NO18G01080, NO18G01080 (gene) Nannochloropsis oceanica

Overview
NameNO18G01080
Unique NameNO18G01080
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2029
Alignment locationchr18:381920..383948 -

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Properties
Property NameValue
DescriptionProtein root UVB sensitive 2, chloroplastic
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr18genomechr18:381920..383948 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR006968RUS_fam
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
BLAST of NO18G01080 vs. NCBI_GenBank
Match: EWM23329.1 (uncharacterized protein Naga_100053g25 [Nannochloropsis gaditana])

HSP 1 Score: 648.7 bits (1672), Expect = 1.700e-182
Identity = 340/445 (76.40%), Postives = 378/445 (84.94%), Query Frame = 0
Query:  112 EVLSLRLLAEDGLRALLPRGYPRSVQKGYAEYVKLQMTASLASSAIGVLSTQSLLYAMGLGAGAIPLAAALNWIIKDGIGQVGGIIFASVVNDRFDANPKRWKMVATISLDLSCALELLAPLAPGSFLAIASLANVGKNVCFLSASASRAAIHNSFAKRENLADITAKAGSQFIVTSILGTGLGIALSTALGSSWMALAPICAGLSFVHISCNYLSLRHVCLNTINAERMELIMQHYVLTGRIPAPGDISPIERFMTPAIYDTVAPSALVARLPSLRMGRHLDEVASLEQLPRLARLFEKEKYVLNAKGRRGDGTATVDVLMKEEANVHDVLKACVHSYYVRKEAGREGGWKAPRVQSAWARLMEKKEVERSDTWLIDLVESTHKTLYRPSSGAGGAREGGREDGRGKHLTMVDDIVGQLTRAGWLTDSVFFPHTQNRISFEGGA 557
            E+LS RL+ ED LRALLPRGYPRSVQKGY EYVKLQMTASLASSA+GVLSTQSLLYAMGLGAGAIPLAAALNWIIKDGIGQVGGI+FASVVNDRFDANPKRWKMVATISLDLSC LELLAPLAP  FLAIASLANVGKNVCFLSASASRAAIHNSFAKRENLADITAKAGSQFIVTSILGTGLGIALSTALGSSWMALAPICAGLSF+HISCNYLSLRHVCLNT+NAER EL++  +   GRIP PG++S  E FM PAIYDTVAPSAL + LP LRMGR L EVAS  QL RLARLF ++ Y+LNA+GR  DGTATVDVLMKE+A+V DVL+AC+H+YYVR+EA    GWKAP   SAW ++  ++  E  +TWL++LVE TH+ L +P   + G  E        + +T VDDIVGQ+ +AGWL DSVFFPHTQNR++FEG A
Sbjct:  100 EILSPRLVLEDALRALLPRGYPRSVQKGYVEYVKLQMTASLASSAVGVLSTQSLLYAMGLGAGAIPLAAALNWIIKDGIGQVGGIVFASVVNDRFDANPKRWKMVATISLDLSCGLELLAPLAPAYFLAIASLANVGKNVCFLSASASRAAIHNSFAKRENLADITAKAGSQFIVTSILGTGLGIALSTALGSSWMALAPICAGLSFIHISCNYLSLRHVCLNTLNAERAELVLDRFWSQGRIPHPGEVSGEECFMWPAIYDTVAPSALKSGLPILRMGRPLHEVASPRQLVRLARLFARDGYLLNARGRARDGTATVDVLMKEDASVEDVLRACIHAYYVRREASAR-GWKAPPPPSAWTQMTGRRTEEGLETWLLELVEETHRALQQPVVHSPGPSE-------EETITRVDDIVGQVKQAGWLIDSVFFPHTQNRVAFEGVA 536          
BLAST of NO18G01080 vs. NCBI_GenBank
Match: CBN75993.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 266.9 bits (681), Expect = 1.400e-67
Identity = 172/446 (38.57%), Postives = 254/446 (56.95%), Query Frame = 0
Query:  124 LRALLPRGYPRSVQKGYAEYVKLQMTASLASSAIGVLSTQSLLYAMGLGAGAIPLAAALNWIIKDGIGQVGGIIFASVVNDRFDANPKRWKMVATISLDLSCALELLAPLAPGSFLAIASLANVGKNVCFLSASASRAAIHNSFAKRENLADITAKAGSQFIVTSILGTGLGIALSTALGSSWMALAPICAGLSFVHISCNYLSLRHVCLNTINAERMELIMQHYVLTGR---IPAPGDISPIERFMTPAIYDTVAPSALVARLPSLRMGRHLDE-VASLEQLPRLARLFEKEKYVLNAKGRRGDGTATVDVLMKEEANVHDVLKACVHSYYVRKEAGREGGWKAPRVQSAWARLMEKKEVERSDTWLIDLVESTHK----------------TLYRPSSGAGGAREGG-----REDG-RGKHLTMV-DDIVGQLTRAGWLTDSVF 543
            L  +LP G+P SV   Y  Y   Q T   AS+A GV+STQ+LLYAMGLGAGA+PLAA LNW+IKDG+GQ+GG+ F+S+V+ RFDANPK W++VA +SLD S  LELL+PLAP  FL IAS+AN+GKNV FL+ASASRAAIHN  + + NLAD+TAK+G+Q I+  + GTG G+ LS +LGS + A+ P C  LS VH+  N++S+R + + T + +R+EL++       R   +P+P DI+  E  +  A+ + +     +   P++ +G  L E V    +L  L R+ E   ++L+ +G     T  V VL+ E     +VL     +   ++     G  ++   + A       KEV  +   L +++E   +                    P+   GG  E G     +E G   +H  M+  ++  +  R+GW T ++F
Sbjct:    2 LGLVLPSGFPASVHPPYMAYAGWQFTGMAASAAAGVMSTQALLYAMGLGAGALPLAATLNWVIKDGLGQLGGVAFSSLVSTRFDANPKLWRVVAAVSLDASMVLELLSPLAPAYFLPIASVANIGKNVSFLAASASRAAIHNVLSLKGNLADVTAKSGAQTILACMAGTGAGVTLSASLGSEFHAIVPACLCLSVVHLGANHMSMRRLGIPTFDHQRLELVVNGMADGDRSRGMPSPQDIAAQEDVVAYAVREKIG----LDLSPTVVVGSRLKEAVKGWGELEELCRVCEGLPFLLSVRGDLAHRTGEVHVLLLEGCGAREVLAGSYVALVAKRLLLERGLRRSRGRRRAGTLTRGGKEVAPTGDILPEVIEEALRQGAALLASPPAPPSPIVSSSPTDTQGGQEEVGEAPTLQEQGDAARHGRMIARELSARAERSGWNTSALF 443          
BLAST of NO18G01080 vs. NCBI_GenBank
Match: KUF91713.1 (hypothetical protein AM588_10004546 [Phytophthora nicotianae] >KUF93824.1 hypothetical protein AM587_10010451 [Phytophthora nicotianae])

HSP 1 Score: 253.8 bits (647), Expect = 1.200e-63
Identity = 167/387 (43.15%), Postives = 231/387 (59.69%), Query Frame = 0
Query:  128 LPRGYPRSVQKGYAEYVKLQMTASLASSAIGVLSTQSLLYAMGLGAGAIPLAAALNWIIKDGIGQVGGIIFASVVNDRFDANPKRWKMVATISLDLSCALELLAPLAPGSFLAIASLANVGKNVCFLSASASRAAIHNSFAKRENLADITAKAGSQFIVTSILGTGLGIALSTALGSSWMALAPICAGLSFVHISCNYLSLRHVCLNTINAERMELIMQHYVLTG----RIPAPGDISPIERFMTPAI--YDTVAPSALVARLPSLRMGRHLDEVASLEQLP--------RLARLFEKEKYVLNAKGRRGDGTATVDVLMKEEANVHDVLKACVHSYYVRKEAGREGGWKAPRVQSAWARLMEKKEVER---SDTWLIDLVESTHKT 498
            LP+    SV K Y  Y K     S+AS A GVLS QSLLYA+GLGAGAIP AAA+NW++KDG+GQ GG++FAS+VN+R+DA+PKRW++ ++I+LD++   E+L PLAPGSFLAIASLANV KNV +LSASA+RA  HNSFA RENLAD+TAKAGSQ I +SI GTGLGI +S   G+  + +    + LS VH++  Y S+  V L T+N +R+ +I  H++ +      IP+   +S  E F+   +  Y T+   +++             E A+L+QL         RL   +  EKY+LN       G   +D+ ++E A   D L  C H + V  +   EG        +AW  L+E K  +    +D ++  L ES   T
Sbjct:  110 LPKDAHTSVTKDYFPYAKWSFVGSIASCAAGVLSMQSLLYAVGLGAGAIPTAAAVNWVLKDGLGQFGGVLFASIVNNRYDADPKRWRIASSIALDIAVLGEILTPLAPGSFLAIASLANVAKNVAWLSASATRAGFHNSFAIRENLADVTAKAGSQGIASSIFGTGLGILISQWTGAHTLNVVAAFSVLSAVHMTSTYKSVDCVQLRTLNCQRLHIIATHFLKSSSEAREIPSMKTVSSREVFIPTMLTGYQTLHDKSVI------------HEDATLDQLSQDNPDILGRLKDFYGVEKYLLNLT-LMERGAHRIDLALEENATPQDAL--CAHLHAVLIQLALEGA----VTPNAW-ELVEAKYYDAQALNDEFIARLEESMWHT 476          
BLAST of NO18G01080 vs. NCBI_GenBank
Match: ETI53067.1 (hypothetical protein F443_03939 [Phytophthora parasitica P1569])

HSP 1 Score: 252.3 bits (643), Expect = 3.600e-63
Identity = 154/340 (45.29%), Postives = 213/340 (62.65%), Query Frame = 0
Query:  128 LPRGYPRSVQKGYAEYVKLQMTASLASSAIGVLSTQSLLYAMGLGAGAIPLAAALNWIIKDGIGQVGGIIFASVVNDRFDANPKRWKMVATISLDLSCALELLAPLAPGSFLAIASLANVGKNVCFLSASASRAAIHNSFAKRENLADITAKAGSQFIVTSILGTGLGIALSTALGSSWMALAPICAGLSFVHISCNYLSLRHVCLNTINAERMELIMQHYVLTG----RIPAPGDISPIERFMTPAI--YDTVAPSALVARLPSLRMGRHLDEVASLEQLP--------RLARLFEKEKYVLNAKGRRGDGTATVDVLMKEEANVHDVLKACVHSYYVR 454
            LP+    SV K Y  Y K     S+AS A GVLS QSLLYA+GLGAGAIP AAA+NW++KDG+GQ GG++FAS+VN+R+DA+PKRW++ ++I+LD++   E+L PLAPGSFLAIASLANV KNV +LSASA+RA  HNSFA RENLAD+TAKAGSQ I +SI GTGLGI +S   G+  + +    + LS VH+   Y S+  V L T+N +R+ +I  H++ +      IP+   +S  E F+   +  Y T+   +++             E A+L+QL         RL   +  EKY+LN       G   +D+ ++E A   D L A +H+  ++
Sbjct:  110 LPKDAHTSVTKDYFPYAKWSFVGSIASCAAGVLSMQSLLYAVGLGAGAIPTAAAVNWVLKDGLGQFGGVLFASIVNNRYDADPKRWRIASSIALDIAVLGEILTPLAPGSFLAIASLANVAKNVAWLSASATRAGFHNSFAIRENLADVTAKAGSQGIASSIFGTGLGILISQWTGAHTLNVVAAFSVLSAVHMISTYKSVDCVQLRTLNCQRLHIIATHFLKSSSEAREIPSMKTVSEREVFIPTMLTGYQTLHDKSVI------------HEDATLDQLSQDNPDILGRLKDFYGVEKYLLNLT-LMERGAHRIDLALEENATPQDALCAHLHAVLIQ 436          
BLAST of NO18G01080 vs. NCBI_GenBank
Match: ETM52635.1 (hypothetical protein L914_03791 [Phytophthora parasitica] >ETO81758.1 hypothetical protein F444_03997 [Phytophthora parasitica P1976])

HSP 1 Score: 252.3 bits (643), Expect = 3.600e-63
Identity = 154/340 (45.29%), Postives = 213/340 (62.65%), Query Frame = 0
Query:  128 LPRGYPRSVQKGYAEYVKLQMTASLASSAIGVLSTQSLLYAMGLGAGAIPLAAALNWIIKDGIGQVGGIIFASVVNDRFDANPKRWKMVATISLDLSCALELLAPLAPGSFLAIASLANVGKNVCFLSASASRAAIHNSFAKRENLADITAKAGSQFIVTSILGTGLGIALSTALGSSWMALAPICAGLSFVHISCNYLSLRHVCLNTINAERMELIMQHYVLTG----RIPAPGDISPIERFMTPAI--YDTVAPSALVARLPSLRMGRHLDEVASLEQLP--------RLARLFEKEKYVLNAKGRRGDGTATVDVLMKEEANVHDVLKACVHSYYVR 454
            LP+    SV K Y  Y K     S+AS A GVLS QSLLYA+GLGAGAIP AAA+NW++KDG+GQ GG++FAS+VN+R+DA+PKRW++ ++I+LD++   E+L PLAPGSFLAIASLANV KNV +LSASA+RA  HNSFA RENLAD+TAKAGSQ I +SI GTGLGI +S   G+  + +    + LS VH+   Y S+  V L T+N +R+ +I  H++ +      IP+   +S  E F+   +  Y T+   +++             E A+L+QL         RL   +  EKY+LN       G   +D+ ++E A   D L A +H+  ++
Sbjct:  110 LPKDAHTSVTKDYFPYAKWSFVGSIASCAAGVLSMQSLLYAVGLGAGAIPTAAAVNWVLKDGLGQFGGVLFASIVNNRYDADPKRWRIASSIALDIAVLGEILTPLAPGSFLAIASLANVAKNVAWLSASATRAGFHNSFAIRENLADVTAKAGSQGIASSIFGTGLGILISQWTGAHTLNVVAAFSVLSAVHMISTYKSVDCVQLRTLNCQRLHIIATHFLKSSSEAREIPSMKTVSEREVFIPTMLTGYQTLHDKSVI------------HEDATLDQLSQDNPDILGRLKDFYGVEKYLLNLT-LMERGAHRIDLALEENATPQDALCAHLHAVLIQ 436          
BLAST of NO18G01080 vs. NCBI_GenBank
Match: ETL46337.1 (hypothetical protein L916_03772 [Phytophthora parasitica])

HSP 1 Score: 251.9 bits (642), Expect = 4.700e-63
Identity = 153/340 (45.00%), Postives = 213/340 (62.65%), Query Frame = 0
Query:  128 LPRGYPRSVQKGYAEYVKLQMTASLASSAIGVLSTQSLLYAMGLGAGAIPLAAALNWIIKDGIGQVGGIIFASVVNDRFDANPKRWKMVATISLDLSCALELLAPLAPGSFLAIASLANVGKNVCFLSASASRAAIHNSFAKRENLADITAKAGSQFIVTSILGTGLGIALSTALGSSWMALAPICAGLSFVHISCNYLSLRHVCLNTINAERMELIMQHYVLTG----RIPAPGDISPIERFMTPAI--YDTVAPSALVARLPSLRMGRHLDEVASLEQLP--------RLARLFEKEKYVLNAKGRRGDGTATVDVLMKEEANVHDVLKACVHSYYVR 454
            LP+    SV K Y  Y K     S+AS A GVLS QSLLYA+GLGAGAIP AAA+NW++KDG+GQ GG++FAS+VN+R+DA+PKRW++ ++I+LD++   E+L PLAPGSFLAIASLANV KNV +LSASA+RA  HNSFA RENLAD+TAKAGSQ I +SI GTGLGI +S   G+  + +    + LS  H++  Y S+  V L T+N +R+ +I  H++ +      IP+   +S  E F+   +  Y T+   +++             E A+L+QL         RL   +  EKY+LN       G   +D+ ++E A   D L A +H+  ++
Sbjct:  110 LPKDAHTSVTKDYFPYAKWSFVGSIASCAAGVLSMQSLLYAVGLGAGAIPTAAAVNWVLKDGLGQFGGVLFASIVNNRYDADPKRWRIASSIALDIAVLGEILTPLAPGSFLAIASLANVAKNVAWLSASATRAGFHNSFAIRENLADVTAKAGSQGIASSIFGTGLGILISQWTGAHTLNVVAAFSVLSAAHMTSTYKSVDCVQLRTLNCQRLHIIATHFLKSSSEAREIPSMKTVSEREVFIPTMLTGYQTLHDKSVI------------HEDATLDQLSQDNPDILGRLKDFYGVEKYLLNLT-LMERGAHRIDLALEENATPQDALCAHLHAVLIQ 436          
BLAST of NO18G01080 vs. NCBI_GenBank
Match: XP_008901149.1 (hypothetical protein PPTG_08002 [Phytophthora parasitica INRA-310] >ETL99476.1 hypothetical protein L917_03686 [Phytophthora parasitica] >ETN13065.1 hypothetical protein PPTG_08002 [Phytophthora parasitica INRA-310])

HSP 1 Score: 251.5 bits (641), Expect = 6.200e-63
Identity = 154/340 (45.29%), Postives = 212/340 (62.35%), Query Frame = 0
Query:  128 LPRGYPRSVQKGYAEYVKLQMTASLASSAIGVLSTQSLLYAMGLGAGAIPLAAALNWIIKDGIGQVGGIIFASVVNDRFDANPKRWKMVATISLDLSCALELLAPLAPGSFLAIASLANVGKNVCFLSASASRAAIHNSFAKRENLADITAKAGSQFIVTSILGTGLGIALSTALGSSWMALAPICAGLSFVHISCNYLSLRHVCLNTINAERMELIMQHYVLTG----RIPAPGDISPIERFMTPAI--YDTVAPSALVARLPSLRMGRHLDEVASLEQLP--------RLARLFEKEKYVLNAKGRRGDGTATVDVLMKEEANVHDVLKACVHSYYVR 454
            LP+    SV K Y  Y K     S+AS A GVLS QSLLYA+GLGAGAIP AAA+NW++KDG+GQ GG++FAS+VN+R+DA+PKRW++ ++I+LD++   E+L PLAPGSFLAIASLANV KNV +LSASA+RA  HNSFA RENLAD+TAKAGSQ I +SI GTGLGI +S   G+  + +    + LS VH+   Y S+  V L T+N +R+ +I  H++        IP+   +S  E F+   +  Y T+   +++             E A+L+QL         RL   +  EKY+LN       G   +D+ ++E A   D L A +H+  ++
Sbjct:  110 LPKDAHTSVTKDYFPYAKWSFVGSIASCAAGVLSMQSLLYAVGLGAGAIPTAAAVNWVLKDGLGQFGGVLFASIVNNRYDADPKRWRIASSIALDIAVLGEILTPLAPGSFLAIASLANVAKNVAWLSASATRAGFHNSFAIRENLADVTAKAGSQGIASSIFGTGLGILISQWTGAHTLNVVAAFSVLSAVHMISTYKSVDCVQLRTLNCQRLHIIATHFLKPSSEAREIPSMKTVSEREVFIPTMLTGYQTLHDKSVI------------HEDATLDQLSQDNPDILGRLKDFYGVEKYLLNLT-LMERGAHRIDLALEENATPQDALCAHLHAVLIQ 436          
BLAST of NO18G01080 vs. NCBI_GenBank
Match: ETK92910.1 (hypothetical protein L915_03831 [Phytophthora parasitica] >ETP22885.1 hypothetical protein F441_03920 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 251.1 bits (640), Expect = 8.100e-63
Identity = 153/340 (45.00%), Postives = 212/340 (62.35%), Query Frame = 0
Query:  128 LPRGYPRSVQKGYAEYVKLQMTASLASSAIGVLSTQSLLYAMGLGAGAIPLAAALNWIIKDGIGQVGGIIFASVVNDRFDANPKRWKMVATISLDLSCALELLAPLAPGSFLAIASLANVGKNVCFLSASASRAAIHNSFAKRENLADITAKAGSQFIVTSILGTGLGIALSTALGSSWMALAPICAGLSFVHISCNYLSLRHVCLNTINAERMELIMQHYVLTG----RIPAPGDISPIERFMTPAI--YDTVAPSALVARLPSLRMGRHLDEVASLEQLP--------RLARLFEKEKYVLNAKGRRGDGTATVDVLMKEEANVHDVLKACVHSYYVR 454
            LP+    SV K Y  Y K     S+AS A GVLS QSLLYA+GLGAGAIP AAA+NW++KDG+GQ GG++FAS+VN+R+DA+PKRW++ ++I+LD++   E+L PLAPGSFLAIASLANV KNV +LSASA+RA  HNSFA RENLAD+TAKAGSQ I +SI GTGLGI +S   G+  + +    + LS  H++  Y S+  V L T+N +R+ +I  H++        IP+   +S  E F+   +  Y T+   +++             E A+L+QL         RL   +  EKY+LN       G   +D+ ++E A   D L A +H+  ++
Sbjct:  110 LPKDAHTSVTKDYFPYAKWSFVGSIASCAAGVLSMQSLLYAVGLGAGAIPTAAAVNWVLKDGLGQFGGVLFASIVNNRYDADPKRWRIASSIALDIAVLGEILTPLAPGSFLAIASLANVAKNVAWLSASATRAGFHNSFAIRENLADVTAKAGSQGIASSIFGTGLGILISQWTGAHTLNVVAAFSVLSAAHMTSTYKSVDCVQLRTLNCQRLHIIATHFLKPSSEAREIPSMKTVSEREVFIPTMLTGYQTLHDKSVI------------HEDATLDQLSQDNPDILGRLKDFYGVEKYLLNLT-LMERGAHRIDLALEENATPQDALCAHLHAVLIQ 436          
BLAST of NO18G01080 vs. NCBI_GenBank
Match: ETP50863.1 (hypothetical protein F442_03927 [Phytophthora parasitica P10297])

HSP 1 Score: 251.1 bits (640), Expect = 8.100e-63
Identity = 153/340 (45.00%), Postives = 212/340 (62.35%), Query Frame = 0
Query:  128 LPRGYPRSVQKGYAEYVKLQMTASLASSAIGVLSTQSLLYAMGLGAGAIPLAAALNWIIKDGIGQVGGIIFASVVNDRFDANPKRWKMVATISLDLSCALELLAPLAPGSFLAIASLANVGKNVCFLSASASRAAIHNSFAKRENLADITAKAGSQFIVTSILGTGLGIALSTALGSSWMALAPICAGLSFVHISCNYLSLRHVCLNTINAERMELIMQHYVLTG----RIPAPGDISPIERFMTPAI--YDTVAPSALVARLPSLRMGRHLDEVASLEQLP--------RLARLFEKEKYVLNAKGRRGDGTATVDVLMKEEANVHDVLKACVHSYYVR 454
            LP+    SV K Y  Y K     S+AS A GVLS QSLLYA+GLGAGAIP AAA+NW++KDG+GQ GG++FAS+VN+R+DA+PKRW++ ++I+LD++   E+L PLAPGSFLAIASLANV KNV +LSASA+RA  HNSFA RENLAD+TAKAGSQ I +SI GTGLGI +S   G+  + +    + LS  H++  Y S+  V L T+N +R+ +I  H++        IP+   +S  E F+   +  Y T+   +++             E A+L+QL         RL   +  EKY+LN       G   +D+ ++E A   D L A +H+  ++
Sbjct:  110 LPKDAHTSVTKDYFPYAKWSFVGSIASCAAGVLSMQSLLYAVGLGAGAIPTAAAVNWVLKDGLGQFGGVLFASIVNNRYDADPKRWRIASSIALDIAVLGEILTPLAPGSFLAIASLANVAKNVAWLSASATRAGFHNSFAIRENLADVTAKAGSQGIASSIFGTGLGILISQWTGAHTLNVVAAFSVLSAAHMTSTYKSVDCVQLRTLNCQRLHIIATHFLKPSSEAREIPSMKTVSEREVFIPTMLTGYQTLHDKSVI------------HEDATLDQLSQDNPDILGRLKDFYGVEKYLLNLT-LMERGAHRIDLALEENATPQDALCAHLHAVLIQ 436          
BLAST of NO18G01080 vs. NCBI_GenBank
Match: OQR84473.1 (hypothetical protein ACHHYP_13339 [Achlya hypogyna])

HSP 1 Score: 250.4 bits (638), Expect = 1.400e-62
Identity = 154/340 (45.29%), Postives = 212/340 (62.35%), Query Frame = 0
Query:  128 LPRGYPRSVQKGYAEYVKLQMTASLASSAIGVLSTQSLLYAMGLGAGAIPLAAALNWIIKDGIGQVGGIIFASVVNDRFDANPKRWKMVATISLDLSCALELLAPLAPGSFLAIASLANVGKNVCFLSASASRAAIHNSFAKRENLADITAKAGSQFIVTSIL--------------GTGLGIALSTALGSSWMALAPICAGLSFVHISCNYLSLRHVCLNTINAERMELIMQHYVLTGRIPAPGDISPIERFMTPAIYDTVAPSALVARLPSLRMGRHLDEVASLEQLPRLARLFEKEKYVLNAKGRRGDGTATVDVLMKEEANVHDVLKACVHSYYVR 454
            LPR Y  S  K Y  Y K Q   S+A +A GVLS QSLLYA+GL +GAIP+AAALNW+IKDG+GQ GG++FAS+VN RFD++PKRW++V+ +++D +   E+L PL P  FL +A++ANV KN+ +LSASA+RA  H SFAK ENLADITAKAGSQ I +SIL              GT LGIA+S  +G++   +A     LS +++   Y SL  V L T+N +R+  I+ +Y+ TG +P P  +S  ERF++    + ++  A      SL +   LD V +    PR    F  EKY+L+  G      +TV +LM+E A   DVL A +H+  V+
Sbjct:   75 LPRDYQTSTTKDYLPYAKWQFVGSVAGTACGVLSMQSLLYAIGLQSGAIPMAAALNWVIKDGLGQFGGVLFASLVNHRFDSDPKRWRIVSALAMDAATLTEILTPLCPAYFLPMAAMANVAKNISWLSASATRAGFHYSFAKTENLADITAKAGSQSIASSILGGGAAHGAQFTAAVGTALGIAISPIIGTATSHVAGAFFVLSGINLWSQYNSLCVVSLRTLNQQRLNHILDNYIATGDVPTPETVSAKERFVS----NLLSGKACHLTKSSLSLTSRLDTVYT-PSTPR----FPGEKYLLHVTG------STVHLLMEESATSADVLAAHLHTRLVQ 399          
The following BLAST results are available for this feature:
BLAST of NO18G01080 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM23329.11.700e-18276.40uncharacterized protein Naga_100053g25 [Nannochlor... [more]
CBN75993.11.400e-6738.57conserved unknown protein [Ectocarpus siliculosus][more]
KUF91713.11.200e-6343.15hypothetical protein AM588_10004546 [Phytophthora ... [more]
ETI53067.13.600e-6345.29hypothetical protein F443_03939 [Phytophthora para... [more]
ETM52635.13.600e-6345.29hypothetical protein L914_03791 [Phytophthora para... [more]
ETL46337.14.700e-6345.00hypothetical protein L916_03772 [Phytophthora para... [more]
XP_008901149.16.200e-6345.29hypothetical protein PPTG_08002 [Phytophthora para... [more]
ETK92910.18.100e-6345.00hypothetical protein L915_03831 [Phytophthora para... [more]
ETP50863.18.100e-6345.00hypothetical protein F442_03927 [Phytophthora para... [more]
OQR84473.11.400e-6245.29hypothetical protein ACHHYP_13339 [Achlya hypogyna... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL008nonsL008Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR064ncniR064Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR043ngnoR043Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003963NSK003963Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO18G01080.1NO18G01080.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|533736gene_9535Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100053g25gene7132Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO18G01080.1NO18G01080.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO18G01080 ID=NO18G01080|Name=NO18G01080|organism=Nannochloropsis oceanica|type=gene|length=2029bp
ATGCTGGGAGGAACGCGGCTGCGGCGTCTAGCCCTGCAGCACAGCAGTCC
GTGTCGCAGGCCACATCTTTTGCCAGCACCCCCACCTCTCCTTCGCCTCC
CGCATCGTTTGGCTGCCTCCTCGTCCACCCCACCCACTCCCCCTTCCTCC
ACCGACAAGCTTGTGGCCAAGCAAATCATGACAGACCGGGCAGGCTACCG
TGAGACGCTGTACTATGCGGCCGTGCCCTCGTCTTCGATGGCCGAGAAAT
CCAAAGACAAGGAAACGGAGGAGAGCACCACCACTAGCAGCACCACAAAT
AGCAAGGCATATCACCGTATCGACCCTCCCCCCGAAGTCCTTTCCCTCCG
CCTTCTGGCCGAAGACGGCCTCCGCGCCTTGCTTCCAAGAGGCTACCCAC
GCTCGGTCCAAAAAGGGTACGCAGAATATGTCAAACTTCAAATGACAGCT
TCCCTGGCCAGCTCCGCCATTGGTGTGCTCTCCACTCAATCCCTCCTCTA
CGCCATGGGCCTGGGCGCCGGCGCCATCCCCCTCGCCGCGGCCCTTAACT
GGATCATAAAAGACGGGATCGGACAAGTCGGCGGCATCATATTCGCCAGT
GTCGTGAACGACCGATTCGACGCGAATCCCAAACGCTGGAAAATGGTCGC
CACGATTTCCCTTGACCTCTCCTGCGCACTCGAGCTCCTTGCGCCTCTCG
CCCCAGGGTCCTTCCTCGCCATCGCCTCCCTCGCCAACGTCGGCAAAAAC
GTATGTTTCCTCTCCGCCTCCGCCTCGCGCGCGGCCATCCACAACTCCTT
CGCCAAACGGGAGAATCTCGCCGACATCACCGCAAAAGCTGGTTCTCAAT
TCATAGTCACTTCAATCCTCGGCACTGGTCTGGGTATCGCCCTCTCCACC
GCACTAGGCTCTTCCTGGATGGCGCTCGCTCCCATCTGTGCAGGGCTGTC
TTTTGTCCACATTTCTTGTAACTACCTATCCCTACGCCACGTTTGCCTCA
ACACAATCAACGCCGAGAGGATGGAGTTGATCATGCAGCACTACGTCCTC
ACAGGCCGCATCCCCGCCCCGGGCGACATATCTCCAATCGAACGGTTTAT
GACCCCCGCCATCTATGACACAGTGGCCCCTTCCGCATTAGTGGCGCGCT
TGCCTTCCTTGAGGATGGGGAGGCACTTAGACGAGGTGGCAAGCCTTGAG
CAGCTGCCAAGGTTGGCCCGGTTGTTCGAAAAGGAGAAATATGTTTTGAA
TGCGAAGGGAAGGAGGGGGGATGGGACGGCGACCGTTGATGTGTTGATGA
AGGAAGAGGCAAATGTCCACGACGTGTTGAAGGCGTGCGTGCATTCGTAC
TACGTCAGAAAGGAGGCAGGGAGGGAGGGAGGGTGGAAGGCCCCTCGGGT
GCAGTCGGCGTGGGCGAGGTTGATGGAGAAGAAGGAGGTGGAACGGTCAG
ATACGTGGCTCATTGACCTCGTGGAAAGCACGCATAAAACATTGTACCGA
CCATCGTCGGGGGCTGGAGGGGCAAGGGAGGGAGGGAGGGAGGATGGGAG
GGGGAAGCATTTGACTATGGTGGATGATATTGTGGGGCAGTTGACGCGGG
CTGGGTGGTTGACGGACAGTGTGTTTTTCCCACATACCCAAAATAGGATT
AGCTTTGAAGGGGGCGCGATTCAAGGAGTGCCCTTGTCGTCATCTGACAG
CAATAAAAAGGGAGCATGAAGGTGTAAGAATGTCGGATAGTGGGGCAGTG
GACGGGTAGTGGTAGTGTCGTGTTGTCTGCAATCACCTTCGGGTTCGACG
GGGCCTCCATCTCGATGTCGATTTAAGAGAAGGGTGAGGGGGAAGAAAGC
ACAAGCCACTCAAGTGTGTCAATAGGTCGATAAAGGAATGTGTAAAAGTA
GACGGAGGTGGCGAGAGTCGTCGAGCACAAGCGCACGCATGGCGCATCTG
GACACGAGGCAATAAACGCATCTTTAAAAAGATTAGCATCAATAGGCGAC
AGATTCCCAAAATCCATTTCACTTTGTAT
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protein sequence of NO18G01080.1

>NO18G01080.1-protein ID=NO18G01080.1-protein|Name=NO18G01080.1|organism=Nannochloropsis oceanica|type=polypeptide|length=573bp
MLGGTRLRRLALQHSSPCRRPHLLPAPPPLLRLPHRLAASSSTPPTPPSS
TDKLVAKQIMTDRAGYRETLYYAAVPSSSMAEKSKDKETEESTTTSSTTN
SKAYHRIDPPPEVLSLRLLAEDGLRALLPRGYPRSVQKGYAEYVKLQMTA
SLASSAIGVLSTQSLLYAMGLGAGAIPLAAALNWIIKDGIGQVGGIIFAS
VVNDRFDANPKRWKMVATISLDLSCALELLAPLAPGSFLAIASLANVGKN
VCFLSASASRAAIHNSFAKRENLADITAKAGSQFIVTSILGTGLGIALST
ALGSSWMALAPICAGLSFVHISCNYLSLRHVCLNTINAERMELIMQHYVL
TGRIPAPGDISPIERFMTPAIYDTVAPSALVARLPSLRMGRHLDEVASLE
QLPRLARLFEKEKYVLNAKGRRGDGTATVDVLMKEEANVHDVLKACVHSY
YVRKEAGREGGWKAPRVQSAWARLMEKKEVERSDTWLIDLVESTHKTLYR
PSSGAGGAREGGREDGRGKHLTMVDDIVGQLTRAGWLTDSVFFPHTQNRI
SFEGGAIQGVPLSSSDSNKKGA*
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Synonyms
Publications