NO18G01040, NO18G01040 (gene) Nannochloropsis oceanica

Overview
NameNO18G01040
Unique NameNO18G01040
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2576
Alignment locationchr18:368317..370892 -

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Properties
Property NameValue
DescriptionMethylcrotonoyl-carboxylase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr18genomechr18:368317..370892 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
GO:0005524ATP binding
GO:0000166nucleotide binding
Vocabulary: INTERPRO
TermDefinition
IPR011053Single_hybrid_motif
IPR011054Rudment_hybrid_motif
IPR016185PreATP-grasp_dom
IPR011761ATP-grasp
IPR011764Biotin_carboxylation_dom
IPR005479CbamoylP_synth_lsu-like_ATP-bd
IPR000089Biotin_lipoyl
IPR005481CarbamoylP_synth_lsu_N
IPR005482Biotin_COase_C
Homology
BLAST of NO18G01040 vs. NCBI_GenBank
Match: EWM23339.1 (methylcrotonoyl- carboxylase [Nannochloropsis gaditana])

HSP 1 Score: 907.9 bits (2345), Expect = 1.900e-260
Identity = 485/720 (67.36%), Postives = 549/720 (76.25%), Query Frame = 0
Query:   27 SSAAAAVRAIPALETSTIIKKLLIANRGEIACRIIRTARKMGIKTVAVYSDADARAQFVQMADEAHWIGPSPTRESYLVKEKILAVAQRAGAQALHPGYGFLSENPDFAEMCQAAGVLFVGPSVSALRAMGSKAAAKQIMTDAGVPVTPSYYGEDQDDARLVAEAEK--------------------------------------------------------------VFGDSHGNAVHLYERDCSVQRRHQKVLEESPAPGLDRGMREEMGRAAVLAAKAVGYTGAGTVEFLVDPVTEAFYFCEMNTRLQVEHCVTEMVTGVDLVEWQLRVAAGEPLPVVKQEEIMTKGHAIEARIYAENPAKGFLPATGFLKRLRTPKAEEGGVRVETGVVEGDEVSMFYDPMIAKLLTWAPTRGEALRKMKGALQEYQIAGLPNNLEFLERCVGHPAFARGAVTTGFLVEHERDVSIPPPSPPSNHLVALAAHALVEGREGGTRGGSPWVGGAWRGLSGERSLPLTMVMEGLEEVPLVLRVNVSPPNEEKREEG----VVVSVKTPDGEVHRVVGRHGKNXXXXXXXXXXXXEATIDGSVTYKYHAWIKDGGPRDGAAIQLWLRSGGLVDDPLSRLAFSLSVPAIALGKESGGSIHPKVIAPMPGKVVKVLVKDGEEVKKGQALMILEAMKMEHVIAAPRDATVEAVARGVGDVVQEGVALISLQA 681
            S++A  V   P   +S    KLLIANRGEIACRIIRTARKMGIKTVAVYSDADAR+QFV+MADEAHWIGPSPT ESYLVKEKIL VA+RAG QALHPGYGFLSENPDFAEMCQ+AGV+FVGP V ALR+MGSKAAAK+IMT+AGVPVTP+YYGE+QDDARL+AEAEK                                                              VFGD HGNAVHL+ERDCSVQRRHQKVLEESPAPGL   +REEMGRAAVLAAKAVGYTGAGTVEFL+DP ++ FYFCEMNTRLQVEHCVTEMVTGVDLVEWQLRVAAGEPLPV +Q +I  +GHAIEARIYAENPAKGFLPATG LKRLRTP +EEG VRVETGVVEGDEVSM+YDPMIAKLLTWAP+R EALR+M   L++YQIAGLPNNLEFLERCVGHPAF RG VTTGFLVE+E DVSIPPPSPPS HL+ALAA+AL + RE   RG +PW+GGAWRG+ G R LP+  V++GLEE    L+  V     ++   G      + V+ PDG+ +RV G   +             EAT++G VTYKY AWI+DGG R GA +QLWLRSGGLVDDPL R  FSL VPA ALG E  G + P+++APMPGK+VKVLVK GE V+KGQ+L+ILEAMKMEHVI AP+DATV++VAR VGDVVQEG+ L+SL+A
Sbjct:   33 STSATPVEGSP--PSSKPFTKLLIANRGEIACRIIRTARKMGIKTVAVYSDADARSQFVRMADEAHWIGPSPTTESYLVKEKILEVAKRAGVQALHPGYGFLSENPDFAEMCQSAGVVFVGPPVPALRSMGSKAAAKRIMTEAGVPVTPAYYGEEQDDARLLAEAEKVGYPVMIKAVTGGGGKGMRRVMAAADFLPALEACRREALKSFGRDRMLIEKYLVDPRHIELQVFGDRHGNAVHLHERDCSVQRRHQKVLEESPAPGLGEALREEMGRAAVLAAKAVGYTGAGTVEFLLDPASQRFYFCEMNTRLQVEHCVTEMVTGVDLVEWQLRVAAGEPLPVREQADIRARGHAIEARIYAENPAKGFLPATGSLKRLRTPVSEEGAVRVETGVVEGDEVSMYYDPMIAKLLTWAPSRPEALRRMARGLRDYQIAGLPNNLEFLERCVGHPAFERGGVTTGFLVEYEADVSIPPPSPPSPHLLALAAYALTQQRE-APRGSTPWLGGAWRGV-GRRRLPVEFVVDGLEE-SFALKAGVMDGGVQEGGGGGRHAWGLRVEMPDGQAYRVSGSRCEG-ERASGAHGDEWEATVEG-VTYKYSAWIEDGGMRGGARVQLWLRSGGLVDDPLQRTTFSLRVPAAALGHELAGGVMPRILAPMPGKLVKVLVKAGEAVRKGQSLLILEAMKMEHVITAPQDATVDSVARAVGDVVQEGIPLVSLKA 745          
BLAST of NO18G01040 vs. NCBI_GenBank
Match: WP_028445040.1 (acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha [Chitinimonas koreensis])

HSP 1 Score: 522.3 bits (1344), Expect = 2.200e-144
Identity = 322/676 (47.63%), Postives = 397/676 (58.73%), Query Frame = 0
Query:   44 IIKKLLIANRGEIACRIIRTARKMGIKTVAVYSDADARAQFVQMADEAHWIGPSPTRESYLVKEKILAVAQRAGAQALHPGYGFLSENPDFAEMCQAAGVLFVGPSVSALRAMGSKAAAKQIMTDAGVPVTPSYYGEDQDDARLVAEAEK--------------------------------------------------------------VFGDSHGNAVHLYERDCSVQRRHQKVLEESPAPGLDRGMREEMGRAAVLAAKAVGYTGAGTVEFLVDPVTEAFYFCEMNTRLQVEHCVTEMVTGVDLVEWQLRVAAGEPLPVVKQEEIMTKGHAIEARIYAENPAKGFLPATGFLKRLRTPKAEEGGVRVETGVVEGDEVSMFYDPMIAKLLTWAPTRGEALRKMKGALQEYQIAGLPNNLEFLERCVGHPAFARGAVTTGFLVEHERDVSIPPPSPPSNHLVALAA---HALVEGREGGTR-----GGSP-WVGGAWRGLSGERSLPLTMVMEGLEEVPLVLRVNVSPPNEEKREEGVVVSVKTPDGEVHRVVGRHGKNXXXXXXXXXXXXEATIDGSVTYKYHAWIKDGGPRDGAAIQLWLRSGGLVDDPLSRLAFSLSVPAIALGKESGGSIHPKVIAPMPGKVVKVLVKDGEEVKKGQALMILEAMKMEH 649
            + KK+LIANRGEIACR+I+TAR++GIKTVAVYSDADA A+ V++ADEA  +GP+  RESYL  E IL +A+R+GA+A+HPGYGFLSEN  FAE C AAGV F+GP  SA+ AMGSK+AAK +M  AGVP+ P Y+G++QD A L  +A++                                                              VFGDSHG+AV+L+ERDCSVQRRHQKVLEE+PAPGL   +R E+G AAV AA+AVGY GAGTVEF+ D +T+AFYF EMNTRLQVEH VTEMVTG+DLVEWQLRVAAGEPLP+  Q+ +  +GHA EAR+YAE+PA+ FLP  G L  LR P AE   VRV+TGV  GDE+S FYDPMIAKL+ W   R  AL ++  AL EY++ GL  NL+FL R  GHPAF    + TGF+  H RD  IPPP+P     +ALAA    AL+E R    R       SP W    WR     R      V E    V               R++G ++ +    GE  R+  R                 AT+DG   Y+  A    G  RDG  + L    G +  +P + L   L+        ESGG +     APMPG VV V V  G+ V+KG  L+ILEAMKMEH
Sbjct:    1 MFKKILIANRGEIACRVIKTARQLGIKTVAVYSDADADARHVKLADEAFRLGPAAPRESYLKAELILELARRSGAEAVHPGYGFLSENEAFAEACAAAGVAFIGPPASAIAAMGSKSAAKTLMEGAGVPLVPGYHGDEQDTAFLQQQADRIGYPVLIKASAGGGGKGMKIVETAADFAGQLASAKREAAASFGDDKVLIEKYLTRPRHVEIQVFGDSHGDAVYLFERDCSVQRRHQKVLEEAPAPGLSAELRREIGEAAVRAARAVGYVGAGTVEFIFDTLTDAFYFMEMNTRLQVEHPVTEMVTGLDLVEWQLRVAAGEPLPLA-QDALRIRGHAFEARVYAEDPARDFLPQIGRLAHLRQP-AESAHVRVDTGVESGDEISPFYDPMIAKLIVWDENRDRALDRLASALAEYEVVGLDTNLDFLRRLAGHPAFRAQELDTGFIARH-RDALIPPPAPVDAETLALAALAELALLEARGEAARLRSADAASPWWQTDGWRLNQDNRHALHFRVGEAEHAVV-----------AHYRDDGYLLEI----GEA-RIEAR--------GSLRDGRLSATLDG---YRLAA----GVVRDGGTLTLVRDGGNVALEPFNPLLAGLA------AAESGGGL----TAPMPGTVVAVHVAPGDTVEKGAPLVILEAMKMEH 632          
BLAST of NO18G01040 vs. NCBI_GenBank
Match: WP_067559679.1 (acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha [Oceanibaculum pacificum] >KZD01551.1 3-methylcrotonyl-CoA carboxylase [Oceanibaculum pacificum])

HSP 1 Score: 517.3 bits (1331), Expect = 7.200e-143
Identity = 316/708 (44.63%), Postives = 409/708 (57.77%), Query Frame = 0
Query:   45 IKKLLIANRGEIACRIIRTARKMGIKTVAVYSDADARAQFVQMADEAHWIGPSPTRESYLVKEKILAVAQRAGAQALHPGYGFLSENPDFAEMCQAAGVLFVGPSVSALRAMGSKAAAKQIMTDAGVPVTPSYYGEDQDDARLVAEAEK--------------------------------------------------------------VFGDSHGNAVHLYERDCSVQRRHQKVLEESPAPGLDRGMREEMGRAAVLAAKAVGYTGAGTVEFLVDPVTEAFYFCEMNTRLQVEHCVTEMVTGVDLVEWQLRVAAGEPLPVVKQEEIMTKGHAIEARIYAENPAKGFLPATGFLKRLRTPKAEEGGVRVETGVVEGDEVSMFYDPMIAKLLTWAPTRGEALRKMKGALQEYQIAGLPNNLEFLERCVGHPAFARGAVTTGFLVEHERDVSIPPPSPPSNHLVALAAHALVEGR-----EGGTRGGSPWVGGAWRGLSGERSLPLTMVMEGLEEVPLVLRVNVSPPNEEKREEGVVVSVKTPDGEVHRVVGRHGKNXXXXXXXXXXXXEATIDGSVTYKYHAWIKDGGP------RDGAAIQLWLRSGGLVDDPLSRLAFSLSVPAIALGKESGGSIHPKVIAPMPGKVVKVLVKDGEEVKKGQALMILEAMKMEHVIAAPRDATVEAVARGVGDVVQEGVALISLQ 680
            I  LLIANRGEIACR+ RTAR+MGI+T+AVYSDADA +  V   DEA  IGP+P R+SYL ++ IL VA++AGA A+HPGYGFLSEN  FA+ C AAG+LFVGP   A+ AMGSK+AAKQ+M  AGVP+ P Y+GEDQD A L  +A +                                                              VF DSHGN V L+ERDCSVQRRHQKV+EE+PAPG+    R EMG AAV AAKA+GY GAGTVEF+VD   + F+F EMNTRLQVEH VTEM+TG+DLVEWQLRVAAGE LP ++QE++   GHA E R+YAE+PA+ F+P TG L  LR P AE   VR++TGV EGD VS+ YDPMIAKL+   P R  AL +++ AL+  ++AG   N++FL    GHPAFA G V TGF+ EHE ++ +P   P  +  +ALAA A +  R     E     G P     W  ++G R                         N+E        +++  DGE  R V  H +             +AT+    +      + DG        RDG  + ++   GGL    L+ +   L+  A+A G+ +      +  APMPGK+V+VL++ G  V+KG AL+++EAMKMEH IAAP D TV  +   VGD+V++G  L+S +
Sbjct:    3 IGTLLIANRGEIACRVARTARRMGIRTIAVYSDADAGSLHVASCDEAWPIGPAPARDSYLRRDAILDVARKAGADAIHPGYGFLSENAAFAKACAAAGILFVGPPAGAIEAMGSKSAAKQLMEKAGVPLVPGYHGEDQDAAFLEHQANRIGYPVLIKASAGGGGKGMKVVEKPVDFAGQLASAKREAAASFGDEQVLIEKYLIRPRHIEIQVFADSHGNCVSLFERDCSVQRRHQKVIEEAPAPGMTEERRREMGAAAVAAAKAIGYVGAGTVEFIVDAGGD-FFFMEMNTRLQVEHPVTEMITGLDLVEWQLRVAAGEALP-LRQEQLAIGGHAFEVRLYAEDPARDFVPQTGRLAALRFP-AESASVRIDTGVREGDTVSVHYDPMIAKLIVHGPDRAAALARLRQALRGTKVAGFTTNIDFLAALAGHPAFAAGEVHTGFIAEHEAEL-LPAERPAEDTHLALAALAFMADRQRAACEAAALSGDP--SSPWHAVTGWRL------------------------NDESHH-----TLRFKDGEAEREVTVHFRREGYRLDLPGGSRDATVAAGSSGDMIVTL-DGVRSAATVIRDGLELTVF-PGGGLPSRRLALIDPLLAAEAMAEGQGA------RFTAPMPGKIVQVLIEAGASVEKGAALIVMEAMKMEHTIAAPADGTVSEIHYQVGDLVEDGAELLSFE 667          
BLAST of NO18G01040 vs. NCBI_GenBank
Match: WP_020657056.1 (acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha [Massilia niastensis])

HSP 1 Score: 516.2 bits (1328), Expect = 1.600e-142
Identity = 322/715 (45.03%), Postives = 413/715 (57.76%), Query Frame = 0
Query:   44 IIKKLLIANRGEIACRIIRTARKMGIKTVAVYSDADARAQFVQMADEAHWIGPSPTRESYLVKEKILAVAQRAGAQALHPGYGFLSENPDFAEMCQAAGVLFVGPSVSALRAMGSKAAAKQIMTDAGVPVTPSYYGEDQD--------DA------------------RLVAEAE------------------------------------KVFGDSHGNAVHLYERDCSVQRRHQKVLEESPAPGLDRGMREEMGRAAVLAAKAVGYTGAGTVEFLVDPVTEAFYFCEMNTRLQVEHCVTEMVTGVDLVEWQLRVAAGEPLPVVKQEEIMTKGHAIEARIYAENPAKGFLPATGFLKRLRTP------------KAEEGGVRVETGVVEGDEVSMFYDPMIAKLLTWAPTRGEALRKMKGALQEYQIAGLPNNLEFLERCVGHPAFARGAVTTGFLVEHERDVSIPPPSPPSNHLVALAAHALVEGREGGTRGGSPWVG-GAWRGLSGERSLPLTMVMEGLEEVPLVLRVNVSPPNEEKREEGVVVSVKTPDGEVHRVVGRHGKNXXXXXXXXXXXXEATIDGSVTYKYHAWIKDGGPRDGAAIQLWLRSGGLV---DDPLSRLAFSLSVPAIALGKESGGSIHPKVIAPMPGKVVKVLVKDGEEVKKGQALMILEAMKMEHVIAAPRDATVEAVARGVGDVVQEGVALISLQA 681
            + +K+LIANRGEIACR+  TAR++GIKTVAVYSDADA A+ V + DEA  IGP+P++ESYL  EKI+  A   GAQA+HPGYGFLSEN +FA+ C  AG++F+GP  SA+RAMGSK+AAK +M  A VP+ P Y+GE+QD        DA                  R+V  +E                                    +VF D+HGN V+LYERDCSVQRRHQKVLEE+PAPG+    R  MG+AAV AA+AVGY GAGTVEF+ +    +FYF EMNTRLQVEH VTEM+TG DLVEWQLRVAAGEPLP ++Q+E+   GHA+EARIYAENP KGFLP+ G ++RLRTP             A+   VR+++GV EGD +S FYDPMIAKL+ W   R EAL +M  AL EYQ+ GL  N+ FL+R V    ++R  + TG L+E  RD   PP    +   +ALAA AL++G EG   GG PW G G WR ++G     L    E   +   V+ +         +  G   SV         +VGR                +A + G+V             R+G  + ++     +     DPL+         A  L  E G     ++ APMPGK+V +L + G  V+KG  L+I+EAMKMEH IAAP   TVE +   VGD V EGV L++ +A
Sbjct:    1 MFQKILIANRGEIACRVAATARRLGIKTVAVYSDADAGAKHVAVCDEALAIGPAPSKESYLRYEKIIQAALATGAQAIHPGYGFLSENEEFADSCARAGLVFIGPPASAIRAMGSKSAAKALMESADVPLVPGYHGENQDADFLRGQADAIGYPVLLKASAGGGGKGMRIVERSEDFEAALKSCKREAINSFGDDRVLVEKYLIRPRHIEIQVFADTHGNCVYLYERDCSVQRRHQKVLEEAPAPGMSETRRRSMGQAAVAAARAVGYVGAGTVEFIANQ-DGSFYFMEMNTRLQVEHPVTEMITGTDLVEWQLRVAAGEPLP-LRQDELSIHGHALEARIYAENPEKGFLPSIGTVRRLRTPAAAHFEPGAGAGAADPAAVRIDSGVREGDAISPFYDPMIAKLIVWGRDRDEALARMSQALAEYQLVGLATNVAFLKRLVESAPYSRADLDTG-LIERHRDALFPPAQATALPALALAAAALLDG-EGHPGGGDPWAGTGGWR-MNGTLVRRLAFSDEAGSQ---VVELGYQRQGWSLQAGGQRASV--------ALVGREDTQ------FTLRLDDAVVRGNVV------------REGETVHVFTGGRHVTLHHGDPLAH--------AGELEAEGG-----RLTAPMPGKIVALLTEKGAVVEKGAPLLIMEAMKMEHTIAAPAGGTVEELLYAVGDQVSEGVQLLAFKA 668          
BLAST of NO18G01040 vs. NCBI_GenBank
Match: XP_004343939.1 (acetylCoA carboxylase, biotin carboxylase subunit, putative [Acanthamoeba castellanii str. Neff] >ELR20536.1 acetylCoA carboxylase, biotin carboxylase subunit, putative [Acanthamoeba castellanii str. Neff])

HSP 1 Score: 515.0 bits (1325), Expect = 3.600e-142
Identity = 321/729 (44.03%), Postives = 434/729 (59.53%), Query Frame = 0
Query:   28 SAAAAVRAIPAL-ETSTIIKKLLIANRGEIACRIIRTARKMGIKTVAVYSDADARAQFVQMADEAHWIGPSPTRESYLVKEKILAVAQRAGAQALHPGYGFLSENPDFAEMCQAAGVLFVGPSVSALRAMGSKAAAKQIMTDAGVPVTPSYYGEDQDDARLVAEAEK--------------------------------------------------------------VFGDSHGNAVHLYERDCSVQRRHQKVLEESPAPGLDRGMREEMGRAAVLAAKAVGYTGAGTVEFLVDPVTEAFYFCEMNTRLQVEHCVTEMVTGVDLVEWQLRVAAGEPLPVVKQEEIMTKGHAIEARIYAENPAKGFLPATGFLKRLRTPKAEEGGVRVETGVVEGDEVSMFYDPMIAKLLTWAPTRGEALRKMKGALQEYQIAGLPNNLEFLERCVGHPAFARGAVTTGFLVEHERDVSIPPPSPPSNHLVALAAHALVEGREGG----TRGGSPWVGGAWRGLSGERSLPLTMVMEGLEEVPLVLRVNVSPPNEEKREEGVVVSVKTPDGEV----HRVVGRHGKNXXXXXXXXXXXXEATIDGSV--TYKYHAWIKDGGPRDGAAIQ----LWLRSGGLVDDPLSRLAFSLSVPAIALGKESGGSIHPKVIAPMPGKVVKVLVKDGEEVKKGQALMILEAMKMEHVIAAPRDATVEAVARGVGDVVQEGVALISLQ 680
            S+ AA  + P L +   +  K+LIANRGEIACR++RT +++G+KTVAVYS+ADA++  V MADEA+ IGP P +ESYL  + I+ VA++AGAQA+HPGYGFLSEN  FA + + +G++F+GP  SA+ +MGSK+ +K+IM++A VP+ P Y+GE QD   L+AEAEK                                                              VF D +GN VHL+ERDCSVQRRHQK++EE+PAPG+   +R  MG AAV AAKAVGY GAGTVEF++D  T+ FYF EMNTRLQVEH ++EM+TG DLVEWQL+VA+G+ LP+  Q+++   GHA EARIYAENP KGFLP TG L  L TP+     VR+ETGV +GD+VS+FYDPMIAKL+ W   R  ALR++  +L  YQ+ GL  N+EFL +   HP+F  G V TGF +EH R+   P  S PS  ++ALAA +++              S    GAW  L G R     +  E   E+  V +V      EE+  E  V++   PD  V     +VV +  +     XXXXXX  E T+ G V  T +  A + D    DG  ++    L +   G+  +    LA    + A   G++ G      + +PMPGK+VK+ V+ GEEVKKGQ L+++EAMKMEH I +P D  V++V   V   V++ VAL+ ++
Sbjct:   47 SSRAAYSSRPGLGKDGRMFDKVLIANRGEIACRVMRTCKRLGVKTVAVYSEADAKSMHVAMADEAYLIGPPPAKESYLKGDYIIEVAKKAGAQAIHPGYGFLSENSRFANLVEQSGLVFIGPPASAINSMGSKSESKKIMSNAAVPIIPGYHGEKQDVDYLMAEAEKIQYPVLIKAVMGGGGKGMRIVETKEDFVEALLSAKREAMSSFGDENVLVEKYITKPRHIEFQVFADKYGNVVHLFERDCSVQRRHQKIIEEAPAPGMTEELRARMGEAAVNAAKAVGYVGAGTVEFIMDSTTKGFYFMEMNTRLQVEHPISEMITGQDLVEWQLKVASGQHLPLT-QDQLKINGHAFEARIYAENPRKGFLPGTGKLVHLSTPE-PSSQVRIETGVRQGDQVSIFYDPMIAKLVVWDTDRTSALRRLNASLGHYQVVGLNTNIEFLGKLATHPSFIEGDVETGF-IEHHRNELFPAISAPSEKVLALAALSVLSEERAANLKEAERNSADAHGAW-SLPGWR-----LNEEQTRELRFVAQV-----GEEESAEFAVLATYRPDNTVSMKCKKVVAQ--EKGKKAXXXXXXSAEFTVTGQVGPTGEIKASVGDETITDGRVVRHKNTLNVFLKGVHHE--VNLALPKFLSAGTEGRKGG------LTSPMPGKIVKLFVQPGEEVKKGQPLIVMEAMKMEHTIRSPADGKVKSVGVSVDQFVEQNVALVQVE 751          
BLAST of NO18G01040 vs. NCBI_GenBank
Match: WP_103904145.1 (acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha [Chromobacterium sp. MWU14-2602] >POZ60517.1 3-methylcrotonyl-CoA carboxylase [Chromobacterium sp. MWU14-2602])

HSP 1 Score: 515.0 bits (1325), Expect = 3.600e-142
Identity = 315/699 (45.06%), Postives = 402/699 (57.51%), Query Frame = 0
Query:   44 IIKKLLIANRGEIACRIIRTARKMGIKTVAVYSDADARAQFVQMADEAHWIGPSPTRESYLVKEKILAVAQRAGAQALHPGYGFLSENPDFAEMCQAAGVLFVGPSVSALRAMGSKAAAKQIMTDAGVPVTPSYYGEDQDDARLVAEAE--------------------------------------------------------------KVFGDSHGNAVHLYERDCSVQRRHQKVLEESPAPGLDRGMREEMGRAAVLAAKAVGYTGAGTVEFLVDPVTEAFYFCEMNTRLQVEHCVTEMVTGVDLVEWQLRVAAGEPLPVVKQEEIMTKGHAIEARIYAENPAKGFLPATGFLKRLRTPKAEEGGVRVETGVVEGDEVSMFYDPMIAKLLTWAPTRGEALRKMKGALQEYQIAGLPNNLEFLERCVGHPAFARGAVTTGFLVEHERDVSIPPPSPPSNHLVALAAHALVEGREGGTRGGSPWVGGAWRGLSGERSLPLTMVMEGLEEVPLVLRVNVSPPNEEKREEGVVVSVKTPDGEVHRVVGRHGKNXXXXXXXXXXXXEATIDGSVTYKYHAWIKDGGPRDGAAIQLWLRSGGLVDDPLSRLAFSLSVPAIALGKESGGSIHPKVIAPMPGKVVKVLVKDGEEVKKGQALMILEAMKMEHVIAAPRDATVEAVARGVGDVVQEGVALISLQA 681
            +  K+LIANRGEIACR+I+TA+ +GI TVAVYSDADA A+FV++ADEA+ +GP+P  ESYL  ++ILA+AQ++GAQA+HPGYGFLSEN DFA  C+AAG+ F+GP  SA+ AMGSK+AAK +M  A VP+ P Y+G+DQD A L  +A+                                                              +VF D  G  V+L+ERDCSVQRRHQKVLEE+PAP L +  RE MG+AAV AA+AVGY GAGTVEF++D  +  FYF EMNTRLQVEH VTEM+TG DLV WQL VAAG  LP +KQ+++  +GHAIEARIYAE+P KGFLP+TG L  L TP  E   VR++TGV +GD +S FYDPMIAKL+ W  TR  ALR+M  AL +YQI GL +N+ FL R V HP+FA G V TG +  H  D+ +PPP+ PS   +AL A A    ++      +P+   A   L+G ++      ++  EE    LR          + +G VV V              G++             A +DGS        IK    R GA   L+  S         RLA     P         G  H K  APMPG+VV +L + G++V KG  L+ILEAMKMEH I AP D  V+      G+ V +G  L+   A
Sbjct:    1 MFNKILIANRGEIACRVIQTAKALGIATVAVYSDADANARFVKLADEAYRLGPAPAAESYLRADRILAIAQQSGAQAVHPGYGFLSENEDFAAACEAAGIAFIGPPASAIAAMGSKSAAKALMEKAAVPLVPGYHGDDQDPALLQKQADAIGYPVLIKASAGGGGKGMRIVEKSEDFSPALASCQREARASFGDDKVLVEKYLTKPRHVEIQVFADKLGGCVYLFERDCSVQRRHQKVLEEAPAPHLPQATREAMGQAAVAAARAVGYVGAGTVEFIMDVASGQFYFMEMNTRLQVEHPVTEMITGQDLVAWQLAVAAGGALP-LKQDQLAIRGHAIEARIYAEDPDKGFLPSTGALVHLATP-VESANVRIDTGVEQGDAISPFYDPMIAKLIVWGETREAALRQMDAALAQYQIVGLSSNVSFLRRIVNHPSFASGHVDTGLIARHHDDL-LPPPAAPSAKQLALLALAEALAQQ------APYPAAAGWRLNGGQTRRFAFRLDE-EEYSATLR---------HQADGFVVFV-------------DGQSLPARAQLQGSQLLAVLDGST-------IKATVARHGALRVLFENS--------ERLALEWVDPYAYTELGVHGETHLK--APMPGRVVALLAEIGKKVAKGSPLLILEAMKMEHTITAPGDGVVQDFYFAAGEQVNDGDELVDFAA 650          
BLAST of NO18G01040 vs. NCBI_GenBank
Match: WP_039744954.1 (acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha [Geobacter pickeringii] >AJE04711.1 3-methylcrotonyl-CoA carboxylase [Geobacter pickeringii])

HSP 1 Score: 514.2 bits (1323), Expect = 6.100e-142
Identity = 321/702 (45.73%), Postives = 403/702 (57.41%), Query Frame = 0
Query:   48 LLIANRGEIACRIIRTARKMGIKTVAVYSDADARAQFVQMADEAHWIGPSPTRESYLVKEKILAVAQRAGAQALHPGYGFLSENPDFAEMCQAAGVLFVGPSVSALRAMGSKAAAKQIMTDAGVPVTPSYYGEDQDDARLVAEAEK--------------------------------------------------------------VFGDSHGNAVHLYERDCSVQRRHQKVLEESPAPGLDRGMREEMGRAAVLAAKAVGYTGAGTVEFLVDPVTEAFYFCEMNTRLQVEHCVTEMVTGVDLVEWQLRVAAGEPLPVVKQEEIMTKGHAIEARIYAENPAKGFLPATGFLKRLRTPKAEEGGVRVETGVVEGDEVSMFYDPMIAKLLTWAPTRGEALRKMKGALQEYQIAGLPNNLEFLERCVGHPAFARGAVTTGFLVEHERDVSIPPPSPPSNHLVALAAHALV-----EGREGGTRGGSPWVGGAWRGLSGER----SLPLTMVMEGLEEVPLVLRVNVSPPNEEKREEGVVVSVKTPDGEVHRVVGRHGKNXXXXXXXXXXXXEATIDGSVTYKYHAWIKDGGPRDGAAIQLWLRSGGLVDDPLSRLAFSLSVPAIALGKESGGSIHPKVIAPMPGKVVKVLVKDGEEVKKGQALMILEAMKMEHVIAAPRDATVEAVARGVGDVVQEGVALISL 679
            +LIANRGEIACR+IRTAR++GI+TVAV+SDADA A  V MADEA+ IGP+P RESYL  E IL VA R+GAQA+HPGYGFLSEN +FAE C AAGV F+GP   A+RAMGSK+AAK IM  A VP+ P Y+GE+Q+   L  EAE+                                                              VF D+HGNAVHL+ERDCS+QRRHQKVLEE+PAPG+   +RE+MG AAV AA+A+GY GAGTVEFL+D    +FYF EMNTRLQVEH VTEM+TG DLVEWQL VAAG PLP + Q+E+   GHAIEARIYAE+PA+ FLP+ G L  LRTP  E   VR++TGV EG EVS++YDPMIAKL+ W   R  ALR+++ AL +YQ+ G+  N+ FL     HPAFA G + TGF+  H  D+  P P P S+  +ALA+  ++     E R        P     W   SG R    +      ++G   V + +           R EG ++ +  P G +  V G                 +AT+                 R GA + +  R              ++  P    G E G     ++ APMPGKVV V+V+ GE V+KG+ LMILEAMKMEH I APR   VE +   VG +V EGV L++L
Sbjct:    5 ILIANRGEIACRVIRTARRLGIRTVAVFSDADADALHVTMADEAYRIGPAPARESYLRGEAILEVAARSGAQAIHPGYGFLSENAEFAEACAAAGVAFIGPPTGAIRAMGSKSAAKAIMEKAAVPLVPGYHGENQEPEFLRREAERIGFPVLIKASAGGGGKGMRAVREGAEFPDALASARREARASFGDDRVLLEKYLTKPRHVEIQVFADTHGNAVHLFERDCSIQRRHQKVLEEAPAPGMKPALREKMGVAAVAAARAIGYVGAGTVEFLLDE-DGSFYFMEMNTRLQVEHPVTEMITGQDLVEWQLLVAAGSPLP-LGQKELAIGGHAIEARIYAEDPARDFLPSIGRLAHLRTP-VEGANVRIDTGVGEGGEVSIYYDPMIAKLIVWDTDRAGALRRLRQALADYQVVGVTTNIGFLGSVAAHPAFAAGDLDTGFIERHRADL-FPDPRPASDRTLALASLDVLLRRADEARRAAATSLDP--SSPWHQTSGWRLNCDNHHFLHFLDGETAVKVTVHY---------RAEGYLLEL--PGGPL-LVRGERDAAGDLLADLGGARVKATV----------------VRHGAILTIMKRG--------RSHTLAIHDPYALTGDEEGTG--GRLTAPMPGKVVAVMVEPGERVEKGRPLMILEAMKMEHTITAPRPGLVERLNFTVGCLVSEGVELLAL 662          
BLAST of NO18G01040 vs. NCBI_GenBank
Match: PJI37924.1 (3-methylcrotonyl-CoA carboxylase [Ferrovibrio sp.])

HSP 1 Score: 512.7 bits (1319), Expect = 1.800e-141
Identity = 321/708 (45.34%), Postives = 406/708 (57.34%), Query Frame = 0
Query:   44 IIKKLLIANRGEIACRIIRTARKMGIKTVAVYSDADARAQFVQMADEAHWIGPSPTRESYLVKEKILAVAQRAGAQALHPGYGFLSENPDFAEMCQAAGVLFVGPSVSALRAMGSKAAAKQIMTDAGVPVTPSYYGEDQDDARLVAEAEK--------------------------------------------------------------VFGDSHGNAVHLYERDCSVQRRHQKVLEESPAPGLDRGMREEMGRAAVLAAKAVGYTGAGTVEFLVDPV----TEAFYFCEMNTRLQVEHCVTEMVTGVDLVEWQLRVAAGEPLPVVKQEEIMTKGHAIEARIYAENPAKGFLPATGFLKRLRTPKAEEGGVRVETGVVEGDEVSMFYDPMIAKLLTWAPTRGEALRKMKGALQEYQIAGLPNNLEFLERCVGHPAFARGAVTTGFLVEHERDVSIPPPSPPSNHLVALAAHALVEGR-----EGGTRGGSPWVGGAWRGLSGERSLPLTMVMEGLEEVPLVLRVNVSPPNEEKREEGVVVSVKTPDGEVHRVVGRHGKNXXXXXXXXXXXXEATIDGSVTYKYHAWIKDGGPRDGAAIQLWLRSGGLVDDPLSRLAFSLSVPAIALGKESGGSIHPKVIAPMPGKVVKVLVKDGEEVKKGQALMILEAMKMEHVIAAPRDATVEAVARGVGDVVQEGVALISLQA 681
            + +K+LIANRGEIACR++RTA++MG+ TVAVYSDADA A  V MADEA  IG +P RESYL+ ++I+  A+R GAQA+HPGYGFLSEN  FA+ C+ AG++F+GP  SA+ AMG K AAK +M  A VPV P Y+G+DQ    L  EAE+                                                              VF DSHGNAVHL+ERDCSVQRRHQKVLEE+PAPG+   MR+ MG AAV AAKA+GY GAGTVEF+ D       + FYF EMNTRLQVEH VTEM+TG DLV WQL VAAG  LP+  Q+++   GHA+EARIYAE+P K FLP+ G L RLRTP A +G VR++TGV EGD V+ FYDPMIAKL+ W   R  ALR+M+ AL EYQIAG+  N  FL    GH AF  G + TGF+     D+ +PP  P S  ++ALAA A+   R     +  TR G PW    W  + G R     +  +G +E  L++R         +R+  ++  ++   G   RV     +              A IDG    +  A I     RD   + L          P      ++  P  A   + GGS   ++ APMPGK+V+VLV++G  V KGQ LMILEAMKMEH I+AP    V  V    G+ V EG AL+ ++A
Sbjct:    1 MFRKILIANRGEIACRVVRTAKRMGVATVAVYSDADANALHVAMADEAVHIGAAPVRESYLLPDRIIDAAKRTGAQAIHPGYGFLSENASFAKACKDAGLVFIGPPPSAIEAMGLKGAAKALMEKAKVPVVPGYHGDDQSPDLLAREAERIGYPVLIKAVAGGGGKGMRRVDSAQEFAAALAGAQREGANAFGDDKVLLEKYLVKPRHIEIQVFADSHGNAVHLFERDCSVQRRHQKVLEEAPAPGMPPEMRKAMGDAAVAAAKAIGYVGAGTVEFIADVSDGLRPDRFYFMEMNTRLQVEHPVTEMITGQDLVAWQLEVAAGGKLPLT-QDKLTITGHAVEARIYAEDPQKNFLPSVGTLHRLRTP-AVDGHVRIDTGVREGDSVTPFYDPMIAKLIVWDADRTSALRRMRQALGEYQIAGVTTNTAFLIALAGHQAFIGGDLDTGFIERFRADL-LPPAEPASITVLALAALAVTLERRAVVAQAATRSGDPW--SPWSAVDGWR-----VNDQGWDE--LLMR---------ERDNDILCRIEYLSGGALRVHAHDTETVVQGVMDSEGGLAAVIDGR---RLRAGIV---RRDDDLVVLL---------PGETHRLTIIDPRAAGDMDEGGS--GQLNAPMPGKIVQVLVEEGASVDKGQPLMILEAMKMEHTISAPDKGKVAKVNFMAGEQVPEGAALLQIEA 670          
BLAST of NO18G01040 vs. NCBI_GenBank
Match: WP_020201841.1 (acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha [Cupriavidus sp. WS])

HSP 1 Score: 511.5 bits (1316), Expect = 3.900e-141
Identity = 317/718 (44.15%), Postives = 407/718 (56.69%), Query Frame = 0
Query:   44 IIKKLLIANRGEIACRIIRTARKMGIKTVAVYSDADARAQFVQMADEAHWIGPSPTRESYLVKEKILAVAQRAGAQALHPGYGFLSENPDFAEMCQAAGVLFVGPSVSALRAMGSKAAAKQIMTDAGVPVTPSYYGEDQDDARLVAEAEK--------------------------------------------------------------VFGDSHGNAVHLYERDCSVQRRHQKVLEESPAPGLDRGMREEMGRAAVLAAKAVGYTGAGTVEFLVDPVTEAFYFCEMNTRLQVEHCVTEMVTGVDLVEWQLRVAAGEPLPVVKQEEIMTKGHAIEARIYAENPAKGFLPATGFLKRLRTPKAEE----------GGVRVETGVVEGDEVSMFYDPMIAKLLTWAPTRGEALRKMKGALQEYQIAGLPNNLEFLERCVGHPAFARGAVTTGFLVEHERDVSIPPPSPPSNHLVALAAHALVEGREGGTR-----GGSPW-VGGAWRGLSGERSLPLTM-VMEGLEEVPLVLRVNVSPPNEEKREEGVVVSVKTPDGEVHRVVGRHGKNXXXXXXXXXXXXEATIDGSVTYKYHAWIKDGGPRDGAAIQLWLRSGGL---VDDPLSRLAFSLSVPAIALGKESGGSIHPKVIAPMPGKVVKVLVKDGEEVKKGQALMILEAMKMEHVIAAPRDATVEAVARGVGDVVQEGVALISLQ 680
            +  K+LIANRGEIACR+  T R++GI+TVAVYSDADA A+ V + DEA  IG +  R+SYL  E I+AVA   GAQA+HPGYGFLSEN  FAE C AAG++F+GP  S++RAMGSK+AAKQ+M  A VP+ P Y+GEDQD A L  EA++                                                              VF D+HGN V+L+ERDCSVQRRHQKVLEE+PAPG+    R  MG AAV AA+AVGY GAGTVEF+ +    +FYF EMNTRLQVEH VTEM+TG DLVEWQLRVAAGEPLP ++Q+++   GHA+EAR+YAENP KGFLP+TG L+ LRTP A +           G R+++GV EGD +S FYDPMIAKL+ W   R EAL +M  AL +Y + GL  N+ FL+R V  PAFA   + TG L+E       PP  P     +ALA  AL++ +    R       SPW  GGAWR L+GE +    +   EG  E  L          ++   + + V+ +T           H  +            E T+ GS               DG AI ++  S      V DPL          A A G ++ G    K++APMPG+++ V+VK G  + KG  L+++EAMKMEH + AP D  V+ V   VGD VQ+G  L++L+
Sbjct:    1 MFNKILIANRGEIACRVAATCRRLGIRTVAVYSDADAGARHVALCDEAVHIGGAAARDSYLRGEHIIAVALATGAQAIHPGYGFLSENDGFAEACAAAGLVFIGPPASSIRAMGSKSAAKQLMEKAAVPLVPGYHGEDQDAALLRREADRIGYPVLLKASAGGGGKGMRVVEAGAGFEAALASVKREASASFGDDKVLVEKYLTRPRHIEIQVFADTHGNCVYLFERDCSVQRRHQKVLEEAPAPGMSEERRRAMGDAAVAAAQAVGYVGAGTVEFIANQ-DGSFYFMEMNTRLQVEHPVTEMITGQDLVEWQLRVAAGEPLP-LRQDQLRIHGHALEARVYAENPDKGFLPSTGTLRYLRTPAAVQFELGQDRGGPAGARIDSGVREGDTISPFYDPMIAKLIVWGRDREEALARMAQALAQYHVVGLSTNIAFLQRLVASPAFATADLDTG-LIERNHAALFPPAGPEGIDAIALAVAALLDAQARARRVDPADAHSPWRHGGAWR-LNGEATRRFRLRTAEGETEASL---------RDDGARQWLSVNGQTVPFRAASAGDGHALD----------LGERTVKGSTHL------------DGDAIHVFSGSRQTRLEVIDPL----------AHAAGADAEGG---KLVAPMPGRIIAVMVKAGAVIGKGDPLIVMEAMKMEHTLTAPADGVVQEVLYAVGDQVQDGAQLVTLE 670          
BLAST of NO18G01040 vs. NCBI_GenBank
Match: OQR82408.1 (methylcrotonoyl-CoA carboxylase subunit alpha [Achlya hypogyna])

HSP 1 Score: 511.1 bits (1315), Expect = 5.100e-141
Identity = 322/732 (43.99%), Postives = 406/732 (55.46%), Query Frame = 0
Query:   17 RLLPLHMRALSSAAAAVRAIPALETSTIIKKLLIANRGEIACRIIRTARKMGIKTVAVYSDADARAQFVQMADEAHWIGPSPTRESYLVKEKILAVAQRAGAQALHPGYGFLSENPDFAEMCQAAGVLFVGPSVSALRAMGSKAAAKQIMTDAGVPVTPSYYGEDQDDARLVAEAEK--------------------------------------------------------------VFGDSHGNAVHLYERDCSVQRRHQKVLEESPAPGLDRGMREEMGRAAVLAAKAVGYTGAGTVEFLVDPVTEAFYFCEMNTRLQVEHCVTEMVTGVDLVEWQLRVAAGEPLPVVKQEEIMTKGHAIEARIYAENPAKGFLPATGFLKRLRTPKAEEGGVRVETGVVEGDEVSMFYDPMIAKLLTWAPTRGEALRKMKGALQEYQIAGLPNNLEFLERCVGHPAFARGAVTTGFLVEHERDVSIPPPSPPSNHLVALAAHALVEGREGGTRGGSPWVG---GAWRGLSGERSLPLTMVMEGL--EEVPLVLRVNVSPPNEEKREEGVVVSVKTPDGEVHRVVGRHGKNXXXXXXXXXXXXEATIDGSVTYKY--HAWIKDGGPRDGAAIQLWLRSGGLVDDPLSRLAFSLSVPAIALGKESGGS-IHPKVIAPMPGKVVKVLVKDGEEVKKGQALMILEAMKMEHVIAAPRDATVEAVARGVGDVVQEGVALISL 679
            RL  L  R    A+   R+    + + +  K+LIANRGEIACR+ R+A+K+G++TVAVYSDADA AQ V+MADEA+ +GP P  ESYL+ ++IL +A+ +GAQA+HPGYGFLSEN  FA  C AA V F+GP V A+ AMGSK+A+K IM  AGVPVTP Y+GEDQ   R+ +EA K                                                              +FGD HGN VHL+ERDCSVQRRHQKVLEE+PAP +   +R++MG AAV AAKAVGY GAGTVEFL+D   E+FYF EMNTRLQVEH VTE +T  DLVE QL+VAAG+ LP V+QE++   GHAIEARIYAENP   FLP +G L  LR P   +  VRV+TG+VEGD VS+FYDPMIAKL+     R +AL  +  AL++YQI GLP N+EF+ R   HP F +G V T FL ++  DV  P PS P+ H   L A AL            P        W  L   RSL        L  E  P+ L V     +           V     E  RV G    N            + T   +V +K+  H ++ DG                       R  + L++P      E GG+     ++ PMPGK++KV+ K G+ +K+ Q L+I+EAMKMEHVI APRD  V  V   VGD V +G  L+ L
Sbjct:    3 RLPSLRARFARQASTFARS----DGTPMFSKILIANRGEIACRVQRSAKKLGVRTVAVYSDADANAQHVKMADEAYRLGPPPAAESYLLFDEILRIAKESGAQAIHPGYGFLSENAAFARACAAANVEFIGPPVPAIEAMGSKSASKDIMIKAGVPVTPGYHGEDQSYERIRSEAAKIGYPVLLKAVLGGGGKGMRIVDSESELQEAMDACKREAKASFASTDILVEKYLRRPRHVELQIFGDKHGNVVHLFERDCSVQRRHQKVLEEAPAPHMSEALRKKMGDAAVAAAKAVGYVGAGTVEFLLDE-DESFYFMEMNTRLQVEHPVTEFITQQDLVEMQLKVAAGQALP-VRQEDLKIHGHAIEARIYAENPYNNFLPGSGKLHHLRLPPLSD-SVRVDTGIVEGDSVSIFYDPMIAKLVVHGKDRQDALDGLIRALKQYQIVGLPTNIEFVARTAAHPEFVKGGVDTSFLNKYGDDVLAPYPSLPA-HAPLLGAVALXXXXXXXXAAFEPTAADPTSPWSSLKNFRSLETLTRTFTLTHETTPIALSVACLSAD--------AFDVAVDGAEPVRVTGAVAANGDFRLTVGTQSFDGT---AVVFKHDLHLFVNDGS---------------------LRYDYKLALPEANYEGEGGGAGGASSLVTPMPGKIIKVMAKAGDAIKEDQPLLIMEAMKMEHVIRAPRDGVVGEVNCDVGDFVTDGHVLVEL 694          
The following BLAST results are available for this feature:
BLAST of NO18G01040 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM23339.11.900e-26067.36methylcrotonoyl- carboxylase [Nannochloropsis gadi... [more]
WP_028445040.12.200e-14447.63acetyl/propionyl/methylcrotonyl-CoA carboxylase su... [more]
WP_067559679.17.200e-14344.63acetyl/propionyl/methylcrotonyl-CoA carboxylase su... [more]
WP_020657056.11.600e-14245.03acetyl/propionyl/methylcrotonyl-CoA carboxylase su... [more]
XP_004343939.13.600e-14244.03acetylCoA carboxylase, biotin carboxylase subunit,... [more]
WP_103904145.13.600e-14245.06acetyl/propionyl/methylcrotonyl-CoA carboxylase su... [more]
WP_039744954.16.100e-14245.73acetyl/propionyl/methylcrotonyl-CoA carboxylase su... [more]
PJI37924.11.800e-14145.343-methylcrotonyl-CoA carboxylase [Ferrovibrio sp.][more]
WP_020201841.13.900e-14144.15acetyl/propionyl/methylcrotonyl-CoA carboxylase su... [more]
OQR82408.15.100e-14143.99methylcrotonoyl-CoA carboxylase subunit alpha [Ach... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL008nonsL008Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR064ncniR064Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR043ngnoR043Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003958NSK003958Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO18G01040.1NO18G01040.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|560653gene_9540Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100053g29gene7136Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO18G01040.1NO18G01040.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO18G01040 ID=NO18G01040|Name=NO18G01040|organism=Nannochloropsis oceanica|type=gene|length=2576bp
ATGTGGGTCACCCGCAGGCTCCCTGCCGCGCGCCTTGCTACACAGAGACG
CTTGCTACCGCTTCATATGCGTGCCTTGTCTTCTGCTGCGGCTGCCGTTC
GCGCCATCCCGGCCCTCGAAACAAGCACCATAATTAAAAAACTTCTGATC
GCAAACCGCGGTGAAATTGCCTGCCGTATAATCCGGACCGCCCGCAAAAT
GGGGATCAAGACAGTGGCCGTTTACAGCGATGCAGACGCCAGGGCGCAAT
TCGTGCAGATGGCCGACGAGGCGCATTGGATTGGTCCCTCTCCCACCAGG
GAATCGTACCTGGTTAAGGAGAAGATCCTGGCGGTCGCTCAGCGAGCAGG
CGCTCAGGCCTTGCATCCTGGTTATGGCTTCCTGTCCGAGAACCCGGATT
TCGCAGAGATGTGCCAGGCAGCGGGGGTGCTATTCGTCGGGCCTTCTGTG
TCGGCGCTGAGGGCAATGGGGTCCAAGGCGGCCGCGAAACAGATAATGAC
TGATGCAGGCGTGCCTGTCACTCCATCTTATTACGGCGAAGATCAAGATG
ACGCGCGCTTGGTGGCAGAGGCGGAGAAGgtcgggtatcccgtgatgatt
aaggcagtgactggaggggggggaaggggatgaggagggtattaagcgcc
tctgattttttaccagcgctcgaggcgtgtcgccgggaggccttgaagtc
cttcgggagggataggatgctgattgagaagtatttggtcgatccccgtc
atattgaacttcagGTTTTCGGAGACAGCCATGGAAATGCCGTGCATTTG
TATGAGAGAGATTGTAGCGTGCAAAGGCGACATCAGAAGGTCCTTGAAGA
ATCGCCCGCGCCTGGGTTGGACAGGGGAATGAGGGAGGAAATGGGTCGAG
CCGCTGTGTTGGCGGCGAAGGCTGTGGGGTACACGGGGGCAGGTACGGTG
GAATTTCTGGTTGATCCTGTGACGGAGGCCTTTTATTTCTGTGAGATGAA
CACACGGCTACAGGTGGAGCACTGTGTGACGGAGATGGTGACAGGCGTCG
ACTTGGTTGAGTGGCAGCTCAGGGTAGCGGCGGGCGAGCCCCTGCCAGTG
GTGAAACAGGAGGAAATAATGACAAAAGGGCATGCAATTGAAGCAAGAAT
CTATGCCGAGAATCCAGCGAAAGGATTTTTGCCTGCAACAGGTTTTTTGA
AGAGGCTACGGACGCCCAAGGCGGAGGAAGGGGGGGTGAGGGTGGAAACT
GGGGTGGTGGAGGGGGATGAGGTTAGTATGTTTTATGACCCCATGATTGC
CAAGCTGCTTACATGGGCACCGACAAGGGGGGAGGCATTACGGAAGATGA
AGGGGGCGTTGCAGGAGTATCAGATCGCGGGGTTACCCAACAACCTGGAG
TTTCTCGAGAGGTGTGTGGGGCATCCAGCCTTTGCACGAGGAGCGGTGAC
AACAGGTTTCTTGGTTGAGCATGAAAGGGACGTGTCTATTCCTCCTCCGA
GTCCGCCGTCAAATCATTTGGTGGCTTTGGCAGCGCATGCATTGGTGGAG
GGGAGGGAGGGAGGGACGCGGGGGGGTTCGCCATGGGTGGGGGGGGCATG
GAGGGGGCTGTCTGGAGAGCGGAGTTTGCCTTTGACGATGGTGATGGAGG
GGTTGGAGGAGGTGCCGCTTGTGCTGCGAGTAAATGTTTCTCCCCCCAAT
GAGGAAAAGAGGGAGGAAGGGGTGGTAGTGAGCGTGAAGACGCCGGACGG
GGAGGTGCATCGTGTGGTGGGACGCCACGGCAAGAACAGCAGCAGCAGCA
GCAGCAGCAATGACGATGAACGAGAAGCGACCATTGATGGAAGCGTCACC
TACAAATATCACGCTTGGATCAAGGACGGAGGTCCGAGAGACGGAGCCGC
CATCCAGCTCTGGCTGCGCTCGGGTGGGTTAGTCGACGACCCCCTCTCTC
GTCTCGCTTTCTCTTTAAGCGTGCCTGCTATAGCCCTGGGGAAAGAATCG
GGAGGGAGTATCCATCCCAAAGTGATTGCGCCCATGCCGGGGAAAGTGGT
CAAGGTGCTGGTGAAGGATGGAGAGGAAGTGAAGAAGGGCCAGGCGCTTA
TGATTTTGGAAGCGATGAAGATGGAGCATGTGATTGCGGCGCCACGGGAC
GCGACAGTTGAGGCTGTGGCACGAGGGGTGGGAGATGTGGTGCAGGAAGG
GGTTGCGCTAATCAGCCTTCAGGCAGTTTGAGAGGGAAAGGGAGGGAAGG
TAGGCATGCGGTGGGAATATGCGGGGACAGGAGTAGTGTGTAGGTTTGTG
CAATAGAATTTATACAAGGAGGGATGGGGGGAGGGAAGGATAGAGAGCAG
GGGCGAAGGCATCAAAAAATAAATTGGACCGAGGAATTGCGGGAACTGGG
TTTTCTTTTTCATTTAAAAAAATTTATGTCAATAACCTGTGGGCCGATAG
TGATGAGTGTAGGTAGGTATATTTAATATCTCCGTGTGCGAAGAGTCAGG
GAAGGAAGCGAGCGAATGGTTGTTTAACTAGTTGTCTATAATTCCGCAAT
GAAGAAATATACCACTTTCTGGAACC
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protein sequence of NO18G01040.1

>NO18G01040.1-protein ID=NO18G01040.1-protein|Name=NO18G01040.1|organism=Nannochloropsis oceanica|type=polypeptide|length=682bp
MWVTRRLPAARLATQRRLLPLHMRALSSAAAAVRAIPALETSTIIKKLLI
ANRGEIACRIIRTARKMGIKTVAVYSDADARAQFVQMADEAHWIGPSPTR
ESYLVKEKILAVAQRAGAQALHPGYGFLSENPDFAEMCQAAGVLFVGPSV
SALRAMGSKAAAKQIMTDAGVPVTPSYYGEDQDDARLVAEAEKVFGDSHG
NAVHLYERDCSVQRRHQKVLEESPAPGLDRGMREEMGRAAVLAAKAVGYT
GAGTVEFLVDPVTEAFYFCEMNTRLQVEHCVTEMVTGVDLVEWQLRVAAG
EPLPVVKQEEIMTKGHAIEARIYAENPAKGFLPATGFLKRLRTPKAEEGG
VRVETGVVEGDEVSMFYDPMIAKLLTWAPTRGEALRKMKGALQEYQIAGL
PNNLEFLERCVGHPAFARGAVTTGFLVEHERDVSIPPPSPPSNHLVALAA
HALVEGREGGTRGGSPWVGGAWRGLSGERSLPLTMVMEGLEEVPLVLRVN
VSPPNEEKREEGVVVSVKTPDGEVHRVVGRHGKNSSSSSSSNDDEREATI
DGSVTYKYHAWIKDGGPRDGAAIQLWLRSGGLVDDPLSRLAFSLSVPAIA
LGKESGGSIHPKVIAPMPGKVVKVLVKDGEEVKKGQALMILEAMKMEHVI
AAPRDATVEAVARGVGDVVQEGVALISLQAV*
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Synonyms
Publications