NO18G01690, NO18G01690 (gene) Nannochloropsis oceanica

Overview
NameNO18G01690
Unique NameNO18G01690
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1623
Alignment locationchr18:538904..540526 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr18genomechr18:538904..540526 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO18G01690 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL008nonsL008Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR046ncniR046Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR043ngnoR043Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK004019NSK004019Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO18G01690.1NO18G01690.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO18G01690.1NO18G01690.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO18G01690 ID=NO18G01690|Name=NO18G01690|organism=Nannochloropsis oceanica|type=gene|length=1623bp
CTGCAGTCACGGTATCTTCAGTTTCCTACCTTTGGCTAGCAGTGTGCTGC
ATGGGCGGGTTGCTGGTGATTAATTCGAAAGGGATTGCTAAACACACCCG
ACTTACTACACCATCACGCCAACAGGCGGCAATAAATGATCATATAATTT
TAATGAGGAGGCATACCGTTGCCCACGAGCCACCAGACCACACATGCCTA
CACTCAACCTTTTCCCTCTACGCTCCCTTTCCGTTCAGGCACTGGCAGCC
CTCACGCTCCCATAAACGAGCCAGCAATGAAAATCACATCCACCACTTTT
GTCGCGGGCTGCTCCCTCCTCCTCCTCTGTCTAACTTGCACCCCTGAAAC
CGTGCGCGCGGACCAGGGCATGGACATGATGGACTTTGAGGTTCCTTCGG
GTGATGACATGATGGACGCGGAGGCGTCTAACGAGGTCTTCTTTCTCTTG
TCCGAGAAAGTTGgtacgtatttctttattcaatgtcccgtgcctgaacg
ttgtcctcccatctcgtctctctatcttgccatttctcttctctatcctc
tcagatcatgctgtctgccctcttttgccttttccccactcccttgcttc
cctgctgtttccttgccaaatcgcatcccacatttgaccagctatttctc
atcgcttcccatccaacgcacacacaataaagCTGCCTTGACCACTGCGG
AGGCCACCGTTCTCTCCCTCGAAGAGCAGCTCAAGGCCTCCTCCGAAGAG
CTAGCGGACAAGGCCGAGCGCTTGTCCGCCTCGGAGAATGAAATCTCAGA
ACTATCAGAGCAAGTAAAAGAACTATCTTCCAAGCTGCTCAAGGGAGAGA
CCGCTGCGACCGTTGCAGCTACGAAGGGGGAAATGGCTGCCCTGACCAGC
GAGCTGGAGCAGGCCCAGGAGGAGGTGAGGGAACTCAGCGAGAAGGTCAA
GACCTTGGAAGCAACCGTGGCTGAGAGTGAATGGCAGGCAGAGAAGGCGG
AGGACGAGAAGCAGATCCTGCGGAAGGACCTGGCAGAAATGACTGAAGGG
AAAAGAGCAGCAGAGACGAGTTTGGATGGGGCGAAGGACGTGGCCGGATT
GGCATTCGATCGCGTCAAATATCTGGAAGGGCAGGTTGCGAAGGCAAAGA
GTGATGCAGTGACCGCCCGGAAGACGTGGGAGGAAGAATTGAGGTTGAAG
GACAAAGAGGTGGTGGAGACCAAGGCAAAGCTTCAAGATGCTATTGACAA
CAAATATTCATTCCGTGTCCTGTCGGAGGACTTGTCCGCCTGGTCGAAGA
AGGCACGGGCGGTGATGAAGATCTGGTGAGAGTTCAGCGACAGATGGGTG
GGGCTTGGGTGTAGGTCTGCAAAAAATTTCTTGAATGATTTGGACCTGTC
TTTATATAAAAGTGAGTGCGTAGGCAGTGGGAAGAAAAGTTACAGTTGAA
TGCAGACTCAAGAAAGAGGACAGCAGCAGTCAACCGGAGATTGTGAAGGG
AAAGTTGGAGAGGAAATTCGAAGAAATAGCTTTGGGGAACCTTTCATGAT
ACTGCAACTTTCGACAGTTCATGGGATTCATATACTTATTACTCAAAGAA
ACAAAAATGCCTCACTTTGACGA
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protein sequence of NO18G01690.1

>NO18G01690.1-protein ID=NO18G01690.1-protein|Name=NO18G01690.1|organism=Nannochloropsis oceanica|type=polypeptide|length=278bp
MKITSTTFVAGCSLLLLCLTCTPETVRADQGMDMMDFEVPSGDDMMDAEA
SNEVFFLLSEKVAALTTAEATVLSLEEQLKASSEELADKAERLSASENEI
SELSEQVKELSSKLLKGETAATVAATKGEMAALTSELEQAQEEVRELSEK
VKTLEATVAESEWQAEKAEDEKQILRKDLAEMTEGKRAAETSLDGAKDVA
GLAFDRVKYLEGQVAKAKSDAVTARKTWEEELRLKDKEVVETKAKLQDAI
DNKYSFRVLSEDLSAWSKKARAVMKIW*
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Synonyms
Publications