NO18G01490, NO18G01490 (gene) Nannochloropsis oceanica

Overview
NameNO18G01490
Unique NameNO18G01490
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length579
Alignment locationchr18:490600..491178 +

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Properties
Property NameValue
DescriptionDynamin switch motor protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr18genomechr18:490600..491178 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003924GTPase activity
GO:0005525GTP binding
GO:0016787hydrolase activity
GO:0000166nucleotide binding
Vocabulary: INTERPRO
TermDefinition
IPR020850GTPase_effector_domain_GED
IPR022812Dynamin_SF
IPR003130GED
Homology
[Close]
BLAST of NO18G01490 vs. NCBI_GenBank
Match: EWM23361.1 (dynamin switch motor protein [Nannochloropsis gaditana])

HSP 1 Score: 209.1 bits (531), Expect = 1.200e-50
Identity = 104/109 (95.41%), Postives = 109/109 (100.00%), Query Frame = 0 
Query:   84 MRYGDGPNDREKIETEIIKALTASYFDVVRKNFMDLVPKTIMYFLVNHAKDNLQNELVSNLYREDLIGESMRETADVAMRRKNSQEMRVLLQKALEIVNEVRDFNTFKL 193
            MRYGDGPNDREKIETEIIKALTASYFDVVRKNFMD+VPKTIMYFLVNHAKDNLQNELVSNLYR+DLIGESMRETADVAMRRKN+QEM++LLQKALEIVNEVRDFNTFKL
Sbjct:    1 MRYGDGPNDREKIETEIIKALTASYFDVVRKNFMDMVPKTIMYFLVNHAKDNLQNELVSNLYRDDLIGESMRETADVAMRRKNAQEMKLLLQKALEIVNEVRDFNTFKL 109
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BLAST of NO18G01490 vs. NCBI_GenBank
Match: GAX93135.1 (dynamin-2 [Pythium insidiosum])

HSP 1 Score: 178.3 bits (451), Expect = 2.200e-41
Identity = 89/118 (75.42%), Postives = 102/118 (86.44%), Query Frame = 0 
Query:   74 VVKLPQVPEVMRYGDGPNDREKIETEIIKALTASYFDVVRKNFMDLVPKTIMYFLVNHAKDNLQNELVSNLYREDLIGESMRETADVAMRRKNSQEMRVLLQKALEIVNEVRDFNTFK 192
            VVKLPQVP  MR  + P+DRE+IETEIIK+L ASYFD+VRKNF+DLVPK IM F+VNHAK+N+QNELVS LYRED +GE +RET DVA RR N  EMR+LLQ+ALEIVNEVRDFNTFK
Sbjct:  610 VVKLPQVPVSMRQSEEPSDRERIETEIIKSLLASYFDIVRKNFLDLVPKAIMNFMVNHAKENVQNELVSALYREDKLGELLRETGDVAARRSNCHEMRMLLQRALEIVNEVRDFNTFK 727
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BLAST of NO18G01490 vs. NCBI_GenBank
Match: XP_009829707.1 (hypothetical protein H257_06247 [Aphanomyces astaci] >ETV80760.1 hypothetical protein H257_06247 [Aphanomyces astaci])

HSP 1 Score: 176.0 bits (445), Expect = 1.100e-40
Identity = 85/118 (72.03%), Postives = 100/118 (84.75%), Query Frame = 0 
Query:   74 VVKLPQVPEVMRYGDGPNDREKIETEIIKALTASYFDVVRKNFMDLVPKTIMYFLVNHAKDNLQNELVSNLYREDLIGESMRETADVAMRRKNSQEMRVLLQKALEIVNEVRDFNTFK 192
            VVKLPQVP  MR GD P DRE+IETEIIK+L ASYFD+VRKNF+DLVPK+IM F+VNHAKD +QN+LVS LY+E+ +GE +RE+ D+A RR N  EMR LL KAL+IVNEVRDFNTFK
Sbjct:  569 VVKLPQVPSTMRQGDAPTDRERIETEIIKSLLASYFDIVRKNFLDLVPKSIMCFMVNHAKDQVQNQLVSTLYKEEKLGELLRESGDIASRRANCSEMRTLLSKALDIVNEVRDFNTFK 686
[Close]
BLAST of NO18G01490 vs. NCBI_GenBank
Match: XP_009540182.1 (hypothetical protein PHYSODRAFT_566888 [Phytophthora sojae] >EGZ04375.1 hypothetical protein PHYSODRAFT_566888 [Phytophthora sojae])

HSP 1 Score: 174.9 bits (442), Expect = 2.500e-40
Identity = 86/118 (72.88%), Postives = 99/118 (83.90%), Query Frame = 0 
Query:   74 VVKLPQVPEVMRYGDGPNDREKIETEIIKALTASYFDVVRKNFMDLVPKTIMYFLVNHAKDNLQNELVSNLYREDLIGESMRETADVAMRRKNSQEMRVLLQKALEIVNEVRDFNTFK 192
            VVKLPQVP  MR GD P DRE+IETEIIK+L ASYFD+VRKNF+DLVPK IM F+V H+K+N+QNELVS+LYRED + E + ET D+A RR N  EMR LLQ+ALEIVNEVRDFNTFK
Sbjct:  257 VVKLPQVPVSMRQGDDPTDRERIETEIIKSLLASYFDIVRKNFLDLVPKAIMCFMVGHSKENIQNELVSSLYREDKLSELLAETGDIAARRSNCDEMRTLLQRALEIVNEVRDFNTFK 374
[Close]
BLAST of NO18G01490 vs. NCBI_GenBank
Match: XP_009529892.1 (hypothetical protein PHYSODRAFT_560655 [Phytophthora sojae] >EGZ16143.1 hypothetical protein PHYSODRAFT_560655 [Phytophthora sojae])

HSP 1 Score: 174.9 bits (442), Expect = 2.500e-40
Identity = 86/118 (72.88%), Postives = 99/118 (83.90%), Query Frame = 0 
Query:   74 VVKLPQVPEVMRYGDGPNDREKIETEIIKALTASYFDVVRKNFMDLVPKTIMYFLVNHAKDNLQNELVSNLYREDLIGESMRETADVAMRRKNSQEMRVLLQKALEIVNEVRDFNTFK 192
            VVKLPQVP  MR GD P DRE+IETEIIK+L ASYFD+VRKNF+DLVPK IM F+V H+K+N+QNELVS+LYRED + E + ET D+A RR N  EMR LLQ+ALEIVNEVRDFNTFK
Sbjct:  591 VVKLPQVPVSMRQGDDPTDRERIETEIIKSLLASYFDIVRKNFLDLVPKAIMCFMVGHSKENIQNELVSSLYREDKLSELLAETGDIAARRSNCDEMRTLLQRALEIVNEVRDFNTFK 708
[Close]
BLAST of NO18G01490 vs. NCBI_GenBank
Match: XP_008910420.1 (hypothetical protein PPTG_15137 [Phytophthora parasitica INRA-310] >ETI39730.1 hypothetical protein F443_14709 [Phytophthora parasitica P1569] >ETK79845.1 hypothetical protein L915_14329 [Phytophthora parasitica] >ETL33264.1 hypothetical protein L916_14234 [Phytophthora parasitica] >ETL86551.1 hypothetical protein L917_14025 [Phytophthora parasitica] >ETN04493.1 hypothetical protein PPTG_15137 [Phytophthora parasitica INRA-310] >ETO68459.1 hypothetical protein F444_14714 [Phytophthora parasitica P1976] >ETP09590.1 hypothetical protein F441_14568 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 174.9 bits (442), Expect = 2.500e-40
Identity = 86/118 (72.88%), Postives = 99/118 (83.90%), Query Frame = 0 
Query:   74 VVKLPQVPEVMRYGDGPNDREKIETEIIKALTASYFDVVRKNFMDLVPKTIMYFLVNHAKDNLQNELVSNLYREDLIGESMRETADVAMRRKNSQEMRVLLQKALEIVNEVRDFNTFK 192
            VVKLPQVP  MR GD P DRE+IETEIIK+L ASYFD+VRKNF+DLVPK IM F+V H+K+N+QNELVS+LYRED + E + ET D+A RR N  EMR LLQ+ALEIVNEVRDFNTFK
Sbjct:  588 VVKLPQVPVSMRQGDDPTDRERIETEIIKSLLASYFDIVRKNFLDLVPKAIMCFMVGHSKENIQNELVSSLYREDKLNELLAETGDIAARRSNCDEMRTLLQRALEIVNEVRDFNTFK 705
[Close]
BLAST of NO18G01490 vs. NCBI_GenBank
Match: XP_002908808.1 (dynamin-2 [Phytophthora infestans T30-4] >EEY57622.1 dynamin-2 [Phytophthora infestans T30-4])

HSP 1 Score: 174.9 bits (442), Expect = 2.500e-40
Identity = 86/118 (72.88%), Postives = 99/118 (83.90%), Query Frame = 0 
Query:   74 VVKLPQVPEVMRYGDGPNDREKIETEIIKALTASYFDVVRKNFMDLVPKTIMYFLVNHAKDNLQNELVSNLYREDLIGESMRETADVAMRRKNSQEMRVLLQKALEIVNEVRDFNTFK 192
            VVKLPQVP  MR GD P DRE+IETEIIK+L ASYFD+VRKNF+DLVPK IM F+V H+K+N+QNELVS+LYRED + E + ET D+A RR N  EMR LLQ+ALEIVNEVRDFNTFK
Sbjct:  587 VVKLPQVPVSMRQGDDPTDRERIETEIIKSLLASYFDIVRKNFLDLVPKAIMCFMVGHSKENIQNELVSSLYREDKLNELLAETGDIAARRSNCDEMRTLLQRALEIVNEVRDFNTFK 704
[Close]
BLAST of NO18G01490 vs. NCBI_GenBank
Match: ETM39716.1 (hypothetical protein L914_14151 [Phytophthora parasitica] >KUF80179.1 Dynamin-1 protein [Phytophthora nicotianae] >KUF85120.1 Dynamin-1 protein [Phytophthora nicotianae] >KUF95365.1 hypothetical protein AM588_10010004 [Phytophthora nicotianae])

HSP 1 Score: 174.5 bits (441), Expect = 3.200e-40
Identity = 86/118 (72.88%), Postives = 99/118 (83.90%), Query Frame = 0 
Query:   74 VVKLPQVPEVMRYGDGPNDREKIETEIIKALTASYFDVVRKNFMDLVPKTIMYFLVNHAKDNLQNELVSNLYREDLIGESMRETADVAMRRKNSQEMRVLLQKALEIVNEVRDFNTFK 192
            VVKLPQVP  MR GD P DRE+IETEIIK+L ASYFD+VRKNF+DLVPK IM F+V H+K+N+QNELVS+LYRED + E + ET D+A RR N  EMR LLQ+ALEIVNEVRDFNTFK
Sbjct:  588 VVKLPQVPVSMRQGDEPTDRERIETEIIKSLLASYFDIVRKNFLDLVPKAIMCFMVGHSKENIQNELVSSLYREDKLNELLAETGDIAARRSNCDEMRTLLQRALEIVNEVRDFNTFK 705
[Close]
BLAST of NO18G01490 vs. NCBI_GenBank
Match: ETP37688.1 (hypothetical protein F442_14526 [Phytophthora parasitica P10297])

HSP 1 Score: 174.5 bits (441), Expect = 3.200e-40
Identity = 86/118 (72.88%), Postives = 99/118 (83.90%), Query Frame = 0 
Query:   74 VVKLPQVPEVMRYGDGPNDREKIETEIIKALTASYFDVVRKNFMDLVPKTIMYFLVNHAKDNLQNELVSNLYREDLIGESMRETADVAMRRKNSQEMRVLLQKALEIVNEVRDFNTFK 192
            VVKLPQVP  MR GD P DRE+IETEIIK+L ASYFD+VRKNF+DLVPK IM F+V H+K+N+QNELVS+LYRED + E + ET D+A RR N  EMR LLQ+ALEIVNEVRDFNTFK
Sbjct:  588 VVKLPQVPVSMRQGDEPTDRERIETEIIKSLLASYFDIVRKNFLDLVPKAIMCFMVGHSKENIQNELVSSLYREDKLNELLAETGDIAARRSNCDEMRTLLQRALEIVNEVRDFNTFK 705
[Close]
BLAST of NO18G01490 vs. NCBI_GenBank
Match: XP_024576875.1 (dynamin like protein [Plasmopara halstedii] >CEG40506.1 dynamin like protein [Plasmopara halstedii])

HSP 1 Score: 172.6 bits (436), Expect = 1.200e-39
Identity = 86/118 (72.88%), Postives = 99/118 (83.90%), Query Frame = 0 
Query:   74 VVKLPQVPEVMRYGDGPNDREKIETEIIKALTASYFDVVRKNFMDLVPKTIMYFLVNHAKDNLQNELVSNLYREDLIGESMRETADVAMRRKNSQEMRVLLQKALEIVNEVRDFNTFK 192
            VVKLPQVP  MR GD P DRE+IETEIIK+L ASYFD+VRKNF+DLVPK IM F+V H+K+N+QNELVS+LYRED + E + ET D+A RR N  EMR LLQ+ALEIVNEVRDFNTFK
Sbjct:  587 VVKLPQVPVNMRQGDDPTDRERIETEIIKSLLASYFDIVRKNFLDLVPKAIMCFMVVHSKENIQNELVSSLYREDKLTELLAETGDIAARRSNCDEMRTLLQRALEIVNEVRDFNTFK 704
The following BLAST results are available for this feature:
BLAST of NO18G01490 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM23361.11.200e-5095.41dynamin switch motor protein [Nannochloropsis gadi... [more]
GAX93135.12.200e-4175.42dynamin-2 [Pythium insidiosum][more]
XP_009829707.11.100e-4072.03hypothetical protein H257_06247 [Aphanomyces astac... [more]
XP_009540182.12.500e-4072.88hypothetical protein PHYSODRAFT_566888 [Phytophtho... [more]
XP_009529892.12.500e-4072.88hypothetical protein PHYSODRAFT_560655 [Phytophtho... [more]
XP_008910420.12.500e-4072.88hypothetical protein PPTG_15137 [Phytophthora para... [more]
XP_002908808.12.500e-4072.88dynamin-2 [Phytophthora infestans T30-4] >EEY57622... [more]
ETM39716.13.200e-4072.88hypothetical protein L914_14151 [Phytophthora para... [more]
ETP37688.13.200e-4072.88hypothetical protein F442_14526 [Phytophthora para... [more]
XP_024576875.11.200e-3972.88dynamin like protein [Plasmopara halstedii] >CEG40... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL008nonsL008Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR060ncniR060Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR043ngnoR043Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO18G01490.1NO18G01490.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_100057g20gene7094Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO18G01490.1NO18G01490.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO18G01490 ID=NO18G01490|Name=NO18G01490|organism=Nannochloropsis oceanica|type=gene|length=579bp
ATGAACAGCAGCAGCAGCGTTGGGATGGGCAGTAGCAGTGTCGCGAGTGG
CGTGGCAGCGGCCACGAGTGGTGGAGACAAGGGGGGAGGGATCATGTCGT
ACATTTTTGGGGCTCGGGCGCAGGGAGGGAATGGAGGAGCCGGGGGGGGG
TTGGGAGGAAGTGGGCGATTCGGAGGAGTAGGAGCGAGAGATGGGGGGAG
GGAGGGAGGGAGGGAGGCGGTGGTGAAGTTGCCGCAGGTCCCGGAGGTGA
TGAGGTATGGTGATGGGCCGAATGATCGGGAGAAGATTGAGACGGAGATT
ATCAAGGCCTTGACGGCGAGTTATTTTGATGTGGTCCGGAAGAATTTCAT
GGATTTGGTGCCTAAGACCATAATGTATTTCTTGGTGAACCATGCGAAGG
ATAATTTACAGAATGAGTTGGTTTCGAATTTGTACCGGGAGGATTTGATC
GGGGAGAGCATGCGAGAAACGGCGGACGTAGCGATGAGGCGCAAGAATTC
TCAGGAGATGCGGGTTTTGCTGCAGAAGGCCTTGGAGATTGTTAATGAGG
TCAGGGACTTCAATACATTTAAGCTATAA
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protein sequence of NO18G01490.1

>NO18G01490.1-protein ID=NO18G01490.1-protein|Name=NO18G01490.1|organism=Nannochloropsis oceanica|type=polypeptide|length=193bp
MNSSSSVGMGSSSVASGVAAATSGGDKGGGIMSYIFGARAQGGNGGAGGG
LGGSGRFGGVGARDGGREGGREAVVKLPQVPEVMRYGDGPNDREKIETEI
IKALTASYFDVVRKNFMDLVPKTIMYFLVNHAKDNLQNELVSNLYREDLI
GESMRETADVAMRRKNSQEMRVLLQKALEIVNEVRDFNTFKL*
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Synonyms
Publications