NO18G01370, NO18G01370 (gene) Nannochloropsis oceanica

Overview
NameNO18G01370
Unique NameNO18G01370
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1095
Alignment locationchr18:462271..463365 +

Link to JBrowse

Properties
Property NameValue
DescriptionL-iditol 2-dehydrogenase
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr18genomechr18:462271..463365 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO:0008152metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
GO:0005488binding
GO:0003824catalytic activity
Vocabulary: INTERPRO
TermDefinition
IPR036291NAD(P)-bd_dom_sf
IPR011032GroES-like
IPR013154ADH_GroES-like
IPR013149ADH_C
IPR020843PKS_ER
Homology
[Close]
BLAST of NO18G01370 vs. NCBI_GenBank
Match: EWM23374.1 (l-iditol 2-dehydrogenase [Nannochloropsis gaditana])

HSP 1 Score: 545.4 bits (1404), Expect = 1.300e-151
Identity = 269/353 (76.20%), Postives = 304/353 (86.12%), Query Frame = 0 
Query:   13 NPAIFLNGIDCMTIGHYALP-PLGAQDVRIAVKAVGICASDVHYLRKGRIADFIVKEPMVIGHESAGEVVAVGEAITALAVGDRVAMEPGISCQRCKPCKTGAYNLCPDMKFFATPPVHGSLAHFVHHPADLCFPLPSPLSYEDGAMCEPLAVGVYACIKANIRPGMRVLITGAGPIGLVTLLSARAFGASEIIITDVDERRLAIAAATAPGVKAVCVAGKITAEVLVMIGGPASVDVTMDCAGFETTVEVALEATTNGGKVLLIGMGCSTRTMHVPLLSAAVREVDLLGSFRYRNVYPTCLSLIESGRIDVRKLITHRVDLSGEGRFTAELVKEGFALSEKGGDVVKVMFNL 365
            NPA +L  I+ + + +Y LP PLG  DVRIA+KAVGICASDVHYLR+GRIADFIVKEPMVIGHESAGEVVAVG+ +T L VGDRVA+EPGI+CQRC  CKTGAYNLCPDM+FFATPPVHGSLA FV HPA+LCFPLP+ +SYE+GAMCEP AVGVYAC KA +RPG+R+LITGAGPIGLVTLL+ARAFGAS+IIITDVD RRLAIAA  APG + V V GK   EVL M+GG   VDVTMDCAGFE TVE+ALEAT NGGKVLLIGMGCSTR MH+PLL AA+REVDLLGSFRYRNVYP CL++I SG++D+++LITH  DLSG G FTAE V  GFALSE+GG+VVKVMF L
Sbjct:   47 NPAAYLLSINKIAVKNYELPSPLGEYDVRIAIKAVGICASDVHYLRRGRIADFIVKEPMVIGHESAGEVVAVGKKVTNLVVGDRVAIEPGIACQRCPQCKTGAYNLCPDMRFFATPPVHGSLARFVQHPANLCFPLPASISYEEGAMCEPFAVGVYACTKAKVRPGIRLLITGAGPIGLVTLLAARAFGASDIIITDVDRRRLAIAAEIAPGTRTVLVEGKAPTEVLHMVGGCGCVDVTMDCAGFEGTVELALEATANGGKVLLIGMGCSTRRMHIPLLPAAIREVDLLGSFRYRNVYPACLAMIASGKVDLKRLITHYKDLSGPGSFTAESVTSGFALSEQGGEVVKVMFTL 399
[Close]
BLAST of NO18G01370 vs. NCBI_GenBank
Match: XP_019413950.1 (PREDICTED: sorbitol dehydrogenase [Lupinus angustifolius] >OIV98930.1 hypothetical protein TanjilG_07365 [Lupinus angustifolius])

HSP 1 Score: 389.8 bits (1000), Expect = 9.200e-105
Identity = 206/355 (58.03%), Postives = 251/355 (70.70%), Query Frame = 0 
Query:   13 NPAIFLNGIDCMTIGHYALPPLGAQDVRIAVKAVGICASDVHYLRKGRIADFIVKEPMVIGHESAGEVVAVGEAITALAVGDRVAMEPGISCQRCKPCKTGAYNLCPDMKFFATPPVHGSLAHFVHHPADLCFPLPSPLSYEDGAMCEPLAVGVYACIKANIRPGMRVLITGAGPIGLVTLLSARAFGASEIIITDVDERRLAIAA-ATAPGVKAVCVAGKITAEVLVMI--GGPASVDVTMDCAGFETTVEVALEATTNGGKVLLIGMGCSTRTMHVPLLSAAVREVDLLGSFRYRNVYPTCLSLIESGRIDVRKLITHRVDLSGEGRFTAELVKEGFALSEKGGDVVKVMFNL 365
            N A +L  I+ + I  + LP +G  DVR+ VKAVGIC SDVHYL+  R ADFIVKEPMVIGHE AG +V VG  +T+L  GDRVA+EPGISC RC PCK G YNLCPDMKFFATPPVHGSLA+ + HPADLCF LP  +S E+GAMCEPL+VGV+AC +ANI P   VLI GAGPIGLVTLL+ARAFGA  I+I DVD+ RL++A    A  +  V    +  A+ ++ I     A +DVT+DCAGF  T+  AL AT  GGKV L+GMG S  T  VPL  AA REVD++G FRY+N +P CL  + SG+IDV+ LITHR        F+ + V+E F  S +GG+ +KVMFNL
Sbjct:   18 NMAAWLVAINTLKIQPFNLPSIGPHDVRVRVKAVGICGSDVHYLKTLRCADFIVKEPMVIGHECAGIIVEVGSQVTSLEPGDRVAIEPGISCWRCDPCKQGRYNLCPDMKFFATPPVHGSLANQIVHPADLCFKLPQNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTLLAARAFGAPRIVIVDVDDHRLSVAKNLGADDIVKVSTNIEDVADEVIQIHKAMGAGIDVTLDCAGFNKTMSTALNATQAGGKVCLVGMGHSIMT--VPLTPAAAREVDVIGIFRYKNTWPLCLEFLRSGKIDVKPLITHRFG------FSQKEVEEAFETSARGGNAIKVMFNL 364
[Close]
BLAST of NO18G01370 vs. NCBI_GenBank
Match: XP_003574877.1 (sorbitol dehydrogenase [Brachypodium distachyon] >KQJ99253.1 hypothetical protein BRADI_3g42030v3 [Brachypodium distachyon])

HSP 1 Score: 388.3 bits (996), Expect = 2.700e-104
Identity = 200/359 (55.71%), Postives = 252/359 (70.19%), Query Frame = 0 
Query:   13 NPAIFLNGIDCMTIGHYALPPLGAQDVRIAVKAVGICASDVHYLRKGRIADFIVKEPMVIGHESAGEVVAVGEAITALAVGDRVAMEPGISCQRCKPCKTGAYNLCPDMKFFATPPVHGSLAHFVHHPADLCFPLPSPLSYEDGAMCEPLAVGVYACIKANIRPGMRVLITGAGPIGLVTLLSARAFGASEIIITDVDERRLAIAAATAPGVKAVCVA--GKITAEV-----LVMIGGPASVDVTMDCAGFETTVEVALEATTNGGKVLLIGMGCSTRTMHVPLLSAAVREVDLLGSFRYRNVYPTCLSLIESGRIDVRKLITHRVDLSGEGRFTAELVKEGFALSEKGGDVVKVMFNL 365
            N A +L   D + I  + LPPLG  DVR+ +KAVGIC SDVHYL++ RIA F+VKEPMVIGHE AG +  VG  +T LA GDRVA+EPGISC RC+ CK G YNLC DMKFFATPP HGSLA  + HPADLCF LP  +S E+GAMCEPL+VGV+AC +A + P   VLI GAGPIGLVT+LSARAFGA  I++ DVDE RL++A +       V  A  G + AEV      +  GG   +DVT+DCAGF  ++  ALEAT  GG+V L+GMGC+  T  VPL SAA+REVD++G FRY++ +P C+  + SG++DV+ LITHR        F+ + V++ F +S +G D +KVMFNL
Sbjct:   14 NMAAWLVAKDTLKIMPFKLPPLGPYDVRVRMKAVGICGSDVHYLKEMRIAHFVVKEPMVIGHECAGVIEEVGAGVTQLAAGDRVALEPGISCWRCRHCKGGRYNLCADMKFFATPPYHGSLADQIVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRAEVGPEKGVLIMGAGPIGLVTMLSARAFGAPRIVVADVDEHRLSVARSLGADATVVVSAAEGDLAAEVERIQAAMGDGGGGEIDVTLDCAGFSKSMSTALEATRPGGRVCLVGMGCNQMT--VPLTSAAIREVDVVGIFRYKDTWPLCIEFLRSGKVDVKPLITHRFG------FSQKEVEDAFEVSARGRDAIKVMFNL 364
[Close]
BLAST of NO18G01370 vs. NCBI_GenBank
Match: XP_024165269.1 (sorbitol dehydrogenase [Rosa chinensis] >PRQ60017.1 putative oxidoreductase [Rosa chinensis])

HSP 1 Score: 388.3 bits (996), Expect = 2.700e-104
Identity = 205/355 (57.75%), Postives = 250/355 (70.42%), Query Frame = 0 
Query:   13 NPAIFLNGIDCMTIGHYALPPLGAQDVRIAVKAVGICASDVHYLRKGRIADFIVKEPMVIGHESAGEVVAVGEAITALAVGDRVAMEPGISCQRCKPCKTGAYNLCPDMKFFATPPVHGSLAHFVHHPADLCFPLPSPLSYEDGAMCEPLAVGVYACIKANIRPGMRVLITGAGPIGLVTLLSARAFGASEIIITDVDERRLAIAAAT-APGVKAVCVAGKITAEVLVMIGGP--ASVDVTMDCAGFETTVEVALEATTNGGKVLLIGMGCSTRTMHVPLLSAAVREVDLLGSFRYRNVYPTCLSLIESGRIDVRKLITHRVDLSGEGRFTAELVKEGFALSEKGGDVVKVMFNL 365
            N A +L GI+ + I  + LP LG  DVRI +KAVGIC SDVHYL+  R ADFIVKEPMVIGHE AG +  VG  +  LA GDRVA+EPGISC RC+ CK G YNLCPDMKFFATPPVHGSLA+ V HPADLCF LP  +S E+GAMCEPL+VGV+AC +AN+ P   VL+ GAGPIGLVTLL+ARAFGA  I+I DVD+ RL++A    A  +  V    +  AE +V IG    A VDVT DC GF+ T+   L AT  GGKV L+GMG    T+  PL SA+ REVD++G FRY+N +P CL  + SG+IDV+ LITHR        F+ + V++ FA S +GG+ +KVMFNL
Sbjct:   10 NMAAWLVGINTLKIQPFKLPDLGPHDVRIRMKAVGICGSDVHYLKAMRCADFIVKEPMVIGHECAGIIEEVGAEVKHLAPGDRVALEPGISCWRCESCKEGRYNLCPDMKFFATPPVHGSLANQVVHPADLCFKLPENVSLEEGAMCEPLSVGVHACRRANVGPETNVLVMGAGPIGLVTLLAARAFGAPRIVIVDVDDHRLSVAKTLGADEIVKVSTNIQDVAEEVVQIGKAMGAGVDVTFDCVGFDKTMSTGLRATRPGGKVCLVGMGHDAMTL--PLTSASAREVDVIGIFRYKNTWPLCLEFLRSGKIDVKPLITHRFG------FSQKEVEDAFATSARGGNAIKVMFNL 356
[Close]
BLAST of NO18G01370 vs. NCBI_GenBank
Match: XP_021765205.1 (sorbitol dehydrogenase-like [Chenopodium quinoa])

HSP 1 Score: 387.1 bits (993), Expect = 6.000e-104
Identity = 207/355 (58.31%), Postives = 247/355 (69.58%), Query Frame = 0 
Query:   13 NPAIFLNGIDCMTIGHYALPPLGAQDVRIAVKAVGICASDVHYLRKGRIADFIVKEPMVIGHESAGEVVAVGEAITALAVGDRVAMEPGISCQRCKPCKTGAYNLCPDMKFFATPPVHGSLAHFVHHPADLCFPLPSPLSYEDGAMCEPLAVGVYACIKANIRPGMRVLITGAGPIGLVTLLSARAFGASEIIITDVDERRLAIAAATAPG--VKAVCVAGKITAEV-LVMIGGPASVDVTMDCAGFETTVEVALEATTNGGKVLLIGMGCSTRTMHVPLLSAAVREVDLLGSFRYRNVYPTCLSLIESGRIDVRKLITHRVDLSGEGRFTAELVKEGFALSEKGGDVVKVMFNL 365
            N A +L GI+ + I  + LPPLG  DVRI +KAVGIC SDVHYL+  R ADFIVKEPMVIGHE AG +  VG  +  L  GDRVA+EPGISC RC  CK G YNLCP+MKFFATPPVHGSLA+ V HPADLCF LP  +S E+GAMCEPL+VG++AC +AN+ P    LI GAGPIGLVTLL+ARAFGA  I+I DVDE RL++A        VK       I  EV  +      SVDVT+DCAGF  T+  AL AT  GGKV LIGMG     M+VPL +AAVREVD++G FRY+N +P C+  + SG+IDV+ LITHR        F+ + V+E F  S +GGD +KVMFNL
Sbjct:   14 NMAAWLTGINTLKIQPFELPPLGPYDVRIKMKAVGICGSDVHYLKTLRCADFIVKEPMVIGHECAGIIEEVGSDVKTLVPGDRVALEPGISCWRCNVCKDGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPENVSLEEGAMCEPLSVGIHACRRANVGPETTTLIMGAGPIGLVTLLAARAFGAPRIVIVDVDEYRLSVAKKLGADETVKVSTDMQDIPEEVEQIRKAMGRSVDVTLDCAGFNKTLSTALRATGEGGKVCLIGMGHG--EMNVPLTAAAVREVDVVGVFRYKNTWPLCIDFLTSGKIDVKPLITHRFG------FSQKEVEEAFETSARGGDAIKVMFNL 360
[Close]
BLAST of NO18G01370 vs. NCBI_GenBank
Match: XP_021730162.1 (sorbitol dehydrogenase-like [Chenopodium quinoa])

HSP 1 Score: 387.1 bits (993), Expect = 6.000e-104
Identity = 207/355 (58.31%), Postives = 247/355 (69.58%), Query Frame = 0 
Query:   13 NPAIFLNGIDCMTIGHYALPPLGAQDVRIAVKAVGICASDVHYLRKGRIADFIVKEPMVIGHESAGEVVAVGEAITALAVGDRVAMEPGISCQRCKPCKTGAYNLCPDMKFFATPPVHGSLAHFVHHPADLCFPLPSPLSYEDGAMCEPLAVGVYACIKANIRPGMRVLITGAGPIGLVTLLSARAFGASEIIITDVDERRLAIAAATAPG--VKAVCVAGKITAEV-LVMIGGPASVDVTMDCAGFETTVEVALEATTNGGKVLLIGMGCSTRTMHVPLLSAAVREVDLLGSFRYRNVYPTCLSLIESGRIDVRKLITHRVDLSGEGRFTAELVKEGFALSEKGGDVVKVMFNL 365
            N A +L GI+ + I  + LPPLG  DVRI +KAVGIC SDVHYL+  R ADFIVKEPMVIGHE AG +  VG  +  L  GDRVA+EPGISC RC  CK G YNLCP+MKFFATPPVHGSLA+ V HPADLCF LP  +S E+GAMCEPL+VG++AC +AN+ P    LI GAGPIGLVTLL+ARAFGA  I+I DVDE RL++A        VK       I  EV  +      SVDVT+DCAGF  T+  AL AT  GGKV LIGMG     M+VPL +AAVREVD++G FRY+N +P C+  + SG+IDV+ LITHR        F+ + V+E F  S +GGD +KVMFNL
Sbjct:   14 NMAAWLTGINTLKIQPFQLPPLGPYDVRIKMKAVGICGSDVHYLKTLRCADFIVKEPMVIGHECAGIIEEVGSDVKTLVPGDRVALEPGISCWRCNVCKDGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGIHACRRANVGPETTALIMGAGPIGLVTLLAARAFGAPRIVIVDVDEYRLSVAKKLGADETVKVSTNMQDIPEEVEQIRKAMGRSVDVTLDCAGFNKTLSTALRATGEGGKVCLIGMGHG--EMNVPLTAAAVREVDVVGVFRYKNTWPLCIDFLTSGKIDVKPLITHRFG------FSQKEVEEAFETSARGGDAIKVMFNL 360
[Close]
BLAST of NO18G01370 vs. NCBI_GenBank
Match: XP_015650453.1 (PREDICTED: sorbitol dehydrogenase isoform X2 [Oryza sativa Japonica Group] >BAD09222.1 putative sorbitol dehydrogenase [Oryza sativa Japonica Group] >BAD09736.1 putative sorbitol dehydrogenase [Oryza sativa Japonica Group] >BAF24326.1 Os08g0545200 [Oryza sativa Japonica Group] >BAG88953.1 unnamed protein product [Oryza sativa Japonica Group] >BAG95098.1 unnamed protein product [Oryza sativa Japonica Group] >EEE69096.1 hypothetical protein OsJ_28161 [Oryza sativa Japonica Group] >BAT06532.1 Os08g0545200 [Oryza sativa Japonica Group])

HSP 1 Score: 386.3 bits (991), Expect = 1.000e-103
Identity = 203/358 (56.70%), Postives = 255/358 (71.23%), Query Frame = 0 
Query:   13 NPAIFLNGIDCMTIGHYALPPLGAQDVRIAVKAVGICASDVHYLRKGRIADFIVKEPMVIGHESAGEVVAVGEAITALAVGDRVAMEPGISCQRCKPCKTGAYNLCPDMKFFATPPVHGSLAHFVHHPADLCFPLPSPLSYEDGAMCEPLAVGVYACIKANIRPGMRVLITGAGPIGLVTLLSARAFGASEIIITDVDERRLAIA------AATAPGVKAVCVAGKITAEVLVMIGGPASVDVTMDCAGFETTVEVALEATTNGGKVLLIGMGCSTRTMHVPLLSAAVREVDLLGSFRYRNVYPTCLSLIESGRIDVRKLITHRVDLSGEGRFTAELVKEGFALSEKGGDVVKVMFNL 365
            N A +L   + + I  + LPP+G  DVR+ +KAVGIC SDVHYLR+ RIA F+VKEPMVIGHE AG +  VG  +T LAVGDRVA+EPGISC RC+ CK G YNLC DMKFFATPPVHGSLA+ + HP DLCF LP  +S E+GAMCEPL+VGV+AC +A++ P   VLI GAGPIGLVTLL+ARAFGA+ ++I DVDE RL++A      AA     +A  V G+    +   +GG   +DV++DCAGF  TV  ALEAT  GGKV L+GMG +  T  VPL SAA+REVD++G FRY++ +P C+  + SG+IDV+ LITHR        F+ E V+E F +S +G D +KVMFNL
Sbjct:   23 NMAAWLVAKNTLKIMPFKLPPVGPYDVRVRMKAVGICGSDVHYLREMRIAHFVVKEPMVIGHECAGVIEEVGSGVTHLAVGDRVALEPGISCWRCRHCKGGRYNLCEDMKFFATPPVHGSLANQIVHPGDLCFKLPENVSLEEGAMCEPLSVGVHACRRADVGPETGVLIMGAGPIGLVTLLAARAFGATRVVIVDVDEHRLSVARSLGADAAVRVSARAEDV-GEEVERIRAAMGG--DIDVSLDCAGFSKTVATALEATRGGGKVCLVGMGHNEMT--VPLTSAAIREVDVVGIFRYKDTWPLCIEFLRSGKIDVKPLITHRFG------FSQEDVEEAFEVSARGRDAIKVMFNL 369
[Close]
BLAST of NO18G01370 vs. NCBI_GenBank
Match: BAF75466.1 (NAD-dependent sorbitol dehydrogenase [Fragaria x ananassa])

HSP 1 Score: 386.3 bits (991), Expect = 1.000e-103
Identity = 204/355 (57.46%), Postives = 250/355 (70.42%), Query Frame = 0 
Query:   13 NPAIFLNGIDCMTIGHYALPPLGAQDVRIAVKAVGICASDVHYLRKGRIADFIVKEPMVIGHESAGEVVAVGEAITALAVGDRVAMEPGISCQRCKPCKTGAYNLCPDMKFFATPPVHGSLAHFVHHPADLCFPLPSPLSYEDGAMCEPLAVGVYACIKANIRPGMRVLITGAGPIGLVTLLSARAFGASEIIITDVDERRLAIAAAT-APGVKAVCVAGKITAEVLVMI--GGPASVDVTMDCAGFETTVEVALEATTNGGKVLLIGMGCSTRTMHVPLLSAAVREVDLLGSFRYRNVYPTCLSLIESGRIDVRKLITHRVDLSGEGRFTAELVKEGFALSEKGGDVVKVMFNL 365
            N A +L GI+ + I  + LP LG  DVRI +KAVGIC SDVHYL+  R+ADFIVKEPMVIGHE AG +  +G  +  L  GDRVA+EPGISC RC+ CK G YNLCPDM+FFATPPVHGSLA+ V HPADLCF LP  +S E+GAMCEPL+VGV+AC +AN+ P   VL+ GAGPIGLVTLL+ARAFGA  I+I DVD+ RL++A    A  +  V    +  AE +V I     A VDVT DCAGF+ T+  AL AT  GGKV L+GMG    T+  PL SA+ REVD++G FRY+N +P CL  + SG+IDV+ LITHR        F+ + V+E FA S  GG+ +KVMFNL
Sbjct:   15 NMAAWLVGINTLKIQPFKLPELGPYDVRIRMKAVGICVSDVHYLKAMRVADFIVKEPMVIGHECAGIIEGIGSEVKHLVPGDRVALEPGISCWRCESCKEGRYNLCPDMEFFATPPVHGSLANQVVHPADLCFKLPENVSLEEGAMCEPLSVGVHACRRANVGPETNVLVVGAGPIGLVTLLAARAFGAPRIVIADVDDHRLSVAKTLGADEIVKVSTNIQDVAEEVVQIRKAMGAGVDVTFDCAGFDKTMSTALRATRPGGKVCLVGMGHDAMTL--PLTSASAREVDVIGIFRYKNTWPLCLEFLRSGKIDVKPLITHRFG------FSQKEVEEAFATSACGGNAIKVMFNL 361
[Close]
BLAST of NO18G01370 vs. NCBI_GenBank
Match: XP_021617082.1 (sorbitol dehydrogenase [Manihot esculenta] >OAY48230.1 hypothetical protein MANES_06G142400 [Manihot esculenta])

HSP 1 Score: 386.0 bits (990), Expect = 1.300e-103
Identity = 204/355 (57.46%), Postives = 246/355 (69.30%), Query Frame = 0 
Query:   13 NPAIFLNGIDCMTIGHYALPPLGAQDVRIAVKAVGICASDVHYLRKGRIADFIVKEPMVIGHESAGEVVAVGEAITALAVGDRVAMEPGISCQRCKPCKTGAYNLCPDMKFFATPPVHGSLAHFVHHPADLCFPLPSPLSYEDGAMCEPLAVGVYACIKANIRPGMRVLITGAGPIGLVTLLSARAFGASEIIITDVDERRLAIAAATAPG--VKAVCVAGKITAE-VLVMIGGPASVDVTMDCAGFETTVEVALEATTNGGKVLLIGMGCSTRTMHVPLLSAAVREVDLLGSFRYRNVYPTCLSLIESGRIDVRKLITHRVDLSGEGRFTAELVKEGFALSEKGGDVVKVMFNL 365
            N A +L G++ + I  + LPPLG  DVR+A+KAVGIC SDVHYL+  R ADF+VKEPMVIGHE AG +  VG  +  L  GDRVA+EPGISC RC  CK G YNLCPDMKFFATPPVHGSLA+ V HPADLCF LP  +S E+GAMCEPL+VGV+AC +AN+ P   VL+ GAGPIGLVT+L+ARAFGA  I+I DVD+ RL++A        VK       ++ E VL+       VDVT DCAGF  T+  AL AT  GGKV L+GMG +  T  VPL  AA REVD++G FRY+N +P CL  + SG+IDV+ LITHR        FT E V+E F  S +GG  +KVMFNL
Sbjct:   18 NMAAWLLGVNTLKIQPFKLPPLGPHDVRVAMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGIIEEVGSEVKHLLPGDRVALEPGISCWRCNLCKEGRYNLCPDMKFFATPPVHGSLANQVVHPADLCFKLPENVSLEEGAMCEPLSVGVHACRRANVGPETNVLVMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKDLGADEIVKVSTNIQDVSEEAVLIHKAMGTGVDVTFDCAGFNKTMSTALSATRPGGKVCLVGMGHNEMT--VPLTPAAAREVDVIGVFRYKNTWPLCLEFLRSGKIDVKPLITHRFG------FTQEEVEEAFETSARGGSAIKVMFNL 364
[Close]
BLAST of NO18G01370 vs. NCBI_GenBank
Match: XP_012090335.1 (sorbitol dehydrogenase [Jatropha curcas] >KDP22337.1 hypothetical protein JCGZ_26168 [Jatropha curcas])

HSP 1 Score: 385.6 bits (989), Expect = 1.700e-103
Identity = 203/355 (57.18%), Postives = 249/355 (70.14%), Query Frame = 0 
Query:   13 NPAIFLNGIDCMTIGHYALPPLGAQDVRIAVKAVGICASDVHYLRKGRIADFIVKEPMVIGHESAGEVVAVGEAITALAVGDRVAMEPGISCQRCKPCKTGAYNLCPDMKFFATPPVHGSLAHFVHHPADLCFPLPSPLSYEDGAMCEPLAVGVYACIKANIRPGMRVLITGAGPIGLVTLLSARAFGASEIIITDVDERRLAIAA-ATAPGVKAVCVAGKITAEVLVMI--GGPASVDVTMDCAGFETTVEVALEATTNGGKVLLIGMGCSTRTMHVPLLSAAVREVDLLGSFRYRNVYPTCLSLIESGRIDVRKLITHRVDLSGEGRFTAELVKEGFALSEKGGDVVKVMFNL 365
            N A +L G+D + I  + LPPLG  DVR+ +KAVGIC SDVHYL+  R+ADF+VKEPMVIGHE AG +  VG  +  L  GDRVA+EPGISC RC  CK G YNLCP+MKFFATPPVHGSLA+ V HPADLCF LP  +S E+GAMCEPL+VGV+AC +AN+ P   VLI GAGPIGLVTLL+ARAFG   II+ DVD+ RL++A    A G+  V    +  AE + +I       VD+T DCAGF  T+  AL AT  GGKV L+GMG +  T  VPL SAA REVD++G FRY+N +P CL  ++SG+IDV+ LITHR        F+ + V+E F  S +GG  +KVMFNL
Sbjct:   19 NMAAWLLGVDNLKIQPFKLPPLGPYDVRVRMKAVGICGSDVHYLKTLRLADFVVKEPMVIGHECAGIIDEVGSEVKHLVRGDRVALEPGISCWRCNLCKEGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVLIMGAGPIGLVTLLAARAFGVPRIIVVDVDDYRLSVAKDLGADGIVKVSTNIQDVAEEVALIHKAMETGVDITFDCAGFNKTMSTALGATKQGGKVCLVGMGHNEMT--VPLTSAATREVDVIGVFRYKNTWPLCLEFLKSGKIDVKPLITHRFG------FSQKEVEEAFETSARGGSAIKVMFNL 365
The following BLAST results are available for this feature:
BLAST of NO18G01370 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM23374.11.300e-15176.20l-iditol 2-dehydrogenase [Nannochloropsis gaditana... [more]
XP_019413950.19.200e-10558.03PREDICTED: sorbitol dehydrogenase [Lupinus angusti... [more]
XP_003574877.12.700e-10455.71sorbitol dehydrogenase [Brachypodium distachyon] >... [more]
XP_024165269.12.700e-10457.75sorbitol dehydrogenase [Rosa chinensis] >PRQ60017.... [more]
XP_021765205.16.000e-10458.31sorbitol dehydrogenase-like [Chenopodium quinoa][more]
XP_021730162.16.000e-10458.31sorbitol dehydrogenase-like [Chenopodium quinoa][more]
XP_015650453.11.000e-10356.70PREDICTED: sorbitol dehydrogenase isoform X2 [Oryz... [more]
BAF75466.11.000e-10357.46NAD-dependent sorbitol dehydrogenase [Fragaria x a... [more]
XP_021617082.11.300e-10357.46sorbitol dehydrogenase [Manihot esculenta] >OAY482... [more]
XP_012090335.11.700e-10357.18sorbitol dehydrogenase [Jatropha curcas] >KDP22337... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL008nonsL008Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR060ncniR060Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR043ngnoR043Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003993NSK003993Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO18G01370.1NO18G01370.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|607989gene_9066Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100057g10gene7104Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO18G01370.1NO18G01370.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO18G01370 ID=NO18G01370|Name=NO18G01370|organism=Nannochloropsis oceanica|type=gene|length=1095bp
ATGTCGCCCGACAGTCCACCACCACCGCCGCTCAACAATCCGGCCATCTT
TCTCAATGGCATCGACTGCATGACCATCGGACATTACGCCCTCCCGCCCC
TGGGGGCTCAAGACGTGCGCATCGCAGTTAAAGCCGTGGGTATATGTGCC
TCGGACGTACATTACTTGCGCAAAGGCCGCATTGCTGACTTCATCGTCAA
AGAACCCATGGTGATAGGCCACGAGAGCGCGGGAGAGGTGGTAGCCGTGG
GGGAGGCCATCACAGCTCTCGCCGTAGGAGATCGCGTGGCAATGGAACCA
GGCATATCCTGCCAGCGATGCAAGCCATGTAAAACCGGAGCTTATAATTT
ATGTCCGGACATGAAGTTCTTTGCGACCCCTCCCGTGCATGGTTCCCTCG
CGCACTTTGTCCACCACCCTGCGGACCTTTGCTTCCCCTTGCCCAGCCCC
TTATCCTATGAAGATGGTGCCATGTGTGAGCCACTTGCCGTGGGTGTGTA
TGCCTGCATCAAGGCCAATATTCGACCAGGGATGCGTGTACTCATCACAG
GGGCGGGACCCATTGGCTTGGTCACTCTTTTGAGCGCCCGTGCATTTGGG
GCCTCAGAGATAATAATTACAGATGTGGATGAACGACGACTTGCTATTGC
TGCTGCTACCGCACCAGGGGTGAAAGCCGTGTGCGTGGCAGGGAAGATCA
CAGCTGAAGTGCTAGTAATGATCGGAGGGCCAGCCTCTGTGGATGTCACG
ATGGACTGCGCAGGTTTTGAGACCACTGTGGAGGTCGCATTGGAGGCAAC
GACCAACGGAGGAAAAGTATTATTGATTGGGATGGGCTGTAGCACCCGCA
CTATGCATGTGCCGTTGCTATCTGCCGCTGTTAGAGAAGTGGACTTACTT
GGGAGTTTCAGGTATCGCAATGTATATCCTACGTGTTTGTCTCTCATAGA
ATCGGGGAGGATAGATGTGAGGAAACTGATTACGCACCGTGTGGACCTTT
CAGGGGAGGGGCGTTTCACGGCGGAGCTGGTGAAAGAGGGCTTTGCGTTG
TCGGAAAAAGGGGGAGATGTGGTGAAAGTGATGTTCAATCTGTAA
back to top

protein sequence of NO18G01370.1

>NO18G01370.1-protein ID=NO18G01370.1-protein|Name=NO18G01370.1|organism=Nannochloropsis oceanica|type=polypeptide|length=365bp
MSPDSPPPPPLNNPAIFLNGIDCMTIGHYALPPLGAQDVRIAVKAVGICA
SDVHYLRKGRIADFIVKEPMVIGHESAGEVVAVGEAITALAVGDRVAMEP
GISCQRCKPCKTGAYNLCPDMKFFATPPVHGSLAHFVHHPADLCFPLPSP
LSYEDGAMCEPLAVGVYACIKANIRPGMRVLITGAGPIGLVTLLSARAFG
ASEIIITDVDERRLAIAAATAPGVKAVCVAGKITAEVLVMIGGPASVDVT
MDCAGFETTVEVALEATTNGGKVLLIGMGCSTRTMHVPLLSAAVREVDLL
GSFRYRNVYPTCLSLIESGRIDVRKLITHRVDLSGEGRFTAELVKEGFAL
SEKGGDVVKVMFNL*
back to top
Synonyms
Publications