NO18G00970, NO18G00970 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO18G00970 vs. NCBI_GenBank
Match: ORX60724.1 (hypothetical protein DM01DRAFT_1332846 [Hesseltinella vesiculosa]) HSP 1 Score: 99.4 bits (246), Expect = 4.000e-17 Identity = 54/126 (42.86%), Postives = 86/126 (68.25%), Query Frame = 0 Query: 406 RQRKLVEELQRIYPIERRSGE-QEYRIRGLELPADTVNTTRDDDLIASALGYVCHVLVMLSKYLEVPLRYALECRSSRSLIQDATV---AYAVFPLYKRGVERERFEWAVYLLKKNIQQLLCARGV 528 RQ++L+ +L IYPIE+ + Q++RIRGL LP ++V D++++A+ALG+ H++ ML+ YL +PLRY ++ SR+ I D FPLY +GV++ RFE+ V+LL KNI+Q++ A G+ Sbjct: 382 RQKELIADLFSIYPIEQSFDDFQQFRIRGLYLP-NSVYAGCDEEVVATALGFTAHLVSMLAYYLAIPLRYPIDPMGSRASIHDPVSMIHGSRTFPLYSKGVDKYRFEFGVFLLNKNIEQMMNAYGL 506
BLAST of NO18G00970 vs. NCBI_GenBank
Match: EXX76318.1 (hypothetical protein RirG_034170 [Rhizophagus irregularis DAOM 197198w] >GBC18703.1 uv radiation resistance protein [Rhizophagus irregularis DAOM 181602] >PKC72561.1 hypothetical protein RhiirA1_452196 [Rhizophagus irregularis]) HSP 1 Score: 99.0 bits (245), Expect = 5.200e-17 Identity = 57/127 (44.88%), Postives = 86/127 (67.72%), Query Frame = 0 Query: 407 QRKLVEELQRIYPIE-RRSGEQEYRIRGLELPADTVNTTRDDDLIASALGYVCHVLVMLSKYLEVPLRYALECRSSRSLIQDATVA----YAVFPLYKRGVERERFEWAVYLLKKNIQQLLCARGVS 529 Q++LV +L I+PIE + ++I G+ LP ++V T DD+ +A+ALG+ CH++ ML+ YL VPLR+ + SSRS I+D A FPLY +G +R RFE+AV+LL KNI+QL+ ++G+S Sbjct: 149 QKELVADLLNIFPIEPTHTDTFSFKILGVPLP-NSVFTGCDDEQVATALGFTCHLINMLAYYLGVPLRFPMTPMSSRSSIRDPITASLGDSRQFPLYVKGADRYRFEYAVFLLNKNIEQLMNSQGIS 274
BLAST of NO18G00970 vs. NCBI_GenBank
Match: XP_016608766.1 (hypothetical protein SPPG_03843 [Spizellomyces punctatus DAOM BR117] >KND00727.1 hypothetical protein SPPG_03843 [Spizellomyces punctatus DAOM BR117]) HSP 1 Score: 99.0 bits (245), Expect = 5.200e-17 Identity = 56/126 (44.44%), Postives = 80/126 (63.49%), Query Frame = 0 Query: 403 VALRQRKLVEELQRIYPIERRSGEQE--YRIRGLELPADTVNTTRDDDLIASALGYVCHVLVMLSKYLEVPLRYALECRSSRSLIQDATVAYAV----FPLYKRGVERERFEWAVYLLKKNIQQLL 523 V RQ+ L+ + I+PI R + Y IRG+ LP + T DD+ IA+ALG+VCH+L M++ YL+VPLRY ++ SSRS I D + FPLY RG +R RF++ V+L+ KNI+QL+ Sbjct: 382 VRRRQKDLIVDAANIFPIARDTALNSAFYTIRGIPLP-HSEYTGHDDEKIAAALGFVCHLLYMIAYYLDVPLRYPMKLMSSRSSITDIVSEHYTGSKEFPLYSRGADRMRFDYGVFLMNKNIEQLM 506
BLAST of NO18G00970 vs. NCBI_GenBank
Match: PKY15601.1 (hypothetical protein RhiirB3_427833 [Rhizophagus irregularis]) HSP 1 Score: 99.0 bits (245), Expect = 5.200e-17 Identity = 57/127 (44.88%), Postives = 86/127 (67.72%), Query Frame = 0 Query: 407 QRKLVEELQRIYPIE-RRSGEQEYRIRGLELPADTVNTTRDDDLIASALGYVCHVLVMLSKYLEVPLRYALECRSSRSLIQDATVA----YAVFPLYKRGVERERFEWAVYLLKKNIQQLLCARGVS 529 Q++LV +L I+PIE + ++I G+ LP ++V T DD+ +A+ALG+ CH++ ML+ YL VPLR+ + SSRS I+D A FPLY +G +R RFE+AV+LL KNI+QL+ ++G+S Sbjct: 40 QKELVADLLNIFPIEPTHTDTFSFKILGVPLP-NSVFTGCDDEQVATALGFTCHLINMLAYYLGVPLRFPMTPMSSRSSIRDPITASLGDSRQFPLYVKGADRYRFEYAVFLLNKNIEQLMNSQGIS 165
BLAST of NO18G00970 vs. NCBI_GenBank
Match: POG82243.1 (hypothetical protein GLOIN_2v1500235, partial [Rhizophagus irregularis DAOM 181602=DAOM 197198]) HSP 1 Score: 99.0 bits (245), Expect = 5.200e-17 Identity = 57/127 (44.88%), Postives = 86/127 (67.72%), Query Frame = 0 Query: 407 QRKLVEELQRIYPIE-RRSGEQEYRIRGLELPADTVNTTRDDDLIASALGYVCHVLVMLSKYLEVPLRYALECRSSRSLIQDATVA----YAVFPLYKRGVERERFEWAVYLLKKNIQQLLCARGVS 529 Q++LV +L I+PIE + ++I G+ LP ++V T DD+ +A+ALG+ CH++ ML+ YL VPLR+ + SSRS I+D A FPLY +G +R RFE+AV+LL KNI+QL+ ++G+S Sbjct: 149 QKELVADLLNIFPIEPTHTDTFSFKILGVPLP-NSVFTGCDDEQVATALGFTCHLINMLAYYLGVPLRFPMTPMSSRSSIRDPITASLGDSRQFPLYVKGADRYRFEYAVFLLNKNIEQLMNSQGIS 274
BLAST of NO18G00970 vs. NCBI_GenBank
Match: XP_002895854.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY54617.1 conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 98.6 bits (244), Expect = 6.800e-17 Identity = 58/129 (44.96%), Postives = 83/129 (64.34%), Query Frame = 0 Query: 406 RQRKLVEELQRIYPIERRSGEQEYRIRGLELPAD--TVNTTRDDDLIASALGYVCHVLVMLSKYLEVPLRYALECRSSRSLIQD-ATVAYAVFPLYKRGVERERFEWAVYLLKKNIQQLLCARGVSRML 532 RQ LV++L +YPIE G EY IRG+ + T D+D+I++ALGY+ H++ MLSKYL+V LRY + SSRS ++D +PLY++GVERER E A+ L+K+++QLL AR + L Sbjct: 394 RQAMLVKQLGTVYPIE-YVGAGEYSIRGIRIANSDFTGGGRNDEDMISTALGYIAHLVFMLSKYLQVNLRYRVVPYSSRSFLKDEINDPQGEYPLYRKGVERERHEKAIRFLRKDVEQLLFARSLDPTL 521
BLAST of NO18G00970 vs. NCBI_GenBank
Match: XP_024582861.1 (uv radiation resistance-associated protein [Plasmopara halstedii] >CEG46492.1 uv radiation resistance-associated protein [Plasmopara halstedii]) HSP 1 Score: 98.6 bits (244), Expect = 6.800e-17 Identity = 58/129 (44.96%), Postives = 83/129 (64.34%), Query Frame = 0 Query: 406 RQRKLVEELQRIYPIERRSGEQEYRIRGLELPADTVN--TTRDDDLIASALGYVCHVLVMLSKYLEVPLRYALECRSSRSLIQD-ATVAYAVFPLYKRGVERERFEWAVYLLKKNIQQLLCARGVSRML 532 RQ LV++L +YPIE G EY IRG+ + ++ D+++I++ALGY+ H++ MLSKYL V LRY + SSRS ++D +PLYKRGVE+ER E A+ L+KN++QLL AR + L Sbjct: 391 RQAMLVKQLGTVYPIE-YVGAGEYSIRGIRIANSDLSGGGRNDEEMISTALGYIAHLVFMLSKYLHVNLRYRVVPYSSRSFLKDEINDPSGEYPLYKRGVEKERHEKAIRFLRKNVEQLLFARSLDPTL 518
BLAST of NO18G00970 vs. NCBI_GenBank
Match: ETI45518.1 (hypothetical protein F443_09942 [Phytophthora parasitica P1569] >ETK85472.1 hypothetical protein L915_09739 [Phytophthora parasitica] >ETL38871.1 hypothetical protein L916_09643 [Phytophthora parasitica] >ETL92020.1 hypothetical protein L917_09566 [Phytophthora parasitica] >ETO74132.1 hypothetical protein F444_10038 [Phytophthora parasitica P1976] >ETP15298.1 hypothetical protein F441_09892 [Phytophthora parasitica CJ01A1] >ETP43375.1 hypothetical protein F442_09846 [Phytophthora parasitica P10297] >KUF85913.1 UV radiation resistance-associated protein [Phytophthora nicotianae]) HSP 1 Score: 98.2 bits (243), Expect = 8.800e-17 Identity = 58/129 (44.96%), Postives = 83/129 (64.34%), Query Frame = 0 Query: 406 RQRKLVEELQRIYPIERRSGEQEYRIRGLELPAD--TVNTTRDDDLIASALGYVCHVLVMLSKYLEVPLRYALECRSSRSLIQD-ATVAYAVFPLYKRGVERERFEWAVYLLKKNIQQLLCARGVSRML 532 RQ LV++L +YPIE G EY IRG+ + T D+++I++ALGY+ H++ MLSKYL+V LRY + SSRS ++D +PLY+RGVERER E A+ L+K+++QLL AR + L Sbjct: 393 RQAMLVKQLGTVYPIE-YVGAGEYSIRGIRIANSDFTGGGRNDEEMISTALGYIAHLVFMLSKYLQVNLRYRVVPYSSRSFLKDEINDPQGEYPLYRRGVERERHEKAIRFLRKDVEQLLFARSLDPTL 520
BLAST of NO18G00970 vs. NCBI_GenBank
Match: ETI45520.1 (hypothetical protein, variant 2 [Phytophthora parasitica P1569] >ETK85474.1 hypothetical protein, variant 2 [Phytophthora parasitica] >ETL38873.1 hypothetical protein, variant 2 [Phytophthora parasitica] >ETL92022.1 hypothetical protein, variant 2 [Phytophthora parasitica] >ETO74134.1 hypothetical protein, variant 2 [Phytophthora parasitica P1976] >ETP15300.1 hypothetical protein, variant 2 [Phytophthora parasitica CJ01A1] >ETP43377.1 hypothetical protein, variant 2 [Phytophthora parasitica P10297]) HSP 1 Score: 98.2 bits (243), Expect = 8.800e-17 Identity = 58/129 (44.96%), Postives = 83/129 (64.34%), Query Frame = 0 Query: 406 RQRKLVEELQRIYPIERRSGEQEYRIRGLELPAD--TVNTTRDDDLIASALGYVCHVLVMLSKYLEVPLRYALECRSSRSLIQD-ATVAYAVFPLYKRGVERERFEWAVYLLKKNIQQLLCARGVSRML 532 RQ LV++L +YPIE G EY IRG+ + T D+++I++ALGY+ H++ MLSKYL+V LRY + SSRS ++D +PLY+RGVERER E A+ L+K+++QLL AR + L Sbjct: 256 RQAMLVKQLGTVYPIE-YVGAGEYSIRGIRIANSDFTGGGRNDEEMISTALGYIAHLVFMLSKYLQVNLRYRVVPYSSRSFLKDEINDPQGEYPLYRRGVERERHEKAIRFLRKDVEQLLFARSLDPTL 383
BLAST of NO18G00970 vs. NCBI_GenBank
Match: ETM45317.1 (hypothetical protein L914_09609 [Phytophthora parasitica]) HSP 1 Score: 98.2 bits (243), Expect = 8.800e-17 Identity = 58/129 (44.96%), Postives = 83/129 (64.34%), Query Frame = 0 Query: 406 RQRKLVEELQRIYPIERRSGEQEYRIRGLELPAD--TVNTTRDDDLIASALGYVCHVLVMLSKYLEVPLRYALECRSSRSLIQD-ATVAYAVFPLYKRGVERERFEWAVYLLKKNIQQLLCARGVSRML 532 RQ LV++L +YPIE G EY IRG+ + T D+++I++ALGY+ H++ MLSKYL+V LRY + SSRS ++D +PLY+RGVERER E A+ L+K+++QLL AR + L Sbjct: 393 RQAMLVKQLGTVYPIE-YVGAGEYSIRGIRIANSDFTGGGRNDEEMISTALGYIAHLVFMLSKYLQVNLRYRVVPYSSRSFLKDEINDPQGEYPLYRRGVERERHEKAIRFLRKDVEQLLFARSLDPTL 520 The following BLAST results are available for this feature:
BLAST of NO18G00970 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO18G00970 ID=NO18G00970|Name=NO18G00970|organism=Nannochloropsis oceanica|type=gene|length=2584bpback to top protein sequence of NO18G00970.1 >NO18G00970.1-protein ID=NO18G00970.1-protein|Name=NO18G00970.1|organism=Nannochloropsis oceanica|type=polypeptide|length=581bpback to top Synonyms
Publications
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