NO18G01810, NO18G01810 (gene) Nannochloropsis oceanica

Overview
NameNO18G01810
Unique NameNO18G01810
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length698
Alignment locationchr18:563163..563860 -

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Properties
Property NameValue
DescriptionMembrane associated eicosanoid/glutathione metabolism-like domain protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr18genomechr18:563163..563860 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR023352MAPEG-like_dom
IPR001129Membr-assoc_MAPEG
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
[Close]
BLAST of NO18G01810 vs. NCBI_GenBank
Match: EWM23396.1 (Membrane associated eicosanoid/glutathione metabolism-like domain protein [Nannochloropsis gaditana])

HSP 1 Score: 240.7 bits (613), Expect = 3.200e-60
Identity = 118/157 (75.16%), Postives = 139/157 (88.54%), Query Frame = 0 
Query:   14 TLHGSSALLTTLVSCTALLYFKHVWTLTVQGGAAIQSGNRIDEDYNRLGLTRPSAVSEADQQNDKRWRRIVANDLENIPIGLIVLWSAAMATSAKGSDGGVGVIVLTILFTISRFAYTYCFVTALQPWRTVAWTAGVLCVVVAACLGVVVAFIAQFD 171
            T++G S LL+TLV+CT LLY KHVWTLT+QGGAAI+SGNRIDEDY++LGL RP  VS+ D+Q D RWRRIVANDLENIP+GLIVLWSAA+A+SAK S+GG+GVIVLTI+FT++RFAYT C+V ALQPWRTVAWT GVL VV A  LG+VVAFIAQF+
Sbjct:    8 TIYGGSMLLSTLVTCTGLLYLKHVWTLTMQGGAAIKSGNRIDEDYSKLGLNRPLEVSDVDRQQDARWRRIVANDLENIPLGLIVLWSAALASSAKESEGGIGVIVLTIVFTVARFAYTACYVFALQPWRTVAWTLGVLSVVAAVFLGIVVAFIAQFE 164
[Close]
BLAST of NO18G01810 vs. NCBI_GenBank
Match: OQR94942.1 (hypothetical protein ACHHYP_00822 [Achlya hypogyna])

HSP 1 Score: 89.0 bits (219), Expect = 1.600e-14
Identity = 59/152 (38.82%), Postives = 82/152 (53.95%), Query Frame = 0 
Query:   25 LVSCTALLYFKHVWTLTVQGGAAIQSGNRIDEDY--------NRLGLTRPSAVSEADQ---QNDKRWRRIVANDLENIPIGLIVLWSAAMATSAKGSDGGVGVIVLTILFTISRFAYTYCFVTALQPWRTVAWTAGVLCVVVAACLGVVVAF 166
            L+ CT +LYFK++ TL VQGG    +G R  ED            GL +    SEA Q     D RW+RI+ NDLEN+P G+++ W + +A    G +  V   V  I+FT+ R  +T  F  A+   RT AWT G+L ++  A  G+V AF
Sbjct:   12 LMICTGILYFKYLATLVVQGGKKFTAGTRAPEDMAASSGIPSQNFGLNQNIVESEAAQLAKAEDIRWQRIIGNDLENLPFGILLAWFSVLA----GGNTSV-TCVAFIVFTVVRVVHTLAFAFAIFWPRTSAWTIGILSILTMAINGIVGAF 158
[Close]
BLAST of NO18G01810 vs. NCBI_GenBank
Match: OQR88553.1 (hypothetical protein THRCLA_10247 [Thraustotheca clavata])

HSP 1 Score: 86.7 bits (213), Expect = 7.800e-14
Identity = 57/166 (34.34%), Postives = 82/166 (49.40%), Query Frame = 0 
Query:   15 LHGSSALLTTLVSCTALLYFKHVWTLTVQGGAAIQSGNRIDEDYN----------RLGLTRPSAVSEADQ---------------QNDKRWRRIVANDLENIPIGLIVLWSAAMATSAKGSDGGVGVIVLTILFTISRFAYTYCFVTALQPWRTVAWTAGVLCVVV 156
            +HG S  L  L++CT +L  K   +  +QGG    +G R  ED +            G+  P+A  E D+               + D RW R+V NDLENIPIGL++ W+A  +      + G       I+FT+SR A+T  +   +QP R +AWTAGVL  +V
Sbjct:    1 MHGISD-LKVLIACTGVLAIKFYASTFIQGGKRFAAGTRPPEDQSLSLNKKNQKQSFGVRDPNAKDEDDENTKKPVRVQPPARAIEEDLRWERLVRNDLENIPIGLLISWAAVNSGGNPLVNSGA-----IIVFTVSRVAHTIAYAKGVQPHRAIAWTAGVLSTLV 160
[Close]
BLAST of NO18G01810 vs. NCBI_GenBank
Match: XP_009845355.1 (hypothetical protein H257_18044 [Aphanomyces astaci] >ETV65150.1 hypothetical protein H257_18044 [Aphanomyces astaci])

HSP 1 Score: 85.9 bits (211), Expect = 1.300e-13
Identity = 59/152 (38.82%), Postives = 79/152 (51.97%), Query Frame = 0 
Query:   25 LVSCTALLYFKHVWTLTVQGGAAIQSGNRIDEDY---------NRLGLTRPSAVSEADQQNDKRWRRIVANDLENIPIGLIVLWSAAMATSAKGSDGGVGVIVLTIL--FTISRFAYTYCFVTALQPWRTVAW---TAGVLCVVVAACLGVV 163
            LV+ TA+LY K + T T+QG     +G R  ED             G     A S A  + D RW+RIV NDLENIP+GL+V WSA          GG  ++ +  +  FT +R  +TY F   LQP R+ AW   TAGVL + + +  G+V
Sbjct:    8 LVASTAVLYAKFLVTTTIQGSKRFVTGTRCPEDQLLKGVPATKTAFGFNAGGASSAAATEADLRWQRIVQNDLENIPLGLLVAWSAV-------HSGGSELVNIAAIGTFTAARVYHTYAFAKGLQPHRSRAWVLGTAGVLALALNSLYGIV 152
[Close]
BLAST of NO18G01810 vs. NCBI_GenBank
Match: XP_012203042.1 (hypothetical protein SPRG_08418 [Saprolegnia parasitica CBS 223.65] >XP_012212211.1 hypothetical protein SPRG_17314 [Saprolegnia parasitica CBS 223.65] >KDO17081.1 hypothetical protein SPRG_17314 [Saprolegnia parasitica CBS 223.65] >KDO26344.1 hypothetical protein SPRG_08418 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 85.9 bits (211), Expect = 1.300e-13
Identity = 60/157 (38.22%), Postives = 85/157 (54.14%), Query Frame = 0 
Query:   20 ALLTTLVSCTALLYFKHVWTLTVQGGAAIQSGNRIDEDY--------NRLGLTRPSAVSEADQQ---NDKRWRRIVANDLENIPIGLIVLWSAAMATSAKGSDGGVGVIVLTILFTISRFAYTYCFVTALQPWRTVAWTAGVLCVVVAACLGVVVAF 166
            A    L+ CTA+LY K++ +L VQGG    +G R  ED            GL+     S+A QQ   +D RW+RIV NDLEN+P G+I+ W++ +A    G +  V   V  I+FTI R  +T  F   +   RT AWT G+L ++  A  G+V +F
Sbjct:    6 ATTQVLMLCTAILYVKYLASLMVQGGKKFTAGTRAPEDMAASSAIPRQNFGLSANIVESDAHQQAKADDIRWQRIVGNDLENLPFGIILAWTSILA----GGNTSV-TSVAYIVFTIVRVVHTLAFANHIFWPRTSAWTLGILSMLTMAINGIVGSF 157
[Close]
BLAST of NO18G01810 vs. NCBI_GenBank
Match: XP_008609162.1 (hypothetical protein SDRG_05234 [Saprolegnia diclina VS20] >EQC37642.1 hypothetical protein SDRG_05234 [Saprolegnia diclina VS20])

HSP 1 Score: 84.7 bits (208), Expect = 3.000e-13
Identity = 60/157 (38.22%), Postives = 84/157 (53.50%), Query Frame = 0 
Query:   20 ALLTTLVSCTALLYFKHVWTLTVQGGAAIQSGNRIDEDY--------NRLGLTRPSAVSEADQQ---NDKRWRRIVANDLENIPIGLIVLWSAAMATSAKGSDGGVGVIVLTILFTISRFAYTYCFVTALQPWRTVAWTAGVLCVVVAACLGVVVAF 166
            A    L+ CTA+LY K++  L VQGG    +G R  ED            GL+     S+A QQ   +D RW+RIV NDLEN+P G+I+ W++ +A    G +  V   V  I+FTI R  +T  F   +   RT AWT G+L ++  A  G+V +F
Sbjct:    6 ATTQVLMLCTAILYVKYLAALMVQGGKKFTAGTRAPEDMAASSAIPRQNFGLSTNVVDSDAYQQAKADDIRWQRIVGNDLENLPFGIILAWTSILA----GGNTSV-TSVAYIIFTIVRVVHTLAFANHIFWPRTSAWTLGILSMLTMAINGIVGSF 157
[Close]
BLAST of NO18G01810 vs. NCBI_GenBank
Match: OQR95843.1 (hypothetical protein THRCLA_07520 [Thraustotheca clavata])

HSP 1 Score: 83.6 bits (205), Expect = 6.600e-13
Identity = 54/144 (37.50%), Postives = 74/144 (51.39%), Query Frame = 0 
Query:   26 VSCTALLYFKHVWTLTVQGGAAIQSGNRIDED-----YNRLGL-----TRPSAVSEADQQNDKRWRRIVANDLENIPIGLIVLWSAAMATSAKGSDGGVGVIVLTIL--FTISRFAYTYCFVTALQPWRTVAWTAGVLCVVVAA 158
            ++ TA+LY K ++T T+QGG    +G R  ED     YN+           + V+ A  + D RW+RIV NDLENIPIGL+V W A  +       GG   +  + +  FT +R  +TY +   LQP R  AW  G   V V A
Sbjct:    9 ITSTAVLYAKFIFTSTIQGGKRFAAGTRPPEDKIFKQYNKTNQLQSFGVEKTGVNAAALEEDIRWQRIVRNDLENIPIGLLVAWGAVQS-------GGFEAVTTSAIATFTAARLFHTYAYANGLQPHRGYAWALGAASVGVLA 145
[Close]
BLAST of NO18G01810 vs. NCBI_GenBank
Match: GAY06595.1 (GTP-binding protein Parf [Pythium insidiosum])

HSP 1 Score: 83.2 bits (204), Expect = 8.700e-13
Identity = 51/145 (35.17%), Postives = 79/145 (54.48%), Query Frame = 0 
Query:   26 VSCTALLYFKHVWTLTVQGGAAIQSGNRIDEDYNRLGLTRPSA-------VSEADQ------QNDKRWRRIVANDLENIPIGLIVLWSAAMATSAKGSDGGVGVIVLTILFTISRFAYTYCFVTALQPWRTVAWTAGVLCVVVAA 158
            V+C A+LYFKH+ T  +QGG   +SG R  ED N+L L + +        ++E D+      + + RWRRIVANDLE+IP  L V     +A + + +          IL+T++R  ++Y +   +QP R + W   VLC++  A
Sbjct:   11 VACAAVLYFKHLVTTGIQGGKTFKSGGRPPED-NKLSLAKGNPKQNYGLNLAEKDEKVLKAREVEHRWRRIVANDLESIPFALFVFAGGVLANANEAA-----FAATMILYTVARCLHSYAYAHQMQPHRALFWFIAVLCILAGA 149
[Close]
BLAST of NO18G01810 vs. NCBI_GenBank
Match: EWM25706.1 (Membrane associated eicosanoid/glutathione metabolism-like domain protein [Nannochloropsis gaditana])

HSP 1 Score: 82.8 bits (203), Expect = 1.100e-12
Identity = 59/171 (34.50%), Postives = 84/171 (49.12%), Query Frame = 0 
Query:   10 NSTKTLHGSSALLTTLVSCTALLYFKHVWTLTVQGGAAIQSGNRIDEDYNRL---------GLTRPSAVSEADQ------QNDKRWRRIVANDLENIPIGLIVLWSAAMATSAKGSDGGVGVIVLTILFTISRFAYTYCFVTALQPWRTVAWTAGVLCVVVAACLGVVVAF 166
            N    L G +A L      +  L  KH+ T+ VQGGA   +G R  ED   +         G  + +     D+      QN++RW RIVANDLENIP+GLI+ W +  +  +  +      +VL + FT+SR  +T  +    QP R +A+  GVL VV     GV+ AF
Sbjct:   10 NENAFLGGPNAPLQATAVASLTLLVKHILTVFVQGGARFGAGMRPPEDVCFMPKAGKQSFDGTAKAAERGNEDKALKKALQNEQRWTRIVANDLENIPLGLIIAWGSLQSPRSPPAH-----VVLVLAFTVSRILHTVTYAAGKQPHRALAFFGGVLAVVGMGVNGVLGAF 175
[Close]
BLAST of NO18G01810 vs. NCBI_GenBank
Match: OQS07651.1 (hypothetical protein THRCLA_00352 [Thraustotheca clavata])

HSP 1 Score: 82.4 bits (202), Expect = 1.500e-12
Identity = 54/149 (36.24%), Postives = 77/149 (51.68%), Query Frame = 0 
Query:   15 LHGSSALLTTLVSCTALLYFKHVWTLTVQGGAAIQSGNRIDEDYNR--------LGLTRPSAVSEADQQNDKRWRRIVANDLENIPIGLIVLWSAAMATSAKGSDGGVGVIVLTILFTISRFAYTYCFVTALQPWRTVAWTAGVLCVVV 156
            L G+++ +  +  CT LLY K+  T  V G     SGNR  ED N          GL       +  +  D RW+RIVANDLENIPIGLI+ W+A +     G D     I + I+FT +RF +T  +  A    RT  +  G++C+++
Sbjct:    2 LDGNTSHVQVVAICTVLLYIKYAITTLVGGMKKFASGNRPPEDGNSAQDGPKQDFGLHLDGDEVDKAKLEDLRWQRIVANDLENIPIGLIMAWAAVVT----GGDSKRTTIAI-IIFTTARFLHTLAYALAYSKARTAMYMIGLICILI 145
The following BLAST results are available for this feature:
BLAST of NO18G01810 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM23396.13.200e-6075.16Membrane associated eicosanoid/glutathione metabol... [more]
OQR94942.11.600e-1438.82hypothetical protein ACHHYP_00822 [Achlya hypogyna... [more]
OQR88553.17.800e-1434.34hypothetical protein THRCLA_10247 [Thraustotheca c... [more]
XP_009845355.11.300e-1338.82hypothetical protein H257_18044 [Aphanomyces astac... [more]
XP_012203042.11.300e-1338.22hypothetical protein SPRG_08418 [Saprolegnia paras... [more]
XP_008609162.13.000e-1338.22hypothetical protein SDRG_05234 [Saprolegnia dicli... [more]
OQR95843.16.600e-1337.50hypothetical protein THRCLA_07520 [Thraustotheca c... [more]
GAY06595.18.700e-1335.17GTP-binding protein Parf [Pythium insidiosum][more]
EWM25706.11.100e-1234.50Membrane associated eicosanoid/glutathione metabol... [more]
OQS07651.11.500e-1236.24hypothetical protein THRCLA_00352 [Thraustotheca c... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL008nonsL008Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR046ncniR046Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR043ngnoR043Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK004033NSK004033Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO18G01810.1NO18G01810.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|223523gene_8868Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100189g2gene7069Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO18G01810.1NO18G01810.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO18G01810 ID=NO18G01810|Name=NO18G01810|organism=Nannochloropsis oceanica|type=gene|length=698bp
ATGGACCCCGATTTCCTTTTCCCCAAAAACAGCACCAAGACACTTCACGG
CTCCTCCGCGCTACTGACTACCCTCGTGAGCTGTACGGCCCTTCTCTATT
TTAAGCATGTCTGGACTCTCACTGTGCAGgtatggctgagtcactgcttg
tttgccttggtcgaggaggatacgcatatgtcccgatcgtctttttcatg
tttccccccagttcgagacgtaccgtgtcgctgaatgatattcgagtaat
gccttacctagggcaactctttcaacttacctactctcccctctctttcc
ccttcaaccactagGGTGGAGCCGCAATCCAATCCGGAAACCGCATCGAC
GAGGACTACAACAGGCTAGGCCTCACCCGCCCCTCGGCCGTGTCAGAAGC
GGACCAACAAAATGACAAGCGTTGGCGTCGCATCGTTGCCAATGATTTGG
AGAATATTCCGATTGGTTTAATCGTGCTGTGGTCGGCGGCAATGGCTACG
AGTGCCAAGGGTTCGGATGGAGGGGTCGGGGTGATAGTACTCACAATCCT
ATTTACCATCTCGAGGTTTGCGTACACATATTGTTTTGTAACGGCGTTGC
AGCCGTGGAGAACGGTGGCATGGACGGCGGGGGTGCTGTGTGTGGTGGTG
GCGGCCTGCTTGGGGGTGGTGGTTGCCTTTATTGCACAGTTTGACTGA
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protein sequence of NO18G01810.1

>NO18G01810.1-protein ID=NO18G01810.1-protein|Name=NO18G01810.1|organism=Nannochloropsis oceanica|type=polypeptide|length=171bp
MDPDFLFPKNSTKTLHGSSALLTTLVSCTALLYFKHVWTLTVQGGAAIQS
GNRIDEDYNRLGLTRPSAVSEADQQNDKRWRRIVANDLENIPIGLIVLWS
AAMATSAKGSDGGVGVIVLTILFTISRFAYTYCFVTALQPWRTVAWTAGV
LCVVVAACLGVVVAFIAQFD*
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Synonyms
Publications