NO18G01200, NO18G01200 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO18G01200 vs. NCBI_GenBank
Match: PRW60200.1 (MBL fold metallo-hydrolase [Chlorella sorokiniana]) HSP 1 Score: 142.5 bits (358), Expect = 2.900e-30 Identity = 81/239 (33.89%), Postives = 114/239 (47.70%), Query Frame = 0 Query: 36 VPVKLHFLLPIFWVLSLLSGLAYGGTYIGFRFIIDVLILFVTVFAHELGHSYAAIQYSGKCHCITLWPLGGFAEVTHEQGPKEDLWVSFAGPLTHVPMCAIWYGIVAAVVRGPFNIMTIPCDLFNSQPCFWTNVCVSAGFLNICLFLFNLLIPAYPLDASRILVDFFALCKVEVNKAALITAGISMPIGLGLLCYGFWGFSRGAANYTMTLFLAIFILYSTWGVFKAARSGNAARHPMF 275 +P++L + LP+ +V++LL+ HELGH+ AA + G I LWPLGG A V H+ GPK DLW++ AGPLTH+P +W+ I+ V + I + F V A LNI L LFNL +PA+PLD RIL D L V AA ITA ++ +G G++ G W LY T +++ R+G +HP+F Sbjct: 15 IPIRLSYTLPLLFVVALLAEAFTSXXXXXXXXXXXXXXXXXXXXXHELGHALAARRVGGHADGILLWPLGGLAYVGHDCGPKADLWIALAGPLTHIPQFLVWFAILFPVYHAAYGSWDISLAIPYPDAHFGLAVVAGACQLNIGLVLFNLFLPAFPLDGGRILADLLLLRGVSPETAAKITASLATVLGAGVVAIGIWRTLXXXXXXXXXXXXXXXXLYVTVQLWECIRAGTVRQHPLF 253
BLAST of NO18G01200 vs. NCBI_GenBank
Match: XP_003058920.1 (predicted protein [Micromonas pusilla CCMP1545] >EEH57375.1 predicted protein [Micromonas pusilla CCMP1545]) HSP 1 Score: 141.0 bits (354), Expect = 8.400e-30 Identity = 92/244 (37.70%), Postives = 125/244 (51.23%), Query Frame = 0 Query: 36 VPVKLHFLLPIFWVLSLLSG-LAYGGTYIG-FRFIIDVLILFVTVFAHELGHSYAAIQYSGKCHCITLWPLGGFAEVTHEQGPKEDLWVSFAGPLTHVPMCAIWYGIVAAVVRGPFNIMTIPCDLFNSQPCFWTNVCVSAGFLNICLFLFNLLIPAYPLDASRILVDFFALCKVEVNKAALITAGISMPIGLGLLCYGFWGFSRGAANYTMTLFLAIFILYSTWGVFKAARSGNAARHPMFVHY 278 VP+ +H L P+F V++ + G + T G F++ ILF TV HE GH +A G H I LWPLGG A V H +DL VS AGPLTH+P C W I A+ G N +T D F T++C +A +NI L LFNL +PA+PLD RI D LC V +AA I G S G+ ++ GF+ +T+F+ ++L + K +SG HP+F Y Sbjct: 40 VPICIHNLFPLFIVVTTIIGFIPPASTESGLLNFVVLGPILFTTVLIHEGGHCWATKLVGGDVHKILLWPLGGLAYVGHSGDAADDLKVSIAGPLTHIPQCLFWV-IALAMGAGSVN-LTYTGD-------FATDMCRAAVIMNIQLALFNLFVPAFPLDGGRIFADSMLLCGVPAVRAAGIMVGTSTVFGIAIVALGFY------FGQFITIFVGGWVLTQAVDLGKLVKSGMVHEHPLFAKY 268
BLAST of NO18G01200 vs. NCBI_GenBank
Match: XP_003080782.1 (Peptidase M50 [Ostreococcus tauri] >CAL54950.1 Peptidase M50 [Ostreococcus tauri]) HSP 1 Score: 138.3 bits (347), Expect = 5.400e-29 Identity = 83/239 (34.73%), Postives = 126/239 (52.72%), Query Frame = 0 Query: 44 LPIFWVLSLLSGLAYGGTYIGFRFIIDVLILFVTVFAHELGHSYAAIQYSGKCHCITLWPLGGFAEVTHE-QGPKEDLWVSFAGPLTHVPMCAIWYGIVAAVVRGPFNIMTIPCDLFNSQPCFWTNVCVSAGFLNICLFLFNLLIPAYPLDASRILVDFFALCKVEVNKAALITAGISMPIGLGLLCYGFWGFSRGAANYTMTLFLAIFILYSTWGVFKAARSGNAARHPMFVHYYRTS 282 L I +V +++ ++ G Y + ++LF TV HELGH +A G I LWPLGG A + + K DLWV+ AGPLTH+PM +W +++A+ G F ++ A ++N+ LF FNLLIPAYP+DASRIL A+C V V+ A+++ G+SM + LL YGFW + +F+ + + T+ ++ R+G +HP F Y + S Sbjct: 78 LLIIYVAFVIAMGSFDGLYHFGLSLFYCVVLFGTVLVHELGHCWATRNVGGVVSHILLWPLGGLAYINLDASSAKGDLWVAAAGPLTHIPMGLVWL-LLSAITSG-----------------FVKDLAWEALWINVYLFAFNLLIPAYPMDASRILTSTLAICGVSVSAASIVVIGLSMIMSTALLVYGFW------LVQLLPVFVGGYTMAETYKIYALRRAGQIHQHPSFAKYEQRS 292
BLAST of NO18G01200 vs. NCBI_GenBank
Match: OUS46967.1 (sporulation protein IVFB related prote [Ostreococcus tauri]) HSP 1 Score: 138.3 bits (347), Expect = 5.400e-29 Identity = 83/239 (34.73%), Postives = 126/239 (52.72%), Query Frame = 0 Query: 44 LPIFWVLSLLSGLAYGGTYIGFRFIIDVLILFVTVFAHELGHSYAAIQYSGKCHCITLWPLGGFAEVTHE-QGPKEDLWVSFAGPLTHVPMCAIWYGIVAAVVRGPFNIMTIPCDLFNSQPCFWTNVCVSAGFLNICLFLFNLLIPAYPLDASRILVDFFALCKVEVNKAALITAGISMPIGLGLLCYGFWGFSRGAANYTMTLFLAIFILYSTWGVFKAARSGNAARHPMFVHYYRTS 282 L I +V +++ ++ G Y + ++LF TV HELGH +A G I LWPLGG A + + K DLWV+ AGPLTH+PM +W +++A+ G F ++ A ++N+ LF FNLLIPAYP+DASRIL A+C V V+ A+++ G+SM + LL YGFW + +F+ + + T+ ++ R+G +HP F Y + S Sbjct: 78 LLIIYVAFVIAMGSFDGLYHFGLSLFYCVVLFGTVLVHELGHCWATRNVGGVVSHILLWPLGGLAYINLDASSAKGDLWVAAAGPLTHIPMGLVWL-LLSAITSG-----------------FVKDLAWEALWINVYLFAFNLLIPAYPMDASRILTSTLAICGVSVSAASIVVIGLSMIMSTALLVYGFW------LVQLLPVFVGGYTMAETYKIYALRRAGQIHQHPSFAKYEQRS 292
BLAST of NO18G01200 vs. NCBI_GenBank
Match: XP_001419355.1 (predicted protein [Ostreococcus lucimarinus CCE9901] >ABO97648.1 predicted protein [Ostreococcus lucimarinus CCE9901]) HSP 1 Score: 131.0 bits (328), Expect = 8.700e-27 Identity = 81/207 (39.13%), Postives = 105/207 (50.72%), Query Frame = 0 Query: 72 LILFVTVFAHELGHSYAAIQYSGKCHCITLWPLGGFAEVTHE-QGPKEDLWVSFAGPLTHVPMCAIWYGIVAAVVRGPFNIMTIPCDLFNSQPCFWTNVCVSAGFLNICLFLFNLLIPAYPLDASRILVDFFALCKVEVNKAALITAGISMPIGLGLLCYGFWGFSRGAANYTMTLFLAIFILYSTWGVFKAARSGNAARHPMFVHY 278 ++LF TV HELGH AA G+ I LWPLGG A V + K D +VSFAGPLTH PM A W A+ G +I P D F + +LNI LFLFN+ IPAYPLD R+L+ A+C V + A +S + LG++ YGFW M +F+ F L T+ ++ +SG HP F Y Sbjct: 104 VLLFFTVLVHELGHCAAARAVGGQVSHILLWPLGGLAYVNVDATDAKGDFFVSFAGPLTHAPMLAGWVASF-ALATGSTDISEWPRDNFVGA------LAYEGCWLNIFLFLFNVCIPAYPLDGCRMLMALLAMCSVSLTTTATTIICLSTVMSLGVIAYGFW------LVRVMPVFVGAFTLAETYKLYTLLKSGALEEHPSFAKY 297
BLAST of NO18G01200 vs. NCBI_GenBank
Match: OLQ11488.1 (CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [Symbiodinium microadriaticum]) HSP 1 Score: 129.4 bits (324), Expect = 2.500e-26 Identity = 84/245 (34.29%), Postives = 131/245 (53.47%), Query Frame = 0 Query: 36 VPVKLHFLLPIFWVLSLLSGLAYGGTYIGFRFIIDVL--ILFVTVFAHELGHSYAAIQYSGKCHC----ITLWPLGGFAEVTHEQGPKEDLWVSFAGPLTHVPMCAIWYGIVAAVVRGPFNIMTIPCDLFNSQPCFWTNVCVSAGFLNICLFLFNLLIPAYPLDASRILVDFFALCKVEVNKAALITAGISMPIGLGLLCYGFWGFSRGAANYTMTLFLAIFILYSTWGVFKAARSGNAARHPMF 275 +P++LH LLP+ VL+ LS L G ++ + V +L +TV HELGH AA KC C I LWPLGG A + GPK +++S AGP TH+PM W ++ AV+ G +T+ + F++ +C++ N+ + LFNLL+P +PLD SRIL L +E KAA + S+ + L+ W ++ +A ++ L LA ++ TW + ++ G+ A P+F Sbjct: 118 IPLRLHVLLPLTVVLAGLSPLVSGHPWLSVVLAVLVAGPLLLITVLIHELGHVLAA----RKCGCTADHILLWPLGGLAFIGGAVGPKAQIFISAAGPATHLPMLGAW-ALLLAVLHGR---VTLSLSGLFYERDFFSLLCIAMLNTNVAMLLFNLLVPCFPLDCSRILASVL-LFWMEPGKAAGVVVVCSVIALVVLVGLSVWSYAERSAALSLNLVLAFWLAMQTWRLHRSRLQGDLASDPLF 353
BLAST of NO18G01200 vs. NCBI_GenBank
Match: KXZ54394.1 (hypothetical protein GPECTOR_5g50 [Gonium pectorale]) HSP 1 Score: 124.8 bits (312), Expect = 6.200e-25 Identity = 78/239 (32.64%), Postives = 108/239 (45.19%), Query Frame = 0 Query: 36 VPVKLHFLLPIFWVLSLLSGLAYGGTYIGFRFIIDVLILFVTVFAHELGHSYAAIQYSGKCHCITLWPLGGFAEVTHEQGPKEDLWVSFAGPLTHVPMCAIWYGIVAAVVRGPFNIMTIPCDLFNSQPCFWTNVCVSAGFLNICLFLFNLLIPAYPLDASRILVDFFALCKVEVNKAALITAGISMPIGLGLLCYGFWGFSRGAANYTMTLFLAIFILYSTWGVFKAARSGNAARHPMF 275 +P++LH + L LL L YGG ++ F++ +L +TV HELGH AA G I LWPLGG A + H GPK +C + G LNI LF FNLL+PAYPLD R+LVD V AA IT ++ +G G+ YG F +T+ +A+FIL++TW +F+A R+ +HP+F Sbjct: 17 IPIRLHVTFFVVLALQLLGSLHYGGDWVLLWFLLLGPVLLLTVLVHELGHCLAARSVGGTAESILLWPLGGLAFIGHTAGPK--------------------------------------------------GICGAWGTLNISLFAFNLLVPAYPLDGGRLLVDGMLAAGVRPRLAASITVALAAALGCGVAVYGIVVFQ------MVTIMVAVFILFATWQLFQALRTDALGQHPLF 199
BLAST of NO18G01200 vs. NCBI_GenBank
Match: OLQ05902.1 (Zinc metalloprotease [Symbiodinium microadriaticum]) HSP 1 Score: 97.1 bits (240), Expect = 1.400e-16 Identity = 65/197 (32.99%), Postives = 85/197 (43.15%), Query Frame = 0 Query: 36 VPVKLHFLLPIFWVLSLLSGLAYG-----------GTYIGFRFIIDVLILFVTVFAHELGHSYAAIQYSGKCHCITLWPLGGFAEVTHEQGPKEDLWVSFAGPLTHVPMCAIWYGIVAAVVRGPFNIMTIPCDLFNSQPCFWTNVCVSAGFLNICLFLFNLLIPAYPLDASRILVDFFALCKVEVNKAALITAGISM 222 +P+ +H L F+V L A T I I +ILF+TV HELGH A G+ I LWPLGG A + G K DL V+ AGPLTH P W + V + S +C A L I L +FNLL+P YPLD S++++ LC AA +S+ Sbjct: 21 IPIYVHVFLVGFFVWRLSDEEAAAKRSQGLPNYRKATEIALTCSISFVILFLTVLIHELGHCAGAKLVGGRVSRILLWPLGGLAFCSSGGGAKGDLLVALAGPLTHAPQYLAWLSLYRLAVHSQ--------EELGSWAPTVRGLCHGAMHLQIILVVFNLLVPVYPLDCSQVIISLCRLCGASQRSAAYFMVALSL 209
BLAST of NO18G01200 vs. NCBI_GenBank
Match: WP_029354816.1 (CBS domain-containing protein [Bosea sp. 117]) HSP 1 Score: 90.1 bits (222), Expect = 1.700e-14 Identity = 70/248 (28.23%), Postives = 117/248 (47.18%), Query Frame = 0 Query: 24 WQMGTIHLKGQVVPVKLHFLLPIFWVLSLLSGLAYGGTYIGFRFIIDVLILFVTVFAHELGHSYAAIQYSGKCHCITLWPLGGFAEVTH-EQGPKEDLWVSFAGPLTHVPMCAIWYGIVAAVVRGPFNIMTIPCDLFNSQPCFWTNVCVSAGFLNICLFLFNLLIPAYPLDASRILVDFFALCKVEVNKAALITAGISMPIGLGLLCYGFWGFSRGAANYTMTLFLAIFILYSTWGVFKAARSGNAAR 271 W + ++ G V + + FLL + W+ + + GG + + V +LF+ V HE GH +AA +Y K +TLWP GG A + + P E+L V+ AGP +V + ++ A++ G + + D+ N Q + NI L +FN LIPA+P+D R+L A+ ++ +A A I + +GL G +G M + +A+F+ + G A+ AAR Sbjct: 3 WSLTVGYVYGTAVRIHVTFLLFLIWIWA--AYYQQGGAGAAWEGVAFVALLFLCVLLHEFGHIFAARRYGVKTPEVTLWPFGGIASLERIPEKPSEELVVAIAGPAVNVVIAL----VLIAILGGTTGVEHLQ-DIENPQ----VGLLAKLAGANIFLVVFN-LIPAFPMDGGRVLRALLAM-RMGHAQATQTAASIGQALAIGLGFLGIFG-------NPMLIIIAVFVFLAAGGEAGHAQMTQAAR 230
BLAST of NO18G01200 vs. NCBI_GenBank
Match: WP_021096836.1 (CBS domain-containing protein [Rubellimicrobium thermophilum] >EPX87332.1 Zn-dependent protease [Rubellimicrobium thermophilum DSM 16684]) HSP 1 Score: 89.0 bits (219), Expect = 3.800e-14 Identity = 72/249 (28.92%), Postives = 120/249 (48.19%), Query Frame = 0 Query: 23 AWQMGTIHLKGQVVPVKLHFLLPIFWVLSLLSGLAYGGTYIGFRFIIDVLILFVTVFAHELGHSYAAIQYSGKCHCITLWPLGGFAEVTH-EQGPKEDLWVSFAGPLTHVPMCAIWYGIVAAVVRGPFNIMTIPCDLFNSQPCFWTNVCVSAGFLNICLFLFNLLIPAYPLDASRILVDFFALCKVEVNKAALITAGISMPIGLGLLCYGFWGFSRGAANYTMTLFLAIFILYSTWGVFKAARSGNAAR 271 +W L G + + + FLL + W+ ++ GG ++ +L +F V AHE GH+ AA +Y + ITL P+GG A + + P E++ V+ AGP +V + A+ + I+ A F+ T+ N+ ++ LN+ L LFN LIPA+P+D R+L A+ ++E +A I A + + GL GF G M +F+AIF+ + +A+ + AR Sbjct: 2 SWSYPVARLLGSEIRIHVTFLLFLVWI--GVARYIQGGAAAAAESLLLILAIFACVLAHEFGHALAARRYGIRTPDITLLPIGGIARLERMPERPAEEIIVALAGPAVNVVIAAVLFLILGA----RFDPATL-----NALDNPGASLLAQIAALNLFLVLFN-LIPAFPMDGGRVLRALLAM-RMEPARATAIAARVGQALAFGL---GFLGL----LGNPMLIFIAIFVYIAATAEAQASSLDDIAR 230 The following BLAST results are available for this feature:
BLAST of NO18G01200 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO18G01200 ID=NO18G01200|Name=NO18G01200|organism=Nannochloropsis oceanica|type=gene|length=2925bpback to top protein sequence of NO18G01200.1 >NO18G01200.1-protein ID=NO18G01200.1-protein|Name=NO18G01200.1|organism=Nannochloropsis oceanica|type=polypeptide|length=409bpback to top Synonyms
Publications
|