NO18G01200, NO18G01200 (gene) Nannochloropsis oceanica

Overview
NameNO18G01200
Unique NameNO18G01200
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2925
Alignment locationchr18:417760..420684 +

Link to JBrowse

Properties
Property NameValue
DescriptionStage iv sporulation protein fb
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr18genomechr18:417760..420684 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
BLAST of NO18G01200 vs. NCBI_GenBank
Match: EWM23303.1 (stage iv sporulation protein fb [Nannochloropsis gaditana])

HSP 1 Score: 545.4 bits (1404), Expect = 1.500e-151
Identity = 298/366 (81.42%), Postives = 315/366 (86.07%), Query Frame = 0
Query:    1 MNR-TGTGNNPAGVADNPFPKQWAWQMGTIHLKGQVVPVKLHFLLPIFWVLSLLSGLAYGGTYIGFRFIIDVLILFVTVFAHELGHSYAAIQYSGKCHCITLWPLGGFAEVTHEQGPKEDLWVSFAGPLTHVPMCAIWYGIVAAVVRGPFNIMTIPCDLFNSQPCFWTNVCVSAGFLNICLFLFNLLIPAYPLDASRILVDFFALCKVEVNKAALITAGISMPIGLGLLCYGFWGFSRGAANYTMTLFLAIFILYSTWGVFKAARSGNAARHPMFVHYYRTSVPVDXXXXXXXXXXXXXXXXXXXXXGGRIMSLWGGGSATAGADGDXXXXXXXXXXXXXXTAFSKMEAGKGHRLGGKAAPTGVPA 366
            MNR TGTGNNPAGVADNPFP QWAWQ+G I L+GQ VPVKLHFLLPIFWVLSLLSGLAYGGTYIGFRFI+DVLILF+TVF HE+GHS AAIQYSGKCHCITLWPLGGFAEVTHE+GPKEDLWVSFAGPLTH+PMCAIWYGIVAAVV+ PFNIM IPCDL +SQ CFWTNV VSAGFLN+CLFLFNL IPAYPLDASRILVDFFALC VEVN+AALITA IS PIGL LL YGFW F+RGAANYTMT+FLAIFILYSTWGV KAARSG AARHPMF+HYYRTS P           XXXXXXXXXXXXGG+I SLWG     +G    XXXXXXXXXXXXXX   SKMEAGKGHRLGGK   +  PA
Sbjct:    1 MNRNTGTGNNPAGVADNPFPNQWAWQIGAITLRGQRVPVKLHFLLPIFWVLSLLSGLAYGGTYIGFRFIVDVLILFMTVFIHEMGHSLAAIQYSGKCHCITLWPLGGFAEVTHEKGPKEDLWVSFAGPLTHIPMCAIWYGIVAAVVKRPFNIMAIPCDLLHSQACFWTNVAVSAGFLNMCLFLFNLFIPAYPLDASRILVDFFALCNVEVNRAALITACISFPIGLALLGYGFWAFARGAANYTMTIFLAIFILYSTWGVIKAARSGTAARHPMFIHYYRTSEP----PVSATAAXXXXXXXXXXXXGGQITSLWG-----SGXXXXXXXXXXXXXXXXXXXVLSKMEAGKGHRLGGKPVTSSTPA 357          
BLAST of NO18G01200 vs. NCBI_GenBank
Match: XP_005855970.1 (stage iv sporulation protein fb, partial [Nannochloropsis gaditana CCMP526] >EKU20379.1 stage iv sporulation protein fb, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 540.8 bits (1392), Expect = 3.600e-150
Identity = 296/366 (80.87%), Postives = 313/366 (85.52%), Query Frame = 0
Query:    1 MNR-TGTGNNPAGVADNPFPKQWAWQMGTIHLKGQVVPVKLHFLLPIFWVLSLLSGLAYGGTYIGFRFIIDVLILFVTVFAHELGHSYAAIQYSGKCHCITLWPLGGFAEVTHEQGPKEDLWVSFAGPLTHVPMCAIWYGIVAAVVRGPFNIMTIPCDLFNSQPCFWTNVCVSAGFLNICLFLFNLLIPAYPLDASRILVDFFALCKVEVNKAALITAGISMPIGLGLLCYGFWGFSRGAANYTMTLFLAIFILYSTWGVFKAARSGNAARHPMFVHYYRTSVPVDXXXXXXXXXXXXXXXXXXXXXGGRIMSLWGGGSATAGADGDXXXXXXXXXXXXXXTAFSKMEAGKGHRLGGKAAPTGVPA 366
            MNR TGTGNNPAGVADNPFP QWAWQ+G I L+GQ VPVKLHFLLPIFWVLSLLSGLAYGG YIGFRFI+DVLILF+TVF HE+GHS AAIQYSGKCHCITLWPLGGFAEVTHE+GPKEDLWVSFAGPLTH+PMCAIWYGIVAAVV+ PFNIM IPCDL +SQ CFWTNV VSAGFLN+CLFLFNL IPAYPLDASRILVDFFALC VEVN+AALITA IS PIGL LL YG W F+RGAANYTMT+FLAIFILYSTWGV KAARSG AARHPMF+HYYRTS P           XXXXXXXXXXXXGG+I SLWG     +G    XXXXXXXXXXXXXX   SKMEAGKGHRLGGK   +  PA
Sbjct:   34 MNRNTGTGNNPAGVADNPFPNQWAWQIGAITLRGQRVPVKLHFLLPIFWVLSLLSGLAYGGKYIGFRFIVDVLILFMTVFIHEMGHSLAAIQYSGKCHCITLWPLGGFAEVTHEKGPKEDLWVSFAGPLTHIPMCAIWYGIVAAVVKRPFNIMAIPCDLLHSQACFWTNVAVSAGFLNMCLFLFNLFIPAYPLDASRILVDFFALCNVEVNRAALITACISFPIGLALLGYGLWAFARGAANYTMTIFLAIFILYSTWGVIKAARSGTAARHPMFIHYYRTSEP----PVSATAAXXXXXXXXXXXXGGQITSLWG-----SGXXXXXXXXXXXXXXXXXXXVLSKMEAGKGHRLGGKPVTSSTPA 390          
BLAST of NO18G01200 vs. NCBI_GenBank
Match: PNH00507.1 (hypothetical protein TSOC_013667 [Tetrabaena socialis])

HSP 1 Score: 177.9 bits (450), Expect = 6.200e-41
Identity = 97/240 (40.42%), Postives = 136/240 (56.67%), Query Frame = 0
Query:   36 VPVKLHFLLPIFWVLSLLSGLAYGGTYIGFRFIIDVLILFVTVFAHELGHSYAAIQYSGKCHCITLWPLGGFAEVTHEQGPKEDLWVSFAGPLTHVPMCAIWYGIVAAVVRGPFNIMTIPCDL-FNSQPCFWTNVCVSAGFLNICLFLFNLLIPAYPLDASRILVDFFALCKVEVNKAALITAGISMPIGLGLLCYGFWGFSRGAANYTMTLFLAIFILYSTWGVFKAARSGNAARHPMF 275
            +P++LH +  +   L LL  L YG   +    I+   +L +TV  HELGH  AA    G+   + LWPLGG A + H  GPK D+WV+ AGPLTHVPM  IW  ++            I  D+ + S    W  VCV A  +N+ L  FNLL+PAYPLD  R+LVD      V    AA IT G+++P+GL +L YG   F        +T+ +A+FIL++T+ +F+A R+ + ARHP+F
Sbjct:   21 IPIRLHLIFLVVLALQLLGSLQYGLPQVLLWSILLGPVLLLTVLVHELGHCLAARSVGGQVDGVLLWPLGGLAFIGHTAGPKADMWVAVAGPLTHVPMVGIWLLLLLPAFHASTGSWAINLDMPWPSSGHLWHAVCVGAIIINLSLLAFNLLVPAYPLDGGRLLVDALLAAGVAPRLAAGITVGVAVPLGLLVLVYGILVFQ------MVTIMVAVFILFATFQLFQALRTDSLARHPLF 254          
BLAST of NO18G01200 vs. NCBI_GenBank
Match: XP_005649223.1 (hypothetical protein COCSUDRAFT_65471 [Coccomyxa subellipsoidea C-169] >EIE24679.1 hypothetical protein COCSUDRAFT_65471 [Coccomyxa subellipsoidea C-169])

HSP 1 Score: 158.3 bits (399), Expect = 5.100e-35
Identity = 88/241 (36.51%), Postives = 131/241 (54.36%), Query Frame = 0
Query:   36 VPVKLHFLLPIFWVLSLLSGLAYGGTYIGFRFIIDVLILFVTVFAHELGHSYAAIQYSGKCHCITLWPLGGFAEVTHEQGPKEDLWVSFAGPLTHVPMCAIWYGIVAAVVRGPFNIMTIPCDLFNSQPCFWTNVCVSAGFLNICLFLFNLLIPAYPLDASRILVDFFALCKVEVNKAALITAGISMPIGLGLLCYGFWGFSRGAANYTMTLFLAIFILYSTWGVFKAARSGNAARHPMFVH 277
            +PV+LHFL  +   L++LS        + +  ++   IL +TV+ HELGH  A+ +   + H I LWPLGG A V H   PK DL+VS +GPLTHVP   IW+ I+A       +  T    + + +  FW  +C  A  LN+ +  FNLL+PAYPLD  RI  D   LC V     A+IT  +++ I   L+    WG    A    +T+ + I++LY++  +  A ++G   +HPMF +
Sbjct:   19 IPVRLHFLFVVALFLAVLSQAFVSAQSVAWAVVLFGPILLLTVYIHELGHCLASRKVGAEVHGILLWPLGGLAFVGHSTSPKTDLFVSISGPLTHVPQFFIWFAILAVSSHVVHHGWTPSLSVPDPRQHFWLALCAGASQLNLYIMAFNLLLPAYPLDGGRIFADLLLLCGVNARTTAIITVVLAVAIAGALIA---WGIVEVA---ILTIAVGIWMLYTSAELGLAIKNGTVTQHPMFCY 253          
BLAST of NO18G01200 vs. NCBI_GenBank
Match: XP_001699886.1 (intramembrane metalloprotease [Chlamydomonas reinhardtii])

HSP 1 Score: 150.2 bits (378), Expect = 1.400e-32
Identity = 87/246 (35.37%), Postives = 131/246 (53.25%), Query Frame = 0
Query:   36 VPVKLHFLLPIFWVLSLLSGLAYGGTYIGFRFIIDVLILFVTVFAHELGHSYAAIQYSGKCHCITLWPLGGFAEVTHEQGPKEDLWVSFAGPLTHVPMCAIWYGIVAAVVRGPFNIMTIPCDLFNSQPCFWTNVCVSAG-FLNICLFLFNLLIPAYPLDASRILVDFFALCKVEVNKAALITAGISMPIGLGLLCYGFWGFSRGAANYTMTLFLAIFILYSTWGVFKAARSGNAARHPMFVHYYRT 281
            +P++LH    I   L LL+ +  GG  +    I+   +L  TV  HELGH  AA Q       I LWPLGG A +     PK D WV+ AGPLTH+P   +W  ++  V         +   +   +   + +   + G  +NI LF FNLL+PAYPLD  R+LVD      V   + A IT  +++P+GLG++ YGF+   +      +T+ +A FIL++T+ +++A R+   ARHP+F   Y +
Sbjct:   28 IPIELHASFFIVLGLQLLTSIPQGGWVVLLWSIVLGPMLLGTVLLHELGHCLAARQVGAHVSGILLWPLGGLAFIGQTPSPKADAWVALAGPLTHIPQVLVWLLLLLPVYHADTGSWAVKLYVPYPEAAHFLHSLFACGVIINISLFAFNLLVPAYPLDGGRLLVDGLLWAGVLPRRTAWITICVAVPLGLGVMVYGFYPHFQ-----MVTIMVAGFILFATYQLYQAVRADALARHPLFSAVYNS 268          
BLAST of NO18G01200 vs. NCBI_GenBank
Match: PNW87249.1 (hypothetical protein CHLRE_02g115050v5 [Chlamydomonas reinhardtii])

HSP 1 Score: 150.2 bits (378), Expect = 1.400e-32
Identity = 87/246 (35.37%), Postives = 131/246 (53.25%), Query Frame = 0
Query:   36 VPVKLHFLLPIFWVLSLLSGLAYGGTYIGFRFIIDVLILFVTVFAHELGHSYAAIQYSGKCHCITLWPLGGFAEVTHEQGPKEDLWVSFAGPLTHVPMCAIWYGIVAAVVRGPFNIMTIPCDLFNSQPCFWTNVCVSAG-FLNICLFLFNLLIPAYPLDASRILVDFFALCKVEVNKAALITAGISMPIGLGLLCYGFWGFSRGAANYTMTLFLAIFILYSTWGVFKAARSGNAARHPMFVHYYRT 281
            +P++LH    I   L LL+ +  GG  +    I+   +L  TV  HELGH  AA Q       I LWPLGG A +     PK D WV+ AGPLTH+P   +W  ++  V         +   +   +   + +   + G  +NI LF FNLL+PAYPLD  R+LVD      V   + A IT  +++P+GLG++ YGF+   +      +T+ +A FIL++T+ +++A R+   ARHP+F   Y +
Sbjct:   35 IPIELHASFFIVLGLQLLTSIPQGGWVVLLWSIVLGPMLLGTVLLHELGHCLAARQVGAHVSGILLWPLGGLAFIGQTPSPKADAWVALAGPLTHIPQVLVWLLLLLPVYHADTGSWAVKLYVPYPEAAHFLHSLFACGVIINISLFAFNLLVPAYPLDGGRLLVDGLLWAGVLPRRTAWITICVAVPLGLGVMVYGFYPHFQ-----MVTIMVAGFILFATYQLYQAVRADALARHPLFSAVYNS 275          
BLAST of NO18G01200 vs. NCBI_GenBank
Match: PSC73964.1 (peptidase M50 [Micractinium conductrix])

HSP 1 Score: 149.8 bits (377), Expect = 1.800e-32
Identity = 88/241 (36.51%), Postives = 119/241 (49.38%), Query Frame = 0
Query:   36 VPVKLHFLLPIFWVLSLLS--GLAYGGTYIGFRFIIDVLILFVTVFAHELGHSYAAIQYSGKCHCITLWPLGGFAEVTHEQGPKEDLWVSFAGPLTHVPMCAIWYGIVAAVVRGPFNIMTIPCDLFNSQPCFWTNVCVSAGFLNICLFLFNLLIPAYPLDASRILVDFFALCKVEVNKAALITAGISMPIGLGLLCYGFWGFSRGAANYTMTLFLAIFILYSTWGVFKAARSGNAARHPMF 275
            VPV++H   PIF+ L L++                            HELGHS AA +  G    I LWPLGG A + H  GPK DL ++ AGP TH+P   +W+ I+  +        T    + N    F   V   A  LNI L  FNLL+PAYPLD  R+  D   L  V   +AA  TAG+++  G  ++  G W  S       MT+ + +++LYSTWG+ +A R G  A+HPMF
Sbjct:   18 VPVRMHMTFPIFFALGLVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXHELGHSLAARRLGGHAEGILLWPLGGLAYLAHSSGPKADLLIALAGPATHIPQFLVWFAILFPLHHAATGSWTPSLTIPNPSWSFGLAVVAGACQLNIALAAFNLLLPAYPLDGGRVFADTLLLAGVAPERAAKATAGVAVVGGCAVVGLGIWQSS------YMTIAVGLWMLYSTWGLVEAIRRGAVAQHPMF 252          
BLAST of NO18G01200 vs. NCBI_GenBank
Match: GAQ83013.1 (peptidase m50 domain protein [Klebsormidium nitens])

HSP 1 Score: 149.1 bits (375), Expect = 3.100e-32
Identity = 87/240 (36.25%), Postives = 132/240 (55.00%), Query Frame = 0
Query:   36 VPVKLHFLLPIFWVLSLLSGLAYGGTYIGFRFIIDVLILFVTVFAHELGHSYAAIQY-SGKCHCITLWPLGGFAEVTHEQGPKEDLWVSFAGPLTHVPMCAIWYGIVAAVVRGPFNIMTIPCDLFNSQPCFWTNVCVSAGFLNICLFLFNLLIPAYPLDASRILVDFFALCKVEVNKAALITAGISMPIGLGLLCYGFWGFSRGAANYTMTLFLAIFILYSTWGVFKAARSGNAARHPMF 275
            +PV++ +  PI  VL++L GL+ G   I +   +   +LF TV  HE GHS A ++  +G    I LWPLGG A   H   P +D  V+  GPLTH+P  AIW  I+ A+ R     + +   + +    FWTN+  +A  +NI LF FNLL+PAYPLD  RIL D    C V    AA++T  I+ PI + ++ YG +  +       MT+ + +++L+  + +    R+G   +HP+F
Sbjct:   36 IPVRVSYFFPIVIVLAVLDGLSEGWMSILWYVTLFGPLLFGTVLVHEFGHSLACLKLANGHVDQILLWPLGGLAYCGHGGSPIDDFKVAICGPLTHIPQTAIWLAIL-AISRPDDVSLNVYAPVGDH---FWTNLVAAAIMVNIALFCFNLLLPAYPLDGGRILADLLLSCGVSSKVAAIVTLCIATPIAVLIVMYGIYNVA------IMTIAVGVWVLFQNFSLAVLVRNGQVDQHPLF 265          
BLAST of NO18G01200 vs. NCBI_GenBank
Match: XP_002508232.1 (predicted protein [Micromonas commoda] >ACO69490.1 predicted protein [Micromonas commoda])

HSP 1 Score: 148.3 bits (373), Expect = 5.200e-32
Identity = 92/249 (36.95%), Postives = 128/249 (51.41%), Query Frame = 0
Query:   36 VPVKLHFL----LPIFWVLSLLSGLAYGGTYIGFR-FIIDVLILFVTVFAHELGHSYAAIQYSGKCHCITLWPLGGFAEVTHEQGPKEDLWVSFAGPLTHVPMCAIWYGIVAAVVRGPFNIMTIPCDLFNSQPCFWTNVCVSAGFLNICLFLFNLLIPAYPLDASRILVDFFALCKVEVNKAALITAGISMPIGLGLLCYGFWGFSRGAANYT--MTLFLAIFILYSTWGVFKAARSGNAARHPMFVHY 278
            +P+++H L    + I  VL  + G   G +  GF  F+++  ILF TV  HELGH +A  +  G    I LWPLGG A + H    KEDL+VS AGPLTH+P   +W  ++AA   G   +             F+ ++C  A  +N+ LFLFNL  PAYPLD  RILV    LC V V   A IT  +S   GL ++C G        A Y   +T+F+  ++    W +++  R G    HP+F  Y
Sbjct:   38 IPLRVHKLFVAYIVIVSVLGFIQGGLEGDSEYGFMLFLVNGPILFGTVLIHELGHCWATYRVGGTVEGILLWPLGGLAFIGHSGEAKEDLFVSVAGPLTHIPQMIVWVILLAASADGDATL--------TFSGAFFADLCRHAIVINLSLFLFNLFCPAYPLDGGRILVSCMLLCGVPVGTTANITVAVSAVFGLLIVCLG--------AVYLNFLTIFVGGWVCNQAWELYQIVRQGRLDLHPIFHKY 270          
BLAST of NO18G01200 vs. NCBI_GenBank
Match: XP_007515298.1 (peptidase M50 [Bathycoccus prasinos] >CCO14177.1 peptidase M50 [Bathycoccus prasinos])

HSP 1 Score: 142.5 bits (358), Expect = 2.900e-30
Identity = 87/247 (35.22%), Postives = 124/247 (50.20%), Query Frame = 0
Query:   36 VPVKLHFLLPIFWVLS-----LLSGLAYGGTYIGFRFIIDVLILFVTVFAHELGHSYAAIQYSGKCHCITLWPLGGFAEVTHEQGPKEDLWVSFAGPLTHVPMCAIWYGIVAAVVRGPFNIMTIPCDLFNSQPCFWTNVCVSAGFLNICLFLFNLLIPAYPLDASRILVDFFALCKVEVNKAALITAGISMPIGLGLLCYGFWGFSRGAANYTMTLFLAIFILYSTWGVFKAARSGNAARHPMFVHY 278
            + + LH LL +++V+S     LL+          +  ++++ +LF TV  HELGH +A  +  G+ H I LWPLGG A + H    K+DL VS AGPLTH+P   +WYG+  A  RG F  M                +CV A +LNI L LFNL IP YPLD  RI      L KV V+ AA I A +S+   LG+  YGF        N  + +F+  +    ++ ++   +      H +F  Y
Sbjct:   36 IEITLHPLLLLYFVISAALPWLLNSSTMTMKVWLYLVVVNIPLLFGTVLLHELGHCFATRKVGGEVHGILLWPLGGLAYIGHSGDAKDDLIVSIAGPLTHIPQALLWYGLSQAFTRGTFMDM----------------LCVQALWLNISLMLFNLFIPCYPLDGGRIFAASLQLMKVRVDIAAKICAFVSLVCALGIGLYGF------LYNEIIAMFIGFWCAQESYNLYVHTKEERLQEHQLFSKY 260          
The following BLAST results are available for this feature:
BLAST of NO18G01200 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM23303.11.500e-15181.42stage iv sporulation protein fb [Nannochloropsis g... [more]
XP_005855970.13.600e-15080.87stage iv sporulation protein fb, partial [Nannochl... [more]
PNH00507.16.200e-4140.42hypothetical protein TSOC_013667 [Tetrabaena socia... [more]
XP_005649223.15.100e-3536.51hypothetical protein COCSUDRAFT_65471 [Coccomyxa s... [more]
XP_001699886.11.400e-3235.37intramembrane metalloprotease [Chlamydomonas reinh... [more]
PNW87249.11.400e-3235.37hypothetical protein CHLRE_02g115050v5 [Chlamydomo... [more]
PSC73964.11.800e-3236.51peptidase M50 [Micractinium conductrix][more]
GAQ83013.13.100e-3236.25peptidase m50 domain protein [Klebsormidium nitens... [more]
XP_002508232.15.200e-3236.95predicted protein [Micromonas commoda] >ACO69490.1... [more]
XP_007515298.12.900e-3035.22peptidase M50 [Bathycoccus prasinos] >CCO14177.1 p... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL008nonsL008Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR064ncniR064Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR060ncniR060Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR043ngnoR043Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003976NSK003976Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO18G01200.1NO18G01200.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|674433gene_9522Nannochloropsis oceanica (N. oceanica CCMP1779)gene
jgi.p|Nanoce1779_2|607884gene_9045Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100053g10gene7119Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO18G01200.1NO18G01200.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO18G01200 ID=NO18G01200|Name=NO18G01200|organism=Nannochloropsis oceanica|type=gene|length=2925bp
ATAGAGAGATGATGCCCAAGTTATGCCTTCTCCCCGAAACAGTGCATAGC
ATACCCCTCAAACGCCGAGTCCCATTGATCCTTCAATGCGCACAACCCAC
AACCAGCACTTTGTTGCCTCGGAGCTGTCGCACGCTCCTTCTATTCCTCC
CACCGCATACTTGACAGGCGCAAACTAAAGCTGCTTCTGGGCCTTGCTTC
GTCGTGCTCTGGGTTGTTCTGCTATCGCTTCCCGCGCTACGACGTCCAAG
CGCACAATACCGACGCTCATCTCTTTTCTCGAACCTGTCACCATCACAGT
ATACTCAGAAGCCTGTCTATTCTTACTTCTCCGCGGTTTTCTTTTCACCC
AAGTCCCCTATTCAGCCACGGCCAGTAACACGCCCCTCATCATGAACCGC
ACTGGCACGGGCAACAACCCGGCTGGCGTTGCGGACAATCCCTTCCCGAA
GCAATGGGCATGGCAAATGGGCACGATTCATCTCAAGGGGCAGGTGGTGC
CGGTCAAGCTTCATTTCCTGCTCCCCATTTTCTGGGTCTTGAGCTTGCTG
TCCGGCCTGGCGTATGGAGGGACTTACATTGGTTTTCGGTTTATCATCGA
TGTGCTCATCTTATTCGTGACAGTGTTTGCCCACGAGCTCGGGCATAGTT
ACGCCGCCATTCAGTACAGTGGGAAATGCCATTGTATTACTCTGTGGCCC
CTTGGGGGTTTTGCGGAAGTCACGCATGAGCAGGGCCCGAAGGAGGACTT
GTGGGTGTCGTTTGCTGGCCCGTTGACGCACGTGCCGATGTGCGCTATTT
GGTATGGAATTGTCGCGGCGGTTGTAAGGGGACCCTTCAATATTATGAgt
acgtacgagggttgtgtgtgtcattattgagggtttgttccatccaacgc
aatcctcaacctcctctctcttctctcccccatcccctttagCCATCCCG
TGCGATCTTTTCAACTCTCAACCCTGCTTCTGGACCAATGTCTGCGTCTC
CGCCGGCTTTTTGAATATCTGCCTGTTTCTCTTCAACCTGTTGATCCCCG
CCTACCCCCTGGACGCCTCCCGCATTCTCGTCGATTTTTTCGCTTTGTGC
AAAGTAGAAGTAAACAAGGCGGCGCTCATAACGGCAGGGATTTCTATGCC
CATCGGTTTGGGGTTGCTATGCTATGGGTTTTGGGGTTTTTCCAGGGGGG
CAGCTAACTATACAATGACTCTTTTTCTTGCTATTTTTATCCTGTACTCC
ACCTGGGGGGTGTTTAAGGCCGCCCGATCGGGCAACGCTGCCAGGCATCC
TATGTTTGTTCATTACTATCGCACCAGCGTGCCAGTCGACGCCTCAAGCA
GCAGTAGCAGCAGCAGTAGCACTACGGGTTTTGGAGCAGCGAACGCAACA
GCTGGAGGGAGAATCATGTCGCTGTGGGGAGGGGGGAGTGCCACGGCTGG
CGCGGATGGGGATCCTGCTGGTACGGGCGGACCTGTTGCTACAAGTGGTG
GGGTCACTGCCTTCTCAAAAATGGAAGCAGGCAAGGGGCATCGGTTGGGA
GGGAAGGCGGCACCAACAGGAGTGCCTGCAGCAGCACCAGTGGGAGGAGG
GAGGAGCACGAGTCAATCGGCCTTGTTGTCCTCGCAGGGGTCCTCGTCGT
CATCTAATATTTTGGGAGGGCCACCCGGTGGGAAGGGTGGTCATCGGTTG
GGCTCAAAATAACAAGGAGGGGGAAAGGAAGGGTAGAAGGATGTGAGATG
CGATGTGAAAAAATGAGTGTTGCGGAAATTGAGTCTTTCTGTGACCGTGG
TATGCAAACAGAAGAAGCAATCAAGTGAGGGAAAAGAGAAGCATAAGGAA
TCAGTAGTCAAAAAGAGGAAGAAGAGGTCGTGTACATTGATGGCGGGATC
TGCCACGGACTTGAGAGAGACGCCTTATATTTCATAAAGTTATCCCTTCC
ATTACTCTCGTACAATCACAATATAACAAGAAAAAGAAACAGACGAAAGT
ATGATAAAAAAGAGGCCAAAGCATCAGCGGCACACCATCATCCAACACAA
AAAGAATGAACTAAGAGTGAGGAGGAAACTGATTGACAACGAGAGGACAA
ATGATTTCATCTCTCTTTTGGGATTGTTCAGGAGGAAAATGATAGGCAAT
GAGAAAGCAACTTGTTTCATCTCTCTTTTCGGGTTGTTCTTTCCTTGTGC
AAATCGCTCCTTCCGCCGCCCTTCCTTTTTACACCATCCTAGTTGGCCGC
TTCTCCTACTTTTCTTAGACCTTTTCCTAGTCTTGCCCCTCTTCTTCTCT
TCGGGGCTGTCCCCCACCTTGCCACTCTTTCTGTCGACCCACCAAGCTCC
TAATTGACTCTTTCTCCGTCGTTTTTCATCCAAGCCCAATGCCATCTTTC
ACCTCCATCTCTTTCCCCGCACCTGCTGGCCTGAGGGTATGGAAATAAAC
CTCACTTTATCTCTATATTCCTTTCGCTGCCATCCCCCTCGTGTTGTTTC
CCTCCTCCCTATCCCGCGATTCCTACGTCTCCTCTCTTCCTCCCTTCCAC
CTCTCCACCGGCGTGGAGAGGGAAAGACAATAGCAGCAGCAGCAGCAGCA
GCAGCGAGTAGCGGGCATGCTTGCATATTGTGCATTGTGATTATTTTATT
TTTCCCACCCACAAATGGAAAGCCCGCACGCGAGCTTCCTTCATATTTGC
CTACCATCCACCGCTATCCACTCGACGCATCAGTCCTATCGCACCCGATT
TTCTCTCTGTTCGCACTCTCTTGTTCCTCTCCTCCTTCTGTCTGTATGTA
ACTCTTTCGCAGCCCAAAAGAGAGCAAGAAGTAAGACAAGACGACTTTTT
CCTCTTCTTCAGTCTACCAGTTGGAACACACAAGAAATGCGCACAACACA
TACACACACACACACACACACACAC
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protein sequence of NO18G01200.1

>NO18G01200.1-protein ID=NO18G01200.1-protein|Name=NO18G01200.1|organism=Nannochloropsis oceanica|type=polypeptide|length=409bp
MNRTGTGNNPAGVADNPFPKQWAWQMGTIHLKGQVVPVKLHFLLPIFWVL
SLLSGLAYGGTYIGFRFIIDVLILFVTVFAHELGHSYAAIQYSGKCHCIT
LWPLGGFAEVTHEQGPKEDLWVSFAGPLTHVPMCAIWYGIVAAVVRGPFN
IMTIPCDLFNSQPCFWTNVCVSAGFLNICLFLFNLLIPAYPLDASRILVD
FFALCKVEVNKAALITAGISMPIGLGLLCYGFWGFSRGAANYTMTLFLAI
FILYSTWGVFKAARSGNAARHPMFVHYYRTSVPVDASSSSSSSSSTTGFG
AANATAGGRIMSLWGGGSATAGADGDPAGTGGPVATSGGVTAFSKMEAGK
GHRLGGKAAPTGVPAAAPVGGGRSTSQSALLSSQGSSSSSNILGGPPGGK
GGHRLGSK*
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Synonyms
Publications