NO18G01850, NO18G01850 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO18G01850 vs. NCBI_GenBank
Match: EWM23387.1 (Vacuolar protein sorting-associated protein 26 [Nannochloropsis gaditana]) HSP 1 Score: 495.0 bits (1273), Expect = 1.500e-136 Identity = 244/272 (89.71%), Postives = 260/272 (95.59%), Query Frame = 0
Query: 1 MSSGKGTTHLLPIYQTHEGVSGTMEIVLAPGKKLEHLGIKIELVGAIEMLNDRTSTYEFTSLVKELETAGVLYSDKQYSFDFATVDKPYDSYTGLNVRLRYFLKVTVTRQYAPNILAEQELVVQSTAEPPPSQSSIKMEVGIEDCLHIEFEYDKQKYHLKDVILGKIYFLLVRIKIKHMELAIIRRESAGTGSNVTNESETLCKFEVMDGAPVKGECIPLRLFLSSIDLTPTYRSVNNRFSVRYYLNLVLVDEEDRRYFKQQEVVFYNKDLG 273
MSSG+GTTHLLP+YQ HEGV G +E++LAPGKKLEHLGIKIELVGAIEML DR S +EFT+LVKEL+TAGVL+SDKQY+FDFATVDKPYDSYTGLNVRLRYFLKVTVTRQYAPN++AEQELVVQST + P S SSIKMEVGIEDCLHIEFEYDKQKYHLKDVILGKIYFLLVRIKIKHMELAIIRRESAGTG+NV NESETLCKFEVMDGAPVKGECIPLRLFLSSI LTPTYRSVNNRFSVRYYLNLVLVDEEDRRYFKQQEV+FYNK+LG
Sbjct: 30 MSSGRGTTHLLPLYQAHEGVGGIVEVILAPGKKLEHLGIKIELVGAIEMLQDRGSVHEFTNLVKELDTAGVLFSDKQYTFDFATVDKPYDSYTGLNVRLRYFLKVTVTRQYAPNLVAEQELVVQSTTQVPESHSSIKMEVGIEDCLHIEFEYDKQKYHLKDVILGKIYFLLVRIKIKHMELAIIRRESAGTGANVMNESETLCKFEVMDGAPVKGECIPLRLFLSSIALTPTYRSVNNRFSVRYYLNLVLVDEEDRRYFKQQEVIFYNKELG 301
BLAST of NO18G01850 vs. NCBI_GenBank
Match: OAE33056.1 (hypothetical protein AXG93_1913s1580 [Marchantia polymorpha subsp. ruderalis]) HSP 1 Score: 347.8 bits (891), Expect = 3.000e-92 Identity = 167/260 (64.23%), Postives = 208/260 (80.00%), Query Frame = 0
Query: 11 LPIYQTHEGVSGTMEIVLAPGKKLEHLGIKIELVGAIEMLNDRTSTYEFTSLVKELETAGVLYSDKQYSFDFATVDKPYDSYTGLNVRLRYFLKVTVTRQYAPNILAEQELVVQSTAEPPPSQSSIKMEVGIEDCLHIEFEYDKQKYHLKDVILGKIYFLLVRIKIKHMELAIIRRESAGTGSNVTNESETLCKFEVMDGAPVKGECIPLRLFLSSIDLTPTYRSVNNRFSVRYYLNLVLVDEEDRRYFKQQEVVFYNKD 271
+P++Q+ E V G + I PGKK+EH+G+KIEL+G IE+ DR S Y+FTSLV+EL+ G + K + F+F+TV+ PY+SY G+NVRLRY LKVT++R YA NI+ ++ V++ + PP +SIKMEVGIEDCLHIEFEY K KYHLKDVI+GKIYFLLVRIKIKHMEL I RRES G+G N NE+ETL K+E+MDGAPV+GE IP+RLFLS DLTPTYR++NN+FSV+YYLNLVLVDEEDRRYFKQQE+ D
Sbjct: 24 VPLFQSQESVVGEVRIEPLPGKKVEHMGVKIELLGQIELYFDRGSFYDFTSLVRELDVPGEIVDRKTFPFEFSTVEMPYESYNGVNVRLRYILKVTISRSYATNIVEYKDFWVRNFSPPPEINNSIKMEVGIEDCLHIEFEYSKSKYHLKDVIIGKIYFLLVRIKIKHMELEIRRRESTGSGPNTYNETETLAKYEIMDGAPVRGESIPIRLFLSPYDLTPTYRNINNKFSVKYYLNLVLVDEEDRRYFKQQEITMMRID 283
BLAST of NO18G01850 vs. NCBI_GenBank
Match: PTQ42520.1 (hypothetical protein MARPO_0029s0053 [Marchantia polymorpha]) HSP 1 Score: 347.8 bits (891), Expect = 3.000e-92 Identity = 167/260 (64.23%), Postives = 208/260 (80.00%), Query Frame = 0
Query: 11 LPIYQTHEGVSGTMEIVLAPGKKLEHLGIKIELVGAIEMLNDRTSTYEFTSLVKELETAGVLYSDKQYSFDFATVDKPYDSYTGLNVRLRYFLKVTVTRQYAPNILAEQELVVQSTAEPPPSQSSIKMEVGIEDCLHIEFEYDKQKYHLKDVILGKIYFLLVRIKIKHMELAIIRRESAGTGSNVTNESETLCKFEVMDGAPVKGECIPLRLFLSSIDLTPTYRSVNNRFSVRYYLNLVLVDEEDRRYFKQQEVVFYNKD 271
+P++Q+ E V G + I PGKK+EH+G+KIEL+G IE+ DR S Y+FTSLV+EL+ G + K + F+F+TV+ PY+SY G+NVRLRY LKVT++R YA NI+ ++ V++ + PP +SIKMEVGIEDCLHIEFEY K KYHLKDVI+GKIYFLLVRIKIKHMEL I RRES G+G N NE+ETL K+E+MDGAPV+GE IP+RLFLS DLTPTYR++NN+FSV+YYLNLVLVDEEDRRYFKQQE+ D
Sbjct: 39 VPLFQSQESVVGEVRIEPLPGKKVEHMGVKIELLGQIELYFDRGSFYDFTSLVRELDVPGEIVDRKTFPFEFSTVEMPYESYNGVNVRLRYILKVTISRSYATNIVEYKDFWVRNFSPPPEINNSIKMEVGIEDCLHIEFEYSKSKYHLKDVIIGKIYFLLVRIKIKHMELEIRRRESTGSGPNTYNETETLAKYEIMDGAPVRGESIPIRLFLSPYDLTPTYRNINNKFSVKYYLNLVLVDEEDRRYFKQQEITMMRID 298
BLAST of NO18G01850 vs. NCBI_GenBank
Match: CBN73818.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 347.1 bits (889), Expect = 5.100e-92 Identity = 167/259 (64.48%), Postives = 211/259 (81.47%), Query Frame = 0
Query: 11 LPIYQTHEGVSGTMEIVLAPGKKLEHLGIKIELVGAIEMLNDRTSTYEFTSLVKELETAGVLYSDKQYSFDFATVDKPYDSYTGLNVRLRYFLKVTVTRQYAPNILAEQELVVQSTAEPPPSQSSIKMEVGIEDCLHIEFEYDKQKYHLKDVILGKIYFLLVRIKIKHMELAIIRRESAGTGSNVTNESETLCKFEVMDGAPVKGECIPLRLFLSSIDLTPTYRSVNNRFSVRYYLNLVLVDEEDRRYFKQQEVVFYNK 270
LPI++ E VSGT +++APGKK++HLGIK EL+G IE+ DR + YEF+S+V+EL+TAG L ++QY FDF +KPY+SY+GLNVRLRYF++VT++ + N+ E + VVQ+ + P + S+KMEVGIEDCLHIEFEYDK YHL+DV++GKIYFLLVRIKIKHME+AIIRRE+AGTGSN NESET+ K+EVMDGAP KGEC+PLR+FL LTPTYR N+F+V+Y+LNLVLVDEEDRRYFKQQEV + K
Sbjct: 39 LPIFEGSEAVSGTATVLVAPGKKVDHLGIKAELIGQIELYYDRGNHYEFSSVVRELDTAGALVGNRQYRFDFNLAEKPYESYSGLNVRLRYFVRVTISTR-GKNVTKEMDFVVQNIQQEPEALDSLKMEVGIEDCLHIEFEYDKSAYHLQDVVIGKIYFLLVRIKIKHMEMAIIRRETAGTGSNQYNESETIIKYEVMDGAPAKGECVPLRVFLKPYALTPTYRG-TNKFTVKYFLNLVLVDEEDRRYFKQQEVTLWRK 295
BLAST of NO18G01850 vs. NCBI_GenBank
Match: XP_002532583.1 (PREDICTED: vacuolar protein sorting-associated protein 26A [Ricinus communis] >EEF29800.1 vacuolar protein sorting 26, vps26, putative [Ricinus communis]) HSP 1 Score: 346.3 bits (887), Expect = 8.800e-92 Identity = 170/262 (64.89%), Postives = 208/262 (79.39%), Query Frame = 0
Query: 6 GTTHLLPIYQTHEGVSGTMEIVLAPGKKLEHLGIKIELVGAIEMLNDRTSTYEFTSLVKELETAGVLYSDKQYSFDFATVDKPYDSYTGLNVRLRYFLKVTVTRQYAPNILAEQELVVQSTAEPPPSQSSIKMEVGIEDCLHIEFEYDKQKYHLKDVILGKIYFLLVRIKIKHMELAIIRRESAGTGSNVTNESETLCKFEVMDGAPVKGECIPLRLFLSSIDLTPTYRSVNNRFSVRYYLNLVLVDEEDRRYFKQQEVVFY 268
G + L+P++Q+ E + G + + GKKLEH GIKIEL+G IE+ DR + Y+FTSLV+EL+ G LY K Y F+F+TV+ PY+SY G+NVRLRY LKVTV+R Y NI+ Q+ VV++ + PP +SIKMEVGIEDCLHIEFEY K KYHLKDVI+GKIYFLLVRIKIK+MEL I RRES G+G N E+ETL KFE+MDGAPV+GE IP RLFLS +LTPTYR++NN+FSV+YYLNLVLVDEEDRRYFKQQE+ Y
Sbjct: 34 GQSVLVPLFQSQENIVGEVAVEPLQGKKLEHTGIKIELLGQIELYFDRGNFYDFTSLVRELDIPGELYERKTYPFEFSTVEMPYESYNGVNVRLRYILKVTVSRNYVSNIVEYQDFVVRNYSPPPSVNNSIKMEVGIEDCLHIEFEYSKSKYHLKDVIVGKIYFLLVRIKIKNMELEIRRRESTGSGPNTYVETETLAKFELMDGAPVRGESIPTRLFLSPYELTPTYRNINNKFSVKYYLNLVLVDEEDRRYFKQQEITIY 295
BLAST of NO18G01850 vs. NCBI_GenBank
Match: PIN21405.1 (Membrane coat complex Retromer, subunit VPS26 [Handroanthus impetiginosus]) HSP 1 Score: 346.3 bits (887), Expect = 8.800e-92 Identity = 166/262 (63.36%), Postives = 213/262 (81.30%), Query Frame = 0
Query: 6 GTTHLLPIYQTHEGVSGTMEIVLAPGKKLEHLGIKIELVGAIEMLNDRTSTYEFTSLVKELETAGVLYSDKQYSFDFATVDKPYDSYTGLNVRLRYFLKVTVTRQYAPNILAEQELVVQSTAEPPPSQSSIKMEVGIEDCLHIEFEYDKQKYHLKDVILGKIYFLLVRIKIKHMELAIIRRESAGTGSNVTNESETLCKFEVMDGAPVKGECIPLRLFLSSIDLTPTYRSVNNRFSVRYYLNLVLVDEEDRRYFKQQEVVFY 268
G T ++P++Q+ E +SG + + GKK+EH GIK+EL+G IEM DR + Y+FTSLV+EL+ G +Y K + F+F+TV+ PY++Y+G+NVRLRY LKVT++R YA +I+ Q+ VVQ+ + PP +SIKMEVGIEDCLHIEFEY+K KYHLKDVI+GKIYFLLVRIKIK+M+L I RRES G+G N E+ETL KFE+MDGAPV+GE IP+RLFLS +LTPTYR++NN+FSV+YYLNLVLVDEEDRRYFKQQE+ Y
Sbjct: 34 GQTVMVPLFQSQENISGKISVEPVSGKKVEHNGIKVELLGQIEMYFDRGNFYDFTSLVRELDVPGEIYERKTFPFEFSTVEMPYETYSGVNVRLRYVLKVTISRGYAGSIVEYQDFVVQNYSPPPQINNSIKMEVGIEDCLHIEFEYNKSKYHLKDVIIGKIYFLLVRIKIKNMDLEIRRRESTGSGPNTHVETETLAKFELMDGAPVRGESIPIRLFLSPYELTPTYRNINNKFSVKYYLNLVLVDEEDRRYFKQQEITMY 295
BLAST of NO18G01850 vs. NCBI_GenBank
Match: XP_020574227.1 (vacuolar protein sorting-associated protein 26B-like [Phalaenopsis equestris] >XP_020574228.1 vacuolar protein sorting-associated protein 26B-like [Phalaenopsis equestris]) HSP 1 Score: 345.9 bits (886), Expect = 1.100e-91 Identity = 166/262 (63.36%), Postives = 211/262 (80.53%), Query Frame = 0
Query: 6 GTTHLLPIYQTHEGVSGTMEIVLAPGKKLEHLGIKIELVGAIEMLNDRTSTYEFTSLVKELETAGVLYSDKQYSFDFATVDKPYDSYTGLNVRLRYFLKVTVTRQYAPNILAEQELVVQSTAEPPPSQSSIKMEVGIEDCLHIEFEYDKQKYHLKDVILGKIYFLLVRIKIKHMELAIIRRESAGTGSNVTNESETLCKFEVMDGAPVKGECIPLRLFLSSIDLTPTYRSVNNRFSVRYYLNLVLVDEEDRRYFKQQEVVFY 268
G T ++P++Q+ E +SG + I GKK+EH+G+K+EL+G IE+ DR + Y+FTSLV+EL+ G +Y K Y F+F+TV+ PY+SY G+NVRLRY LKVTV+R Y NI+ QE V++ + PP +SIKMEVGIEDCLHIEFEY+K KYHLKDVI+GKIYFLLVRIKIK+MEL I RRES G+G N E+ETL KFE+MDGAPV+GE IP+RLFLS +LTPTYR++NN++SV+Y+LNLVLVDEEDRRYFKQQE+ Y
Sbjct: 34 GQTTMVPLFQSQETISGEVSIEPFHGKKVEHIGVKVELLGQIELYFDRGNFYDFTSLVRELDVPGEIYERKAYPFEFSTVEMPYESYNGVNVRLRYILKVTVSRNYVSNIVEYQEFCVRNYSTPPTINNSIKMEVGIEDCLHIEFEYNKSKYHLKDVIIGKIYFLLVRIKIKNMELEIRRRESTGSGPNTYVETETLAKFELMDGAPVRGESIPIRLFLSPYELTPTYRNINNKYSVKYFLNLVLVDEEDRRYFKQQEITVY 295
BLAST of NO18G01850 vs. NCBI_GenBank
Match: ONK81855.1 (uncharacterized protein A4U43_C01F33560 [Asparagus officinalis]) HSP 1 Score: 345.1 bits (884), Expect = 2.000e-91 Identity = 169/267 (63.30%), Postives = 209/267 (78.28%), Query Frame = 0
Query: 1 MSSGKGTTHLLPIYQTHEGVSGTMEIVLAPGKKLEHLGIKIELVGAIEMLNDRTSTYEFTSLVKELETAGVLYSDKQYSFDFATVDKPYDSYTGLNVRLRYFLKVTVTRQYAPNILAEQELVVQSTAEPPPSQSSIKMEVGIEDCLHIEFEYDKQKYHLKDVILGKIYFLLVRIKIKHMELAIIRRESAGTGSNVTNESETLCKFEVMDGAPVKGECIPLRLFLSSIDLTPTYRSVNNRFSVRYYLNLVLVDEEDRRYFKQQEVVFY 268
M G T L+P++Q+ E ++G + I GKK+EH G+KIEL+G IE+ DR + Y+FTSLV+ELE G LY K Y F+F+TV+ PY+SY G+NVRLRY LKVTV+R NI+A Q+ V++ P +SIKMEVGIEDCLHIEFEY+K KYHLKD+I+GKIYFLLVRIKIK+MEL I RRES G+G N E+ETL KFE+MDGAPV+GE IP+RLFLS +LTPTYR++NN+FSV+YYLNLVLVDEEDRRYFKQQE+ Y
Sbjct: 1021 MKMDNGKTALVPLFQSQENIAGEVSIEPVHGKKVEHTGVKIELLGQIELYFDRGNFYDFTSLVRELEVPGELYERKTYQFEFSTVEMPYESYNGVNVRLRYVLKVTVSRSVFSNIVAYQDFCVRNYTPVPTINNSIKMEVGIEDCLHIEFEYNKSKYHLKDIIIGKIYFLLVRIKIKNMELEIRRRESTGSGPNTYVETETLAKFELMDGAPVRGESIPIRLFLSPYELTPTYRNINNKFSVKYYLNLVLVDEEDRRYFKQQEITMY 1287
BLAST of NO18G01850 vs. NCBI_GenBank
Match: XP_020262440.1 (vacuolar protein sorting-associated protein 26A-like [Asparagus officinalis]) HSP 1 Score: 345.1 bits (884), Expect = 2.000e-91 Identity = 169/267 (63.30%), Postives = 209/267 (78.28%), Query Frame = 0
Query: 1 MSSGKGTTHLLPIYQTHEGVSGTMEIVLAPGKKLEHLGIKIELVGAIEMLNDRTSTYEFTSLVKELETAGVLYSDKQYSFDFATVDKPYDSYTGLNVRLRYFLKVTVTRQYAPNILAEQELVVQSTAEPPPSQSSIKMEVGIEDCLHIEFEYDKQKYHLKDVILGKIYFLLVRIKIKHMELAIIRRESAGTGSNVTNESETLCKFEVMDGAPVKGECIPLRLFLSSIDLTPTYRSVNNRFSVRYYLNLVLVDEEDRRYFKQQEVVFY 268
M G T L+P++Q+ E ++G + I GKK+EH G+KIEL+G IE+ DR + Y+FTSLV+ELE G LY K Y F+F+TV+ PY+SY G+NVRLRY LKVTV+R NI+A Q+ V++ P +SIKMEVGIEDCLHIEFEY+K KYHLKD+I+GKIYFLLVRIKIK+MEL I RRES G+G N E+ETL KFE+MDGAPV+GE IP+RLFLS +LTPTYR++NN+FSV+YYLNLVLVDEEDRRYFKQQE+ Y
Sbjct: 29 MKMDNGKTALVPLFQSQENIAGEVSIEPVHGKKVEHTGVKIELLGQIELYFDRGNFYDFTSLVRELEVPGELYERKTYQFEFSTVEMPYESYNGVNVRLRYVLKVTVSRSVFSNIVAYQDFCVRNYTPVPTINNSIKMEVGIEDCLHIEFEYNKSKYHLKDIIIGKIYFLLVRIKIKNMELEIRRRESTGSGPNTYVETETLAKFELMDGAPVRGESIPIRLFLSPYELTPTYRNINNKFSVKYYLNLVLVDEEDRRYFKQQEITMY 295
BLAST of NO18G01850 vs. NCBI_GenBank
Match: XP_011017559.1 (PREDICTED: vacuolar protein sorting-associated protein 26B-like isoform X1 [Populus euphratica]) HSP 1 Score: 344.4 bits (882), Expect = 3.300e-91 Identity = 164/267 (61.42%), Postives = 213/267 (79.78%), Query Frame = 0
Query: 1 MSSGKGTTHLLPIYQTHEGVSGTMEIVLAPGKKLEHLGIKIELVGAIEMLNDRTSTYEFTSLVKELETAGVLYSDKQYSFDFATVDKPYDSYTGLNVRLRYFLKVTVTRQYAPNILAEQELVVQSTAEPPPSQSSIKMEVGIEDCLHIEFEYDKQKYHLKDVILGKIYFLLVRIKIKHMELAIIRRESAGTGSNVTNESETLCKFEVMDGAPVKGECIPLRLFLSSIDLTPTYRSVNNRFSVRYYLNLVLVDEEDRRYFKQQEVVFY 268
M G T ++P+ + E ++G + I GKK++H+G+K+EL+G IEM DR++ Y+F SLV+EL+ G +Y K Y F+F+TV+ PY++Y G+NVRLRY LKVTVTR YA +I+ Q+ +V + + PPP +SIKMEVGIEDCLHIEFEY+K KYHLKDVI+GKIYFLLVRIKIK+M+L I RRES G+G+N E+ETL KFE+MDGAPV+GE IP+RLFLS +LTPT+R++NN+FSV+YYLNLVLVDEEDRRYFKQQE+ Y
Sbjct: 29 MKKENGQTLMVPLCHSQENIAGKISIEPLQGKKVDHIGVKVELLGQIEMYFDRSNFYDFASLVRELDVPGEIYERKTYPFEFSTVEMPYETYNGVNVRLRYVLKVTVTRGYAGSIIEYQDFMVSNYSPPPPINNSIKMEVGIEDCLHIEFEYNKSKYHLKDVIIGKIYFLLVRIKIKNMDLEIRRRESTGSGANTYVETETLAKFELMDGAPVRGESIPIRLFLSPYELTPTHRNINNKFSVKYYLNLVLVDEEDRRYFKQQEITIY 295 The following BLAST results are available for this feature:
BLAST of NO18G01850 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO18G01850 ID=NO18G01850|Name=NO18G01850|organism=Nannochloropsis oceanica|type=gene|length=2396bpback to top protein sequence of NO18G01850.1 >NO18G01850.1-protein ID=NO18G01850.1-protein|Name=NO18G01850.1|organism=Nannochloropsis oceanica|type=polypeptide|length=302bpback to top protein sequence of NO18G01850.2 >NO18G01850.2-protein ID=NO18G01850.2-protein|Name=NO18G01850.2|organism=Nannochloropsis oceanica|type=polypeptide|length=273bpback to top Synonyms
Publications
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