NO18G01780.1, NO18G01780.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO18G01780.1
Unique NameNO18G01780.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4061
Alignment locationchr18:556233..560595 -

Link to JBrowse

Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr18genomechr18:556233..560595 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
[Close]
BLAST of NO18G01780.1 vs.
Match: EWM23384.1 (cortactin-binding protein 2 [Nannochloropsis gaditana])

HSP 1 Score: 271.2 bits (692), Expect = 4.900e-69
Identity = 169/294 (57.48%), Postives = 195/294 (66.33%), Query Frame = 0 
Query:   58 MDLLIELGLAFGLASLLLALAPFYYMFITLAMLLGVLLLLAGVLDPFEIPWYFWAGLCFYLAIRHQTDGYVKGSLCKAAADGNYELVKKLLVINHGQYALELDEKGYSPVMHAARRGHLPLVKLLLSTGLYDPRNLSAKSRSGKSALFLAAQANHEQIVRLLLERGADPAGLMQDTWFQRFLPFIAALNSSSSSSSGSRGGTRIRPVRRPSGSSAAPPSYWVPGTSPSSSSSSSSSSSSSSQQQRRVTPPSSAPVAMPVAVALSPSASHESLSSFPPSFSSSSSAPPVATATGG 352
            MDL IELGL  GLASLLL ++      +TL++LLG LLLLAGVL+PFEIPWY WA LC YLA+RHQ  GY KGSLCKAAADGN  LV+KLL +NHGQYALELD KGYSP+MHAARRG LP+V+LLL+T LYD  N+S KSRSGKSALFLAAQA  E +VRLLLE GADPAGL +D+W QRFLPF+ A    +S      G    R  RRP      PP Y  P   P    SS  +SS             S P A+PVAVAL PSA   S      +F+ +S +P +    GG
Sbjct:    1 MDLFIELGLLVGLASLLLVVSSINATLVTLSLLLGCLLLLAGVLEPFEIPWYVWAALCLYLAVRHQGSGYTKGSLCKAAADGNIALVRKLLAVNHGQYALELDHKGYSPLMHAARRGDLPMVRLLLATNLYDAHNVSIKSRSGKSALFLAAQAKQEAMVRLLLEHGADPAGLARDSWAQRFLPFLTA--PPASQRPIPAGPQPRRRARRP-----PPPDY--PDVHPGPQPSSWQASS------------CSPPKAIPVAVALPPSAPPAS------TFAHASVSPGIVREGGG 267
The following BLAST results are available for this feature:
BLAST of NO18G01780.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
EWM23384.14.900e-6957.48cortactin-binding protein 2 [Nannochloropsis gadit... [more]
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO18G01780NO18G01780Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO18G01780.1NO18G01780.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO18G01780.1.cds1NO18G01780.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO18G01780.1.cds2NO18G01780.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO18G01780.1.cds3NO18G01780.1.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO18G01780.1 ID=NO18G01780.1|Name=NO18G01780.1|organism=Nannochloropsis oceanica|type=mRNA|length=4061bp
GGAGGAGGAGGAGGAGGAGGAGAGAGGCGAGCAAGGCGCCGGCTGGTCTC
TTCATGGATTTGCCGGAGGATGCACGGGCGAAATCCAAGGGAGGGGGGGC
GGGAGGAAGGGAAGGAGGAAAGGCCCGCATCACGCAACCACAGGACCTCC
CGCATCATGTCCACCACATGCACCACCATTGCCACCTCCCGCCTGTCCTC
CTCCTCTTCCTCCTTCCCCATCCTCTCTAGCTCCTCCAGCGACCTCCTTC
CTGTCTGTGCTCTTGCTCTCCTTCCCCCCCTTCCTCGAGCCCTCCCTCGC
TCAATCCCTTCCACCACCCGGCAGCGCCAACGCCGAGCTTCCAGCACACG
TTCCAGGTGTTCTCTTGACACGAACAAAGGGGCTAGCCCTCCTCCTCCTC
CTATTCCTCCTCCTCCTCCCTCCCTGCCTTCTTCTCCTCCTCCGTCCCCT
CCTCTCTCGTTTTCGCCCGCCTGTAGCTTCACCGACGAGGAGGACGAGGA
TGAAGAAGGGGGAGAGGAAGGGAGCGAAGAAGGGCTCGCGAACAAGCCCA
AGATCTGCCCACCCAGCAGCGACAGCGTTGATGCATACCACCGGGCCTGC
TGTCCCAGTCGCTCCTCCCCTCCTCCCTCCCTCCCTCCCTGGAACTCCCA
CACGCCCGTGTAAAGGAAAGCAAGGCGGCCTAGAGCTTGAAGGAGGGCGG
GATGCACAGACCATGTGCCGGGGGAGGACGAGGAAGGGAGGGTGGAAGGG
GTGGACGAGGAGAGGGGAGTGAAGAGGAGGAGGCCTTGATTGTGAAGGGA
GGTGAGGAGAAGGAGGGCAGCCGCGGCGGCAACGGAGAAGGAGGGGAAGC
AGGAAGAACTCCCCCCGCTGTCGGCTTTGCTCTTGTCCTTACTGCTGCTG
CTGCTGCTGGCGTTGTCGTCAAGGGAGAGGGAGAAGGCGTAGACGGGCCC
CTGCTTGTCGACGAGGCGGAAGTAGTGACGACAGGACGAAAAGGGGGGAG
GAGAAGGCATGGAAGGAGGAATCGGAGGACGAAAAGGGGGGAAGAAGGAT
ATATGAGCGTCGTTTCCCTCCTCTTGCTCTTGCTGCTGCTGCTGCGCCAG
GAGAAGGAGGAGGACCCAGACCATGGAAGGCGCAACCAATCGCTGTTGCT
GTTGCTGCTGTAGATACTCGTGGAGACATACGTCTCCAGTGACAGCGGCA
GGATGAGCACCAGAAGCAGCACAACCCTTGTTTTCCCGCTTCGCCTTAAC
TCTTTTGGATTCAGGGAGCGGGAGGGAGGGCGGGAGGGAGGGCAGCTTCC
CCGTGACAAGTAGGATCCCTAAGACTGCTTTTTCCGCCCAAGAACACGCT
TGGAGAGAAGAGAGGGCTATTTGTTGTGAGGGAGTGAAGAGAAGACGGCT
ACAGGAGGAGGGGGAGAAGGAGGAGAAAGGGGTATGGAGGGAAGAAGAGG
GGGAGGGGGAGTAGTAGTCGAGCAGCAGCTGCAGGCCTGGCAGGGGGTTG
GTGAGGGCCATGGAGGAAGGGGGGGAGGGAGAGAGGAAGGAAGGGAGGGT
AATGCTGACGGGGCTCTTGAACGAAGCTTTGAGAGAATTGTCAGCGCTGC
TTTTGCTGCTTTTGCTGCTCTTTCTGCTGATGCTGCTGTTGCTCAGACGG
GCGAGGAGGAGGTGCCAGTGGCCTGCGAGCTGTAGAGGTGGAGAGGGATC
AGACGAAGGAGAAGGAGAAGAAGAAGGAGAGGGGGAGGGCAACTGCCAGT
GTAGCGCAAAGTCAGATCGATCTGTTCCTATTGTTGGCGGTGATTGAATT
GGTGCTCCTGATACTGGTGCTGCTGCTGCTGCTGCCGCTGCTGCTATATC
GCACGGGTTCGGCGGAAGCTCAGCCACTAATAAAGTGATATCCCCTTGAC
CAGGCTGAGATGAAGCCATCCCTAAAAATACAAAGGGTCGACGTGGTGGC
TTGGGGGGCTTAGATTTTGATTGTTCTTTCTGTGGCTCTCGCTGCTGCTG
TTGTTGCTCCTTTTGGTGGCCCTGGCCCATATTCATGGAACTACAGGCAT
CAGTGGTGGTGGTGAGTGCAATTGTTGCATCTCGCTGTCCCACGGATGGC
ACCGATTGTACTGATGAAGAAGAGGCGATTACTACGGTAGTATTAACGCG
CGAGTAAGATGCTGGTGCTGGTGATGGTGCTGGTGCTGTTACTGCTACAG
TTGCTGCTACAGACGGTGATGACGATAAAGGAAGTGGTCGTGTTTGCGTC
GCTCGTCGTGCTGCTACTGGCGATGCTACGCAATGCAATGATGCAGGCTC
TGGAACAGCTGCCGGGGAATTCACTAACGCATGATGAGGAGGAGGAATGG
TACCGCCAATAGGTGGAGGGGGGGAGGGGTATAGCGTACAGCGTGCCGGA
GGAGCACGGGACCAAGGATCTAGACGCCAGGACATGGCAATATCATTCAA
ACGCTGCTTTGTCGACTCGGGAAGTGGGTGATTAATACTGGCATGAAGGG
CCAAACGGGCTCGAGCGCGGGGTCCTGGCCCGCCCGGAGGGAGGTGCCAA
ATGGAGGTGGAGGAACAGGCAGAGGTAGCTGGATGCAAAAGGCGCTTTTT
GCTGTCGGTGGGAGGTGGCGGCGCCGAATCATTGTGGGAACGCCGATCCT
TGTCCATCTGAATCTGGAAAAGGGTTTGCAGGGATGAGTTTGACTGGGTA
AGACTATGGTTAACGCATGCGGCGTTGAAGGAGAGATGTGCACGTTTCAA
TCGGCGAATTAAGTCATGGTTTTTAACCTACAGCCTTCTTGACGGGGTAA
AGAGCCGTCGCACTTACGCAAACTTTACCCTGACACGCGTGAGATAGTGG
TAATGGTACCCACCGGGAGCAGAGCAGCATTGAGCAGCATTCTTACCAAG
CGTCATCACTTGACTTTTTTTGGCGCACCGAACGCAAGGAAAACCTCCTC
CCTCCTCATTCCCACTCTCAAACCCACATCCACACGCACCCACTTGACAC
AACAAAAGATCGTCAGCAGCATAATGGACCTCCTCATCGAGTTGGGCCTG
GCATTTGGCCTGGCTTCTCTCCTTTTGGCACTCGCCCCTTTCTACTACAT
GTTCATCACGCTCGCCATGCTCCTAGGGGTCCTCCTCCTGCTGGCCGGTG
TTCTGGATCCCTTCGAAATCCCCTGGTACTTCTGGGCGGGCCTCTGCTTC
TACCTCGCCATCAGGCATCAAACCGACGGCTACGTGAAAGGGAGTCTATG
CAAGGCTGCGGCTGATGGGAATTACGAGTTGGTCAAGAAGTTGCTGGTAA
TTAATCATGGTCAGTACGCGTTGGAGCTGGATGAGAAGGGCTATTCTCCT
GTCATGCACGCCGCCCGTCGCGGGCACCTCCCCCTCGTCAAGCTCCTCCT
CTCCACCGGCCTCTACGACCCTCGAAATTTGTCGGCTAAATCCCGCTCTG
GTAAAAGCGCTCTTTTTTTAGCAGCTCAAGCCAACCACGAGCAGATTGTG
AGATTACTACTGGAGAGAGGGGCGGACCCGGCAGGTTTGATGCAAGACAC
TTGGTTTCAACGGTTTCTGCCTTTCATTGCTGCCTTAAACAGCAGCAGCA
GCAGCAGCAGTGGCAGCAGAGGAGGGACGAGGATAAGACCAGTGAGACGA
CCTTCAGGAAGTTCAGCGGCTCCCCCCAGCTACTGGGTACCTGGAACCTC
ACCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCGCAGC
AGCAGCGGCGTGTGACTCCACCGTCTTCAGCCCCCGTAGCCATGCCAGTC
GCAGTTGCTCTCTCCCCTTCCGCTTCCCACGAGTCACTTTCCTCTTTCCC
ACCCTCCTTCTCATCGTCCTCCTCAGCGCCACCCGTGGCGACGGCCACAG
GAGGGGGGGTTGGAGGGAGCACGAGGAGGAGCTACCGCCATTGCCGCAGG
GCTGGGAGGAGAGAGTGACAGAGGAGGGGTATACTTTCTATCTGAATCAC
AATGAGAAGACGACGAGCTGGGAGAGGCCTGTGCCGCGCATGTATGGATA
GAGAAGGTGAT
back to top

protein sequence of NO18G01780.1

>NO18G01780.1-protein ID=NO18G01780.1-protein|Name=NO18G01780.1|organism=Nannochloropsis oceanica|type=polypeptide|length=372bp
MVPTGSRAALSSILTKRHHLTFFGAPNARKTSSLLIPTLKPTSTRTHLTQ
QKIVSSIMDLLIELGLAFGLASLLLALAPFYYMFITLAMLLGVLLLLAGV
LDPFEIPWYFWAGLCFYLAIRHQTDGYVKGSLCKAAADGNYELVKKLLVI
NHGQYALELDEKGYSPVMHAARRGHLPLVKLLLSTGLYDPRNLSAKSRSG
KSALFLAAQANHEQIVRLLLERGADPAGLMQDTWFQRFLPFIAALNSSSS
SSSGSRGGTRIRPVRRPSGSSAAPPSYWVPGTSPSSSSSSSSSSSSSSQQ
QRRVTPPSSAPVAMPVAVALSPSASHESLSSFPPSFSSSSSAPPVATATG
GGVGGSTRRSYRHCRRAGRRE*
back to top

mRNA from alignment at chr18:556233..560595-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO18G01780.1 ID=NO18G01780.1|Name=NO18G01780.1|organism=Nannochloropsis oceanica|type=mRNA|length=4363bp|location=Sequence derived from alignment at chr18:556233..560595- (Nannochloropsis oceanica)
GGAGGAGGAGGAGGAGGAGGAGAGAGGCGAGCAAGGCGCCGGCTGGTCTC
TTCATGGATTTGCCGGAGGATGCACGGGCGAAATCCAAGGGAGGGGGGGC
GGGAGGAAGGGAAGGAGGAAAGGCCCGCATCACGCAACCACAGGACCTCC
CGCATCATGTCCACCACATGCACCACCATTGCCACCTCCCGCCTGTCCTC
CTCCTCTTCCTCCTTCCCCATCCTCTCTAGCTCCTCCAGCGACCTCCTTC
CTGTCTGTGCTCTTGCTCTCCTTCCCCCCCTTCCTCGAGCCCTCCCTCGC
TCAATCCCTTCCACCACCCGGCAGCGCCAACGCCGAGCTTCCAGCACACG
TTCCAGGTGTTCTCTTGACACGAACAAAGGGGCTAGCCCTCCTCCTCCTC
CTATTCCTCCTCCTCCTCCCTCCCTGCCTTCTTCTCCTCCTCCGTCCCCT
CCTCTCTCGTTTTCGCCCGCCTGTAGCTTCACCGACGAGGAGGACGAGGA
TGAAGAAGGGGGAGAGGAAGGGAGCGAAGAAGGGCTCGCGAACAAGCCCA
AGATCTGCCCACCCAGCAGCGACAGCGTTGATGCATACCACCGGGCCTGC
TGTCCCAGTCGCTCCTCCCCTCCTCCCTCCCTCCCTCCCTGGAACTCCCA
CACGCCCGTGTAAAGGAAAGCAAGGCGGCCTAGAGCTTGAAGGAGGGCGG
GATGCACAGACCATGTGCCGGGGGAGGACGAGGAAGGGAGGGTGGAAGGG
GTGGACGAGGAGAGGGGAGTGAAGAGGAGGAGGCCTTGATTGTGAAGGGA
GGTGAGGAGAAGGAGGGCAGCCGCGGCGGCAACGGAGAAGGAGGGGAAGC
AGGAAGAACTCCCCCCGCTGTCGGCTTTGCTCTTGTCCTTACTGCTGCTG
CTGCTGCTGGCGTTGTCGTCAAGGGAGAGGGAGAAGGCGTAGACGGGCCC
CTGCTTGTCGACGAGGCGGAAGTAGTGACGACAGGACGAAAAGGGGGGAG
GAGAAGGCATGGAAGGAGGAATCGGAGGACGAAAAGGGGGGAAGAAGGAT
ATATGAGCGTCGTTTCCCTCCTCTTGCTCTTGCTGCTGCTGCTGCGCCAG
GAGAAGGAGGAGGACCCAGACCATGGAAGGCGCAACCAATCGCTGTTGCT
GTTGCTGCTGTAGATACTCGTGGAGACATACGTCTCCAGTGACAGCGGCA
GGATGAGCACCAGAAGCAGCACAACCCTTGTTTTCCCGCTTCGCCTTAAC
TCTTTTGGATTCAGGGAGCGGGAGGGAGGGCGGGAGGGAGGGCAGCTTCC
CCGTGACAAGTAGGATCCCTAAGACTGCTTTTTCCGCCCAAGAACACGCT
TGGAGAGAAGAGAGGGCTATTTGTTGTGAGGGAGTGAAGAGAAGACGGCT
ACAGGAGGAGGGGGAGAAGGAGGAGAAAGGGGTATGGAGGGAAGAAGAGG
GGGAGGGGGAGTAGTAGTCGAGCAGCAGCTGCAGGCCTGGCAGGGGGTTG
GTGAGGGCCATGGAGGAAGGGGGGGAGGGAGAGAGGAAGGAAGGGAGGGT
AATGCTGACGGGGCTCTTGAACGAAGCTTTGAGAGAATTGTCAGCGCTGC
TTTTGCTGCTTTTGCTGCTCTTTCTGCTGATGCTGCTGTTGCTCAGACGG
GCGAGGAGGAGGTGCCAGTGGCCTGCGAGCTGTAGAGGTGGAGAGGGATC
AGACGAAGGAGAAGGAGAAGAAGAAGGAGAGGGGGAGGGCAACTGCCAGT
GTAGCGCAAAGTCAGATCGATCTGTTCCTATTGTTGGCGGTGATTGAATT
GGTGCTCCTGATACTGGTGCTGCTGCTGCTGCTGCCGCTGCTGCTATATC
GCACGGGTTCGGCGGAAGCTCAGCCACTAATAAAGTGATATCCCCTTGAC
CAGGCTGAGATGAAGCCATCCCTAAAAATACAAAGGGTCGACGTGGTGGC
TTGGGGGGCTTAGATTTTGATTGTTCTTTCTGTGGCTCTCGCTGCTGCTG
TTGTTGCTCCTTTTGGTGGCCCTGGCCCATATTCATGGAACTACAGGCAT
CAGTGGTGGTGGTGAGTGCAATTGTTGCATCTCGCTGTCCCACGGATGGC
ACCGATTGTACTGATGAAGAAGAGGCGATTACTACGGTAGTATTAACGCG
CGAGTAAGATGCTGGTGCTGGTGATGGTGCTGGTGCTGTTACTGCTACAG
TTGCTGCTACAGACGGTGATGACGATAAAGGAAGTGGTCGTGTTTGCGTC
GCTCGTCGTGCTGCTACTGGCGATGCTACGCAATGCAATGATGCAGGCTC
TGGAACAGCTGCCGGGGAATTCACTAACGCATGATGAGGAGGAGGAATGG
TACCGCCAATAGGTGGAGGGGGGGAGGGGTATAGCGTACAGCGTGCCGGA
GGAGCACGGGACCAAGGATCTAGACGCCAGGACATGGCAATATCATTCAA
ACGCTGCTTTGTCGACTCGGGAAGTGGGTGATTAATACTGGCATGAAGGG
CCAAACGGGCTCGAGCGCGGGGTCCTGGCCCGCCCGGAGGGAGGTGCCAA
ATGGAGGTGGAGGAACAGGCAGAGGTAGCTGGATGCAAAAGGCGCTTTTT
GCTGTCGGTGGGAGGTGGCGGCGCCGAATCATTGTGGGAACGCCGATCCT
TGTCCATCTGAATCTGGAAAAGGGTTTGCAGGGATGAGTTTGACTGGGTA
AGACTATGGTTAACGCATGCGGCGTTGAAGGAGAGATGTGCACGTTTCAA
TCGGCGAATTAAGTCATGGTTTTTAACCTACAGCCTTCTTGACGGGGTAA
AGAGCCGTCGCACTTACGCAAACTTTACCCTGACACGCGTGAGATAGTGG
TAATGGTACCCACCGGGAGCAGAGCAGCATTGAGCAGCATTCTTACCAAG
CGTCATCACTTGACTTTTTTTGGCGCACCGAACGCAAGGAAAACCTCCTC
CCTCCTCATTCCCACTCTCAAACCCACATCCACACGCACCCACTTGACAC
AACAAAAGATCGTCAGCAGCATAATGGACCTCCTCATCGAGTTGGGCCTG
GCATTTGGCCTGGCTTCTCTCCTTTTGGCACTCGCCCCTTTCTACTACAT
GTTCATCACGCTCGCCATGCTCCTAGGGGTCCTCCTCCTGCTGGCCGGTG
TTCTGGGTACGTTGATTATTTCCATGGTACAAAAGGTGGCTATGCACCCT
TGCCCGTTGATGGTAGATAAAGGCATAATTATAGAGGTCTTGCGTTCCAT
GTATTCGCTCTTCCCCACCTGGACGCTCCCCCCTTTCTCTCTCTCCCTCC
CTTCTAGATCCCTTCGAAATCCCCTGGTACTTCTGGGCGGGCCTCTGCTT
CTACCTCGCCATCAGGCATCAAACCGACGGCTACGTGAAAGGGAGTCTAT
GCAAGGCTGCGGCTGATGGGAATTACGAGTTGGTCAAGAAGTTGCTGGTA
ATTAATCATGGTCAGTACGCGTTGGAGCTGGATGAGAAGGTGAGTTCACC
CGTCTTGGGTGACAGGCGCAGTTTATGTAAGCCTTTCCGCCTACCTGCCT
CCCAGCATTTCCCTACTATCTCTTCTCTGGGTTTTTACTGAGGCTACCTG
TCTGCTTCTCTGACCTCTCCCTCCCTTCCTCCATCCCTAGGGCTATTCTC
CTGTCATGCACGCCGCCCGTCGCGGGCACCTCCCCCTCGTCAAGCTCCTC
CTCTCCACCGGCCTCTACGACCCTCGAAATTTGTCGGCTAAATCCCGCTC
TGGTAAAAGCGCTCTTTTTTTAGCAGCTCAAGCCAACCACGAGCAGATTG
TGAGATTACTACTGGAGAGAGGGGCGGACCCGGCAGGTTTGATGCAAGAC
ACTTGGTTTCAACGGTTTCTGCCTTTCATTGCTGCCTTAAACAGCAGCAG
CAGCAGCAGCAGTGGCAGCAGAGGAGGGACGAGGATAAGACCAGTGAGAC
GACCTTCAGGAAGTTCAGCGGCTCCCCCCAGCTACTGGGTACCTGGAACC
TCACCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCGCA
GCAGCAGCGGCGTGTGACTCCACCGTCTTCAGCCCCCGTAGCCATGCCAG
TCGCAGTTGCTCTCTCCCCTTCCGCTTCCCACGAGTCACTTTCCTCTTTC
CCACCCTCCTTCTCATCGTCCTCCTCAGCGCCACCCGTGGCGACGGCCAC
AGGAGGGGGGGTTGGAGGGAGCACGAGGAGGAGCTACCGCCATTGCCGCA
GGGCTGGGAGGAGAGAGTGACAGAGGAGGGGTATACTTTCTATCTGAATC
ACAATGAGAAGACGACGAGCTGGGAGAGGCCTGTGCCGCGCATGTATGGA
TAGAGAAGGTGAT
back to top

Coding sequence (CDS) from alignment at chr18:556233..560595-

>NO18G01780.1 ID=NO18G01780.1|Name=NO18G01780.1|organism=Nannochloropsis oceanica|type=CDS|length=1116bp|location=Sequence derived from alignment at chr18:556233..560595- (Nannochloropsis oceanica)
ATGGTACCCACCGGGAGCAGAGCAGCATTGAGCAGCATTCTTACCAAGCG
TCATCACTTGACTTTTTTTGGCGCACCGAACGCAAGGAAAACCTCCTCCC
TCCTCATTCCCACTCTCAAACCCACATCCACACGCACCCACTTGACACAA
CAAAAGATCGTCAGCAGCATAATGGACCTCCTCATCGAGTTGGGCCTGGC
ATTTGGCCTGGCTTCTCTCCTTTTGGCACTCGCCCCTTTCTACTACATGT
TCATCACGCTCGCCATGCTCCTAGGGGTCCTCCTCCTGCTGGCCGGTGTT
CTGGATCCCTTCGAAATCCCCTGGTACTTCTGGGCGGGCCTCTGCTTCTA
CCTCGCCATCAGGCATCAAACCGACGGCTACGTGAAAGGGAGTCTATGCA
AGGCTGCGGCTGATGGGAATTACGAGTTGGTCAAGAAGTTGCTGGTAATT
AATCATGGTCAGTACGCGTTGGAGCTGGATGAGAAGGGCTATTCTCCTGT
CATGCACGCCGCCCGTCGCGGGCACCTCCCCCTCGTCAAGCTCCTCCTCT
CCACCGGCCTCTACGACCCTCGAAATTTGTCGGCTAAATCCCGCTCTGGT
AAAAGCGCTCTTTTTTTAGCAGCTCAAGCCAACCACGAGCAGATTGTGAG
ATTACTACTGGAGAGAGGGGCGGACCCGGCAGGTTTGATGCAAGACACTT
GGTTTCAACGGTTTCTGCCTTTCATTGCTGCCTTAAACAGCAGCAGCAGC
AGCAGCAGTGGCAGCAGAGGAGGGACGAGGATAAGACCAGTGAGACGACC
TTCAGGAAGTTCAGCGGCTCCCCCCAGCTACTGGGTACCTGGAACCTCAC
CCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCGCAGCAG
CAGCGGCGTGTGACTCCACCGTCTTCAGCCCCCGTAGCCATGCCAGTCGC
AGTTGCTCTCTCCCCTTCCGCTTCCCACGAGTCACTTTCCTCTTTCCCAC
CCTCCTTCTCATCGTCCTCCTCAGCGCCACCCGTGGCGACGGCCACAGGA
GGGGGGGTTGGAGGGAGCACGAGGAGGAGCTACCGCCATTGCCGCAGGGC
TGGGAGGAGAGAGTGA
back to top
Synonyms
Publications