NO18G01200, NO18G01200 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO18G01200 vs. NCBI_GenBank
Match: EWM23303.1 (stage iv sporulation protein fb [Nannochloropsis gaditana]) HSP 1 Score: 545.4 bits (1404), Expect = 1.500e-151 Identity = 298/366 (81.42%), Postives = 315/366 (86.07%), Query Frame = 0 Query: 1 MNR-TGTGNNPAGVADNPFPKQWAWQMGTIHLKGQVVPVKLHFLLPIFWVLSLLSGLAYGGTYIGFRFIIDVLILFVTVFAHELGHSYAAIQYSGKCHCITLWPLGGFAEVTHEQGPKEDLWVSFAGPLTHVPMCAIWYGIVAAVVRGPFNIMTIPCDLFNSQPCFWTNVCVSAGFLNICLFLFNLLIPAYPLDASRILVDFFALCKVEVNKAALITAGISMPIGLGLLCYGFWGFSRGAANYTMTLFLAIFILYSTWGVFKAARSGNAARHPMFVHYYRTSVPVDXXXXXXXXXXXXXXXXXXXXXGGRIMSLWGGGSATAGADGDXXXXXXXXXXXXXXTAFSKMEAGKGHRLGGKAAPTGVPA 366 MNR TGTGNNPAGVADNPFP QWAWQ+G I L+GQ VPVKLHFLLPIFWVLSLLSGLAYGGTYIGFRFI+DVLILF+TVF HE+GHS AAIQYSGKCHCITLWPLGGFAEVTHE+GPKEDLWVSFAGPLTH+PMCAIWYGIVAAVV+ PFNIM IPCDL +SQ CFWTNV VSAGFLN+CLFLFNL IPAYPLDASRILVDFFALC VEVN+AALITA IS PIGL LL YGFW F+RGAANYTMT+FLAIFILYSTWGV KAARSG AARHPMF+HYYRTS P XXXXXXXXXXXXGG+I SLWG +G XXXXXXXXXXXXXX SKMEAGKGHRLGGK + PA Sbjct: 1 MNRNTGTGNNPAGVADNPFPNQWAWQIGAITLRGQRVPVKLHFLLPIFWVLSLLSGLAYGGTYIGFRFIVDVLILFMTVFIHEMGHSLAAIQYSGKCHCITLWPLGGFAEVTHEKGPKEDLWVSFAGPLTHIPMCAIWYGIVAAVVKRPFNIMAIPCDLLHSQACFWTNVAVSAGFLNMCLFLFNLFIPAYPLDASRILVDFFALCNVEVNRAALITACISFPIGLALLGYGFWAFARGAANYTMTIFLAIFILYSTWGVIKAARSGTAARHPMFIHYYRTSEP----PVSATAAXXXXXXXXXXXXGGQITSLWG-----SGXXXXXXXXXXXXXXXXXXXVLSKMEAGKGHRLGGKPVTSSTPA 357
BLAST of NO18G01200 vs. NCBI_GenBank
Match: XP_005855970.1 (stage iv sporulation protein fb, partial [Nannochloropsis gaditana CCMP526] >EKU20379.1 stage iv sporulation protein fb, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 540.8 bits (1392), Expect = 3.600e-150 Identity = 296/366 (80.87%), Postives = 313/366 (85.52%), Query Frame = 0 Query: 1 MNR-TGTGNNPAGVADNPFPKQWAWQMGTIHLKGQVVPVKLHFLLPIFWVLSLLSGLAYGGTYIGFRFIIDVLILFVTVFAHELGHSYAAIQYSGKCHCITLWPLGGFAEVTHEQGPKEDLWVSFAGPLTHVPMCAIWYGIVAAVVRGPFNIMTIPCDLFNSQPCFWTNVCVSAGFLNICLFLFNLLIPAYPLDASRILVDFFALCKVEVNKAALITAGISMPIGLGLLCYGFWGFSRGAANYTMTLFLAIFILYSTWGVFKAARSGNAARHPMFVHYYRTSVPVDXXXXXXXXXXXXXXXXXXXXXGGRIMSLWGGGSATAGADGDXXXXXXXXXXXXXXTAFSKMEAGKGHRLGGKAAPTGVPA 366 MNR TGTGNNPAGVADNPFP QWAWQ+G I L+GQ VPVKLHFLLPIFWVLSLLSGLAYGG YIGFRFI+DVLILF+TVF HE+GHS AAIQYSGKCHCITLWPLGGFAEVTHE+GPKEDLWVSFAGPLTH+PMCAIWYGIVAAVV+ PFNIM IPCDL +SQ CFWTNV VSAGFLN+CLFLFNL IPAYPLDASRILVDFFALC VEVN+AALITA IS PIGL LL YG W F+RGAANYTMT+FLAIFILYSTWGV KAARSG AARHPMF+HYYRTS P XXXXXXXXXXXXGG+I SLWG +G XXXXXXXXXXXXXX SKMEAGKGHRLGGK + PA Sbjct: 34 MNRNTGTGNNPAGVADNPFPNQWAWQIGAITLRGQRVPVKLHFLLPIFWVLSLLSGLAYGGKYIGFRFIVDVLILFMTVFIHEMGHSLAAIQYSGKCHCITLWPLGGFAEVTHEKGPKEDLWVSFAGPLTHIPMCAIWYGIVAAVVKRPFNIMAIPCDLLHSQACFWTNVAVSAGFLNMCLFLFNLFIPAYPLDASRILVDFFALCNVEVNRAALITACISFPIGLALLGYGLWAFARGAANYTMTIFLAIFILYSTWGVIKAARSGTAARHPMFIHYYRTSEP----PVSATAAXXXXXXXXXXXXGGQITSLWG-----SGXXXXXXXXXXXXXXXXXXXVLSKMEAGKGHRLGGKPVTSSTPA 390
BLAST of NO18G01200 vs. NCBI_GenBank
Match: PNH00507.1 (hypothetical protein TSOC_013667 [Tetrabaena socialis]) HSP 1 Score: 177.9 bits (450), Expect = 6.200e-41 Identity = 97/240 (40.42%), Postives = 136/240 (56.67%), Query Frame = 0 Query: 36 VPVKLHFLLPIFWVLSLLSGLAYGGTYIGFRFIIDVLILFVTVFAHELGHSYAAIQYSGKCHCITLWPLGGFAEVTHEQGPKEDLWVSFAGPLTHVPMCAIWYGIVAAVVRGPFNIMTIPCDL-FNSQPCFWTNVCVSAGFLNICLFLFNLLIPAYPLDASRILVDFFALCKVEVNKAALITAGISMPIGLGLLCYGFWGFSRGAANYTMTLFLAIFILYSTWGVFKAARSGNAARHPMF 275 +P++LH + + L LL L YG + I+ +L +TV HELGH AA G+ + LWPLGG A + H GPK D+WV+ AGPLTHVPM IW ++ I D+ + S W VCV A +N+ L FNLL+PAYPLD R+LVD V AA IT G+++P+GL +L YG F +T+ +A+FIL++T+ +F+A R+ + ARHP+F Sbjct: 21 IPIRLHLIFLVVLALQLLGSLQYGLPQVLLWSILLGPVLLLTVLVHELGHCLAARSVGGQVDGVLLWPLGGLAFIGHTAGPKADMWVAVAGPLTHVPMVGIWLLLLLPAFHASTGSWAINLDMPWPSSGHLWHAVCVGAIIINLSLLAFNLLVPAYPLDGGRLLVDALLAAGVAPRLAAGITVGVAVPLGLLVLVYGILVFQ------MVTIMVAVFILFATFQLFQALRTDSLARHPLF 254
BLAST of NO18G01200 vs. NCBI_GenBank
Match: XP_005649223.1 (hypothetical protein COCSUDRAFT_65471 [Coccomyxa subellipsoidea C-169] >EIE24679.1 hypothetical protein COCSUDRAFT_65471 [Coccomyxa subellipsoidea C-169]) HSP 1 Score: 158.3 bits (399), Expect = 5.100e-35 Identity = 88/241 (36.51%), Postives = 131/241 (54.36%), Query Frame = 0 Query: 36 VPVKLHFLLPIFWVLSLLSGLAYGGTYIGFRFIIDVLILFVTVFAHELGHSYAAIQYSGKCHCITLWPLGGFAEVTHEQGPKEDLWVSFAGPLTHVPMCAIWYGIVAAVVRGPFNIMTIPCDLFNSQPCFWTNVCVSAGFLNICLFLFNLLIPAYPLDASRILVDFFALCKVEVNKAALITAGISMPIGLGLLCYGFWGFSRGAANYTMTLFLAIFILYSTWGVFKAARSGNAARHPMFVH 277 +PV+LHFL + L++LS + + ++ IL +TV+ HELGH A+ + + H I LWPLGG A V H PK DL+VS +GPLTHVP IW+ I+A + T + + + FW +C A LN+ + FNLL+PAYPLD RI D LC V A+IT +++ I L+ WG A +T+ + I++LY++ + A ++G +HPMF + Sbjct: 19 IPVRLHFLFVVALFLAVLSQAFVSAQSVAWAVVLFGPILLLTVYIHELGHCLASRKVGAEVHGILLWPLGGLAFVGHSTSPKTDLFVSISGPLTHVPQFFIWFAILAVSSHVVHHGWTPSLSVPDPRQHFWLALCAGASQLNLYIMAFNLLLPAYPLDGGRIFADLLLLCGVNARTTAIITVVLAVAIAGALIA---WGIVEVA---ILTIAVGIWMLYTSAELGLAIKNGTVTQHPMFCY 253
BLAST of NO18G01200 vs. NCBI_GenBank
Match: XP_001699886.1 (intramembrane metalloprotease [Chlamydomonas reinhardtii]) HSP 1 Score: 150.2 bits (378), Expect = 1.400e-32 Identity = 87/246 (35.37%), Postives = 131/246 (53.25%), Query Frame = 0 Query: 36 VPVKLHFLLPIFWVLSLLSGLAYGGTYIGFRFIIDVLILFVTVFAHELGHSYAAIQYSGKCHCITLWPLGGFAEVTHEQGPKEDLWVSFAGPLTHVPMCAIWYGIVAAVVRGPFNIMTIPCDLFNSQPCFWTNVCVSAG-FLNICLFLFNLLIPAYPLDASRILVDFFALCKVEVNKAALITAGISMPIGLGLLCYGFWGFSRGAANYTMTLFLAIFILYSTWGVFKAARSGNAARHPMFVHYYRT 281 +P++LH I L LL+ + GG + I+ +L TV HELGH AA Q I LWPLGG A + PK D WV+ AGPLTH+P +W ++ V + + + + + + G +NI LF FNLL+PAYPLD R+LVD V + A IT +++P+GLG++ YGF+ + +T+ +A FIL++T+ +++A R+ ARHP+F Y + Sbjct: 28 IPIELHASFFIVLGLQLLTSIPQGGWVVLLWSIVLGPMLLGTVLLHELGHCLAARQVGAHVSGILLWPLGGLAFIGQTPSPKADAWVALAGPLTHIPQVLVWLLLLLPVYHADTGSWAVKLYVPYPEAAHFLHSLFACGVIINISLFAFNLLVPAYPLDGGRLLVDGLLWAGVLPRRTAWITICVAVPLGLGVMVYGFYPHFQ-----MVTIMVAGFILFATYQLYQAVRADALARHPLFSAVYNS 268
BLAST of NO18G01200 vs. NCBI_GenBank
Match: PNW87249.1 (hypothetical protein CHLRE_02g115050v5 [Chlamydomonas reinhardtii]) HSP 1 Score: 150.2 bits (378), Expect = 1.400e-32 Identity = 87/246 (35.37%), Postives = 131/246 (53.25%), Query Frame = 0 Query: 36 VPVKLHFLLPIFWVLSLLSGLAYGGTYIGFRFIIDVLILFVTVFAHELGHSYAAIQYSGKCHCITLWPLGGFAEVTHEQGPKEDLWVSFAGPLTHVPMCAIWYGIVAAVVRGPFNIMTIPCDLFNSQPCFWTNVCVSAG-FLNICLFLFNLLIPAYPLDASRILVDFFALCKVEVNKAALITAGISMPIGLGLLCYGFWGFSRGAANYTMTLFLAIFILYSTWGVFKAARSGNAARHPMFVHYYRT 281 +P++LH I L LL+ + GG + I+ +L TV HELGH AA Q I LWPLGG A + PK D WV+ AGPLTH+P +W ++ V + + + + + + G +NI LF FNLL+PAYPLD R+LVD V + A IT +++P+GLG++ YGF+ + +T+ +A FIL++T+ +++A R+ ARHP+F Y + Sbjct: 35 IPIELHASFFIVLGLQLLTSIPQGGWVVLLWSIVLGPMLLGTVLLHELGHCLAARQVGAHVSGILLWPLGGLAFIGQTPSPKADAWVALAGPLTHIPQVLVWLLLLLPVYHADTGSWAVKLYVPYPEAAHFLHSLFACGVIINISLFAFNLLVPAYPLDGGRLLVDGLLWAGVLPRRTAWITICVAVPLGLGVMVYGFYPHFQ-----MVTIMVAGFILFATYQLYQAVRADALARHPLFSAVYNS 275
BLAST of NO18G01200 vs. NCBI_GenBank
Match: PSC73964.1 (peptidase M50 [Micractinium conductrix]) HSP 1 Score: 149.8 bits (377), Expect = 1.800e-32 Identity = 88/241 (36.51%), Postives = 119/241 (49.38%), Query Frame = 0 Query: 36 VPVKLHFLLPIFWVLSLLS--GLAYGGTYIGFRFIIDVLILFVTVFAHELGHSYAAIQYSGKCHCITLWPLGGFAEVTHEQGPKEDLWVSFAGPLTHVPMCAIWYGIVAAVVRGPFNIMTIPCDLFNSQPCFWTNVCVSAGFLNICLFLFNLLIPAYPLDASRILVDFFALCKVEVNKAALITAGISMPIGLGLLCYGFWGFSRGAANYTMTLFLAIFILYSTWGVFKAARSGNAARHPMF 275 VPV++H PIF+ L L++ HELGHS AA + G I LWPLGG A + H GPK DL ++ AGP TH+P +W+ I+ + T + N F V A LNI L FNLL+PAYPLD R+ D L V +AA TAG+++ G ++ G W S MT+ + +++LYSTWG+ +A R G A+HPMF Sbjct: 18 VPVRMHMTFPIFFALGLVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXHELGHSLAARRLGGHAEGILLWPLGGLAYLAHSSGPKADLLIALAGPATHIPQFLVWFAILFPLHHAATGSWTPSLTIPNPSWSFGLAVVAGACQLNIALAAFNLLLPAYPLDGGRVFADTLLLAGVAPERAAKATAGVAVVGGCAVVGLGIWQSS------YMTIAVGLWMLYSTWGLVEAIRRGAVAQHPMF 252
BLAST of NO18G01200 vs. NCBI_GenBank
Match: GAQ83013.1 (peptidase m50 domain protein [Klebsormidium nitens]) HSP 1 Score: 149.1 bits (375), Expect = 3.100e-32 Identity = 87/240 (36.25%), Postives = 132/240 (55.00%), Query Frame = 0 Query: 36 VPVKLHFLLPIFWVLSLLSGLAYGGTYIGFRFIIDVLILFVTVFAHELGHSYAAIQY-SGKCHCITLWPLGGFAEVTHEQGPKEDLWVSFAGPLTHVPMCAIWYGIVAAVVRGPFNIMTIPCDLFNSQPCFWTNVCVSAGFLNICLFLFNLLIPAYPLDASRILVDFFALCKVEVNKAALITAGISMPIGLGLLCYGFWGFSRGAANYTMTLFLAIFILYSTWGVFKAARSGNAARHPMF 275 +PV++ + PI VL++L GL+ G I + + +LF TV HE GHS A ++ +G I LWPLGG A H P +D V+ GPLTH+P AIW I+ A+ R + + + + FWTN+ +A +NI LF FNLL+PAYPLD RIL D C V AA++T I+ PI + ++ YG + + MT+ + +++L+ + + R+G +HP+F Sbjct: 36 IPVRVSYFFPIVIVLAVLDGLSEGWMSILWYVTLFGPLLFGTVLVHEFGHSLACLKLANGHVDQILLWPLGGLAYCGHGGSPIDDFKVAICGPLTHIPQTAIWLAIL-AISRPDDVSLNVYAPVGDH---FWTNLVAAAIMVNIALFCFNLLLPAYPLDGGRILADLLLSCGVSSKVAAIVTLCIATPIAVLIVMYGIYNVA------IMTIAVGVWVLFQNFSLAVLVRNGQVDQHPLF 265
BLAST of NO18G01200 vs. NCBI_GenBank
Match: XP_002508232.1 (predicted protein [Micromonas commoda] >ACO69490.1 predicted protein [Micromonas commoda]) HSP 1 Score: 148.3 bits (373), Expect = 5.200e-32 Identity = 92/249 (36.95%), Postives = 128/249 (51.41%), Query Frame = 0 Query: 36 VPVKLHFL----LPIFWVLSLLSGLAYGGTYIGFR-FIIDVLILFVTVFAHELGHSYAAIQYSGKCHCITLWPLGGFAEVTHEQGPKEDLWVSFAGPLTHVPMCAIWYGIVAAVVRGPFNIMTIPCDLFNSQPCFWTNVCVSAGFLNICLFLFNLLIPAYPLDASRILVDFFALCKVEVNKAALITAGISMPIGLGLLCYGFWGFSRGAANYT--MTLFLAIFILYSTWGVFKAARSGNAARHPMFVHY 278 +P+++H L + I VL + G G + GF F+++ ILF TV HELGH +A + G I LWPLGG A + H KEDL+VS AGPLTH+P +W ++AA G + F+ ++C A +N+ LFLFNL PAYPLD RILV LC V V A IT +S GL ++C G A Y +T+F+ ++ W +++ R G HP+F Y Sbjct: 38 IPLRVHKLFVAYIVIVSVLGFIQGGLEGDSEYGFMLFLVNGPILFGTVLIHELGHCWATYRVGGTVEGILLWPLGGLAFIGHSGEAKEDLFVSVAGPLTHIPQMIVWVILLAASADGDATL--------TFSGAFFADLCRHAIVINLSLFLFNLFCPAYPLDGGRILVSCMLLCGVPVGTTANITVAVSAVFGLLIVCLG--------AVYLNFLTIFVGGWVCNQAWELYQIVRQGRLDLHPIFHKY 270
BLAST of NO18G01200 vs. NCBI_GenBank
Match: XP_007515298.1 (peptidase M50 [Bathycoccus prasinos] >CCO14177.1 peptidase M50 [Bathycoccus prasinos]) HSP 1 Score: 142.5 bits (358), Expect = 2.900e-30 Identity = 87/247 (35.22%), Postives = 124/247 (50.20%), Query Frame = 0 Query: 36 VPVKLHFLLPIFWVLS-----LLSGLAYGGTYIGFRFIIDVLILFVTVFAHELGHSYAAIQYSGKCHCITLWPLGGFAEVTHEQGPKEDLWVSFAGPLTHVPMCAIWYGIVAAVVRGPFNIMTIPCDLFNSQPCFWTNVCVSAGFLNICLFLFNLLIPAYPLDASRILVDFFALCKVEVNKAALITAGISMPIGLGLLCYGFWGFSRGAANYTMTLFLAIFILYSTWGVFKAARSGNAARHPMFVHY 278 + + LH LL +++V+S LL+ + ++++ +LF TV HELGH +A + G+ H I LWPLGG A + H K+DL VS AGPLTH+P +WYG+ A RG F M +CV A +LNI L LFNL IP YPLD RI L KV V+ AA I A +S+ LG+ YGF N + +F+ + ++ ++ + H +F Y Sbjct: 36 IEITLHPLLLLYFVISAALPWLLNSSTMTMKVWLYLVVVNIPLLFGTVLLHELGHCFATRKVGGEVHGILLWPLGGLAYIGHSGDAKDDLIVSIAGPLTHIPQALLWYGLSQAFTRGTFMDM----------------LCVQALWLNISLMLFNLFIPCYPLDGGRIFAASLQLMKVRVDIAAKICAFVSLVCALGIGLYGF------LYNEIIAMFIGFWCAQESYNLYVHTKEERLQEHQLFSKY 260 The following BLAST results are available for this feature:
BLAST of NO18G01200 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO18G01200 ID=NO18G01200|Name=NO18G01200|organism=Nannochloropsis oceanica|type=gene|length=2925bpback to top protein sequence of NO18G01200.1 >NO18G01200.1-protein ID=NO18G01200.1-protein|Name=NO18G01200.1|organism=Nannochloropsis oceanica|type=polypeptide|length=409bpback to top Synonyms
Publications
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