAGGTGATGGACGGTGCGCCCGTGAAGGGGGAGTGTATTCCCCTACGGT
TGTTTTTGTCGTCCATTGACTTGACCCCCACATATCGAAGCGTGAACAAC
CGTTTTTCGGTCCGATATTACTTGAATTTGGTGTTGGTAGATGAGGAGGA
TCGCCGGTACTTCAAGCAGCAGGAGGTGGTATTTTACAATAAGGACCTCG
GGTAGTGGAGTGCGTAGTAGGACGTGGATCGACCTTTCTTATCCTCCTTT
CCCTCCCCCGCTGTAGGTTATTCTTATTTCGATCAGTGGTAAATGATAGA
AGGAATGATTATATTGCTCCTTCGACGAATGAGGCGAGAATGCGGGGGGA
AGAGAGGGAGAGAGAGGGAGGAGGAAGCAGGTAGTTTGTTGATATTAGGG
TGAGAAGGACGACGCCAAAGAGGAGGGAAGAACATATGAGCAGCTTTACC
AGCAGCAGCGGCAATAACAAAGCAAAAAGGACACTGGAAACCGTTT
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protein sequence of NO18G01850.1

>NO18G01850.1-protein ID=NO18G01850.1-protein|Name=NO18G01850.1|organism=Nannochloropsis oceanica|type=polypeptide|length=302bp
MSLFGSLVSGPQARVNIKLTGVDSRLKKEMSSGKGTTHLLPIYQTHEGVS
GTMEIVLAPGKKLEHLGIKIELVGAIEMLNDRTSTYEFTSLVKELETAGV
LYSDKQYSFDFATVDKPYDSYTGLNVRLRYFLKVTVTRQYAPNILAEQEL
VVQSTAEPPPSQSSIKMEVGIEDCLHIEFEYDKQKYHLKDVILGKIYFLL
VRIKIKHMELAIIRRESAGTGSNVTNESETLCKFEVMDGAPVKGECIPLR
LFLSSIDLTPTYRSVNNRFSVRYYLNLVLVDEEDRRYFKQQEVVFYNKDL
G*
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protein sequence of NO18G01850.2

>NO18G01850.2-protein ID=NO18G01850.2-protein|Name=NO18G01850.2|organism=Nannochloropsis oceanica|type=polypeptide|length=273bp
MSSGKGTTHLLPIYQTHEGVSGTMEIVLAPGKKLEHLGIKIELVGAIEML
NDRTSTYEFTSLVKELETAGVLYSDKQYSFDFATVDKPYDSYTGLNVRLR
YFLKVTVTRQYAPNILAEQELVVQSTAEPPPSQSSIKMEVGIEDCLHIEF
EYDKQKYHLKDVILGKIYFLLVRIKIKHMELAIIRRESAGTGSNVTNESE
TLCKFEVMDGAPVKGECIPLRLFLSSIDLTPTYRSVNNRFSVRYYLNLVL
VDEEDRRYFKQQEVVFYNKDLG*
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Synonyms
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