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Properties
| Property Name | Value |
|---|
| Description | Cortactin-binding protein 2 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| chr18 | genome | chr18:556233..560595 - |
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Homology
BLAST of NO18G01780 vs. NCBI_GenBank
Match: EWM23384.1 (cortactin-binding protein 2 [Nannochloropsis gaditana]) HSP 1 Score: 271.6 bits (693), Expect = 3.700e-69 Identity = 136/187 (72.73%), Postives = 154/187 (82.35%), Query Frame = 0
Query: 58 MDLLIELGLAFGLASLLLALAPFYYMFITLAMLLGVLLLLAGVLDPFEIPWYFWAGLCFYLAIRHQTDGYVKGSLCKAAADGNYELVKKLLVINHGQYALELDEKGYSPVMHAARRGHLPLVKLLLSTGLYDPRNLSAKSRSGKSALFLAAQANHEQIVRLLLERGADPAGLMQDTWFQRFLPFIAA 245
MDL IELGL GLASLLL ++ +TL++LLG LLLLAGVL+PFEIPWY WA LC YLA+RHQ GY KGSLCKAAADGN LV+KLL +NHGQYALELD KGYSP+MHAARRG LP+V+LLL+T LYD N+S KSRSGKSALFLAAQA E +VRLLLE GADPAGL +D+W QRFLPF+ A
Sbjct: 1 MDLFIELGLLVGLASLLLVVSSINATLVTLSLLLGCLLLLAGVLEPFEIPWYVWAALCLYLAVRHQGSGYTKGSLCKAAADGNIALVRKLLAVNHGQYALELDHKGYSPLMHAARRGDLPMVRLLLATNLYDAHNVSIKSRSGKSALFLAAQAKQEAMVRLLLEHGADPAGLARDSWAQRFLPFLTA 187
BLAST of NO18G01780 vs. NCBI_GenBank
Match: XP_005853395.1 (ankyrin repeat-containing protein [Nannochloropsis gaditana CCMP526] >EKU22966.1 ankyrin repeat-containing protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 120.9 bits (302), Expect = 8.200e-24 Identity = 56/81 (69.14%), Postives = 67/81 (82.72%), Query Frame = 0
Query: 123 QTDGYVKGSLCKAAADGNYELVKKLLVINHGQYALELDEKGYSPVMHAARRGHLPLVKLLLSTGLYDPRNLSAKSRSGKSA 204
Q+ +GSLCKAAADGN LV+KLL +NHGQYALELD KGYSP+MHAARRG LP+V+LLL+T LYD N+S KSRSG ++
Sbjct: 3 QSPSRFRGSLCKAAADGNIALVRKLLAVNHGQYALELDRKGYSPLMHAARRGDLPMVRLLLATNLYDAHNVSIKSRSGNTS 83
BLAST of NO18G01780 vs. NCBI_GenBank
Match: XP_020782653.1 (ankyrin repeat domain-containing protein 50-like [Boleophthalmus pectinirostris]) HSP 1 Score: 64.7 bits (156), Expect = 6.900e-7 Identity = 40/110 (36.36%), Postives = 62/110 (56.36%), Query Frame = 0
Query: 121 RHQTDGYVKGSLCKAAADGNYELVKKLLVINHGQYALELDEKGYSPVMHAARRGHLPLVKLLLSTGLYDPRNLSAKSR-----SGKSALFLAAQANHEQIVRLLLERGAD 226
R+ TDG + L AA +G+ +V LL NHG L D++G +P+ A+R+GH+ ++K+LL + L + G +AL AA H+++VRLLL+ GAD
Sbjct: 520 RNSTDG--RTLLANAATEGSENIVDFLL--NHGADPLLTDQQGQTPLTLASRQGHVKVIKVLLDWAKKQEKGLVTRMMEQVDVEGWTALRSAAWGGHDEVVRLLLDAGAD 625
The following BLAST results are available for this feature:
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO18G01780 ID=NO18G01780|Name=NO18G01780|organism=Nannochloropsis oceanica|type=gene|length=4363bp
GGAGGAGGAGGAGGAGGAGGAGAGAGGCGAGCAAGGCGCCGGCTGGTCTC
TTCATGGATTTGCCGGAGGATGCACGGGCGAAATCCAAGGGAGGGGGGGC
GGGAGGAAGGGAAGGAGGAAAGGCCCGCATCACGCAACCACAGGACCTCC
CGCATCATGTCCACCACATGCACCACCATTGCCACCTCCCGCCTGTCCTC
CTCCTCTTCCTCCTTCCCCATCCTCTCTAGCTCCTCCAGCGACCTCCTTC
CTGTCTGTGCTCTTGCTCTCCTTCCCCCCCTTCCTCGAGCCCTCCCTCGC
TCAATCCCTTCCACCACCCGGCAGCGCCAACGCCGAGCTTCCAGCACACG
TTCCAGGTGTTCTCTTGACACGAACAAAGGGGCTAGCCCTCCTCCTCCTC
CTATTCCTCCTCCTCCTCCCTCCCTGCCTTCTTCTCCTCCTCCGTCCCCT
CCTCTCTCGTTTTCGCCCGCCTGTAGCTTCACCGACGAGGAGGACGAGGA
TGAAGAAGGGGGAGAGGAAGGGAGCGAAGAAGGGCTCGCGAACAAGCCCA
AGATCTGCCCACCCAGCAGCGACAGCGTTGATGCATACCACCGGGCCTGC
TGTCCCAGTCGCTCCTCCCCTCCTCCCTCCCTCCCTCCCTGGAACTCCCA
CACGCCCGTGTAAAGGAAAGCAAGGCGGCCTAGAGCTTGAAGGAGGGCGG
GATGCACAGACCATGTGCCGGGGGAGGACGAGGAAGGGAGGGTGGAAGGG
GTGGACGAGGAGAGGGGAGTGAAGAGGAGGAGGCCTTGATTGTGAAGGGA
GGTGAGGAGAAGGAGGGCAGCCGCGGCGGCAACGGAGAAGGAGGGGAAGC
AGGAAGAACTCCCCCCGCTGTCGGCTTTGCTCTTGTCCTTACTGCTGCTG
CTGCTGCTGGCGTTGTCGTCAAGGGAGAGGGAGAAGGCGTAGACGGGCCC
CTGCTTGTCGACGAGGCGGAAGTAGTGACGACAGGACGAAAAGGGGGGAG
GAGAAGGCATGGAAGGAGGAATCGGAGGACGAAAAGGGGGGAAGAAGGAT
ATATGAGCGTCGTTTCCCTCCTCTTGCTCTTGCTGCTGCTGCTGCGCCAG
GAGAAGGAGGAGGACCCAGACCATGGAAGGCGCAACCAATCGCTGTTGCT
GTTGCTGCTGTAGATACTCGTGGAGACATACGTCTCCAGTGACAGCGGCA
GGATGAGCACCAGAAGCAGCACAACCCTTGTTTTCCCGCTTCGCCTTAAC
TCTTTTGGATTCAGGGAGCGGGAGGGAGGGCGGGAGGGAGGGCAGCTTCC
CCGTGACAAGTAGGATCCCTAAGACTGCTTTTTCCGCCCAAGAACACGCT
TGGAGAGAAGAGAGGGCTATTTGTTGTGAGGGAGTGAAGAGAAGACGGCT
ACAGGAGGAGGGGGAGAAGGAGGAGAAAGGGGTATGGAGGGAAGAAGAGG
GGGAGGGGGAGTAGTAGTCGAGCAGCAGCTGCAGGCCTGGCAGGGGGTTG
GTGAGGGCCATGGAGGAAGGGGGGGAGGGAGAGAGGAAGGAAGGGAGGGT
AATGCTGACGGGGCTCTTGAACGAAGCTTTGAGAGAATTGTCAGCGCTGC
TTTTGCTGCTTTTGCTGCTCTTTCTGCTGATGCTGCTGTTGCTCAGACGG
GCGAGGAGGAGGTGCCAGTGGCCTGCGAGCTGTAGAGGTGGAGAGGGATC
AGACGAAGGAGAAGGAGAAGAAGAAGGAGAGGGGGAGGGCAACTGCCAGT
GTAGCGCAAAGTCAGATCGATCTGTTCCTATTGTTGGCGGTGATTGAATT
GGTGCTCCTGATACTGGTGCTGCTGCTGCTGCTGCCGCTGCTGCTATATC
GCACGGGTTCGGCGGAAGCTCAGCCACTAATAAAGTGATATCCCCTTGAC
CAGGCTGAGATGAAGCCATCCCTAAAAATACAAAGGGTCGACGTGGTGGC
TTGGGGGGCTTAGATTTTGATTGTTCTTTCTGTGGCTCTCGCTGCTGCTG
TTGTTGCTCCTTTTGGTGGCCCTGGCCCATATTCATGGAACTACAGGCAT
CAGTGGTGGTGGTGAGTGCAATTGTTGCATCTCGCTGTCCCACGGATGGC
ACCGATTGTACTGATGAAGAAGAGGCGATTACTACGGTAGTATTAACGCG
CGAGTAAGATGCTGGTGCTGGTGATGGTGCTGGTGCTGTTACTGCTACAG
TTGCTGCTACAGACGGTGATGACGATAAAGGAAGTGGTCGTGTTTGCGTC
GCTCGTCGTGCTGCTACTGGCGATGCTACGCAATGCAATGATGCAGGCTC
TGGAACAGCTGCCGGGGAATTCACTAACGCATGATGAGGAGGAGGAATGG
TACCGCCAATAGGTGGAGGGGGGGAGGGGTATAGCGTACAGCGTGCCGGA
GGAGCACGGGACCAAGGATCTAGACGCCAGGACATGGCAATATCATTCAA
ACGCTGCTTTGTCGACTCGGGAAGTGGGTGATTAATACTGGCATGAAGGG
CCAAACGGGCTCGAGCGCGGGGTCCTGGCCCGCCCGGAGGGAGGTGCCAA
ATGGAGGTGGAGGAACAGGCAGAGGTAGCTGGATGCAAAAGGCGCTTTTT
GCTGTCGGTGGGAGGTGGCGGCGCCGAATCATTGTGGGAACGCCGATCCT
TGTCCATCTGAATCTGGAAAAGGGTTTGCAGGGATGAGTTTGACTGGGTA
AGACTATGGTTAACGCATGCGGCGTTGAAGGAGAGATGTGCACGTTTCAA
TCGGCGAATTAAGTCATGGTTTTTAACCTACAGCCTTCTTGACGGGGTAA
AGAGCCGTCGCACTTACGCAAACTTTACCCTGACACGCGTGAGATAGTGG
TAATGGTACCCACCGGGAGCAGAGCAGCATTGAGCAGCATTCTTACCAAG
CGTCATCACTTGACTTTTTTTGGCGCACCGAACGCAAGGAAAACCTCCTC
CCTCCTCATTCCCACTCTCAAACCCACATCCACACGCACCCACTTGACAC
AACAAAAGATCGTCAGCAGCATAATGGACCTCCTCATCGAGTTGGGCCTG
GCATTTGGCCTGGCTTCTCTCCTTTTGGCACTCGCCCCTTTCTACTACAT
GTTCATCACGCTCGCCATGCTCCTAGGGGTCCTCCTCCTGCTGGCCGGTG
TTCTGGgtacgttgattatttccatggtacaaaaggtggctatgcaccct
tgcccgttgatggtagataaaggcataattatagaggtcttgcgttccat
gtattcgctcttccccacctggacgctcccccctttctctctctccctcc
cttctagATCCCTTCGAAATCCCCTGGTACTTCTGGGCGGGCCTCTGCTT
CTACCTCGCCATCAGGCATCAAACCGACGGCTACGTGAAAGGGAGTCTAT
GCAAGGCTGCGGCTGATGGGAATTACGAGTTGGTCAAGAAGTTGCTGGTA
ATTAATCATGGTCAGTACGCGTTGGAGCTGGATGAGAAGgtgagttcacc
cgtcttgggtgacaggcgcagtttatgtaagcctttccgcctacctgcct
cccagcatttccctactatctcttctctgggtttttactgaggctacctg
tctgcttctctgacctctccctcccttcctccatccctagGGCTATTCTC
CTGTCATGCACGCCGCCCGTCGCGGGCACCTCCCCCTCGTCAAGCTCCTC
CTCTCCACCGGCCTCTACGACCCTCGAAATTTGTCGGCTAAATCCCGCTC
TGGTAAAAGCGCTCTTTTTTTAGCAGCTCAAGCCAACCACGAGCAGATTG
TGAGATTACTACTGGAGAGAGGGGCGGACCCGGCAGGTTTGATGCAAGAC
ACTTGGTTTCAACGGTTTCTGCCTTTCATTGCTGCCTTAAACAGCAGCAG
CAGCAGCAGCAGTGGCAGCAGAGGAGGGACGAGGATAAGACCAGTGAGAC
GACCTTCAGGAAGTTCAGCGGCTCCCCCCAGCTACTGGGTACCTGGAACC
TCACCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCGCA
GCAGCAGCGGCGTGTGACTCCACCGTCTTCAGCCCCCGTAGCCATGCCAG
TCGCAGTTGCTCTCTCCCCTTCCGCTTCCCACGAGTCACTTTCCTCTTTC
CCACCCTCCTTCTCATCGTCCTCCTCAGCGCCACCCGTGGCGACGGCCAC
AGGAGGGGGGGTTGGAGGGAGCACGAGGAGGAGCTACCGCCATTGCCGCA
GGGCTGGGAGGAGAGAGTGACAGAGGAGGGGTATACTTTCTATCTGAATC
ACAATGAGAAGACGACGAGCTGGGAGAGGCCTGTGCCGCGCATGTATGGA
TAGAGAAGGTGAT back to topprotein sequence of NO18G01780.1 >NO18G01780.1-protein ID=NO18G01780.1-protein|Name=NO18G01780.1|organism=Nannochloropsis oceanica|type=polypeptide|length=372bp
MVPTGSRAALSSILTKRHHLTFFGAPNARKTSSLLIPTLKPTSTRTHLTQ
QKIVSSIMDLLIELGLAFGLASLLLALAPFYYMFITLAMLLGVLLLLAGV
LDPFEIPWYFWAGLCFYLAIRHQTDGYVKGSLCKAAADGNYELVKKLLVI
NHGQYALELDEKGYSPVMHAARRGHLPLVKLLLSTGLYDPRNLSAKSRSG
KSALFLAAQANHEQIVRLLLERGADPAGLMQDTWFQRFLPFIAALNSSSS
SSSGSRGGTRIRPVRRPSGSSAAPPSYWVPGTSPSSSSSSSSSSSSSSQQ
QRRVTPPSSAPVAMPVAVALSPSASHESLSSFPPSFSSSSSAPPVATATG
GGVGGSTRRSYRHCRRAGRRE* back to top
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