NO18G00920, NO18G00920 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO18G00920 vs. NCBI_GenBank
Match: OQS02994.1 (40S ribosomal protein S7 [Thraustotheca clavata]) HSP 1 Score: 231.9 bits (590), Expect = 1.700e-57 Identity = 130/202 (64.36%), Postives = 155/202 (76.73%), Query Frame = 0 Query: 5 KIVKPKGQEADDTDLKVASELFQLESNNPEWKADLKDLYITAAKEVD-VGKTQAIVVFVPFKLLKVYHKIQQRLVRELEKKFSGSHVVLVAQRTILGKSYGRSTKTQGVRPRSRTLSAVQDAILE---------------DIVYPTEIVGKRTRCKVDGTKTLKVFLDNKDQMNVDYKLETFKEVYKKLTNKEVEFTFFVKQ 191 KIVKP GQ ADD + +VA EL LE+++ E KADLKDLYI AAK+VD VG +AIV+FVP++LLK ++KIQ RLVRELEKKFSG HVV++AQRTILGK + RS T R RSRTL+AVQDAIL+ D+VYPTEIVGKRTRCK+DG+K LKV+LD KDQ+NV+ KL+TF VYKKLTNKEV F F V+Q Sbjct: 4 KIVKPAGQVADDFEKQVAQELAALENSSAEIKADLKDLYILAAKQVDVVGGRKAIVIFVPYRLLKNFNKIQARLVRELEKKFSGRHVVIIAQRTILGKGHSRSHSTSAPRARSRTLTAVQDAILDVREIVDFCIRCWPLGDLVYPTEIVGKRTRCKLDGSKLLKVYLDPKDQVNVETKLDTFATVYKKLTNKEVVFEFPVQQ 205
BLAST of NO18G00920 vs. NCBI_GenBank
Match: GAY01336.1 (40S ribosomal protein S7 [Pythium insidiosum]) HSP 1 Score: 230.7 bits (587), Expect = 3.800e-57 Identity = 122/187 (65.24%), Postives = 150/187 (80.21%), Query Frame = 0 Query: 5 KIVKPKGQEADDTDLKVASELFQLESNNPEWKADLKDLYITAAKEVDVGK-TQAIVVFVPFKLLKVYHKIQQRLVRELEKKFSGSHVVLVAQRTILGKSYGRSTKTQGVRPRSRTLSAVQDAILEDIVYPTEIVGKRTRCKVDGTKTLKVFLDNKDQMNVDYKLETFKEVYKKLTNKEVEFTFFVKQ 191 KI KP+GQ AD+ + +VA ELF LE++ E K +LKDLYITAAK+VDV +AIV+FVP++L K ++KIQ RL RELEKKFSG HVV + QRTILGK + R+ K G RPRSRTL+AVQ+AIL+DIVYPTEIVGKRTR ++DG+K LKV+LD KDQ+NV+ KL+TF VYKKLTNK+V F F V Q Sbjct: 7 KIKKPEGQTADEFEQQVAQELFNLEASAAELKNELKDLYITAAKQVDVASGRKAIVIFVPYRLHKAFNKIQARLTRELEKKFSGRHVVFITQRTILGKGFARANKATGPRPRSRTLTAVQEAILDDIVYPTEIVGKRTRVRLDGSKLLKVYLDPKDQVNVETKLDTFATVYKKLTNKDVVFEFPVHQ 193
BLAST of NO18G00920 vs. NCBI_GenBank
Match: CCA23645.1 (40S ribosomal protein S7 putative [Albugo laibachii Nc14]) HSP 1 Score: 229.6 bits (584), Expect = 8.500e-57 Identity = 123/189 (65.08%), Postives = 149/189 (78.84%), Query Frame = 0 Query: 3 TRKIVKPKGQEADDTDLKVASELFQLESNNPEWKADLKDLYITAAKEVDVGK-TQAIVVFVPFKLLKVYHKIQQRLVRELEKKFSGSHVVLVAQRTILGKSYGRSTKTQGVRPRSRTLSAVQDAILEDIVYPTEIVGKRTRCKVDGTKTLKVFLDNKDQMNVDYKLETFKEVYKKLTNKEVEFTFFVKQ 191 T KIVKP+GQ D+ + +VA EL LE + E K +LKDLYITAAK+VDV +AIV+FVP++L+K + KIQ RL RELEKKFSG HVV +AQRTILG SY RS K +G RPRSRTL VQ++ILED+V+PT+IVGKRTRC +DGTK LKV LD KDQ+NV+ KL+TF VYKKLTNK+V F F V+Q Sbjct: 4 TSKIVKPEGQIPDEFEQQVAQELQNLEGSAGELKNELKDLYITAAKQVDVASGRKAIVMFVPYRLMKAFRKIQIRLTRELEKKFSGRHVVFIAQRTILGMSYARSRKVKGPRPRSRTLKTVQESILEDLVFPTDIVGKRTRCLLDGTKALKVHLDPKDQVNVETKLDTFATVYKKLTNKDVVFEFPVQQ 192
BLAST of NO18G00920 vs. NCBI_GenBank
Match: XP_002287872.1 (RS7, ribosomal protein 7 [Thalassiosira pseudonana CCMP1335] >EED95315.1 RS7, ribosomal protein 7 [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 229.6 bits (584), Expect = 8.500e-57 Identity = 120/183 (65.57%), Postives = 146/183 (79.78%), Query Frame = 0 Query: 5 KIVKPKGQEADDTDLKVASELFQLESNNPEWKADLKDLYITAAKEVDVGK-TQAIVVFVPFKLLKVYHKIQQRLVRELEKKFSGSHVVLVAQRTILGKSYGRSTKTQGVRPRSRTLSAVQDAILEDIVYPTEIVGKRTRCKVDGTKTLKVFLDNKDQMNVDYKLETFKEVYKKLTNKEVEFTF 187 KI K G E D+ ++ VA+EL QLE ++ E KA L+DLYITAAKEVD G +AIV++VP+K K Y KIQ RLVRELEKKFSG HV+++AQR ILGKSY RS KT+G+RPRSRTL+AVQDA+LEDIVYPTEI GKRTRCKVDG + LKV+LD +DQ NV+ + +T+ VY KLTNK+V F F Sbjct: 4 KIKKAGGAEPDEFEINVANELAQLELSSSELKASLRDLYITAAKEVDCGSGRKAIVIYVPYKQQKSYQKIQARLVRELEKKFSGRHVMIIAQRNILGKSYARSQKTKGLRPRSRTLTAVQDAVLEDIVYPTEITGKRTRCKVDGRRILKVYLDGRDQANVEGRTDTYAAVYGKLTNKQVSFHF 186
BLAST of NO18G00920 vs. NCBI_GenBank
Match: OWZ05244.1 (40S ribosomal protein S7 [Phytophthora megakarya]) HSP 1 Score: 229.2 bits (583), Expect = 1.100e-56 Identity = 121/187 (64.71%), Postives = 150/187 (80.21%), Query Frame = 0 Query: 5 KIVKPKGQEADDTDLKVASELFQLESNNPEWKADLKDLYITAAKEVDVGK-TQAIVVFVPFKLLKVYHKIQQRLVRELEKKFSGSHVVLVAQRTILGKSYGRSTKTQGVRPRSRTLSAVQDAILEDIVYPTEIVGKRTRCKVDGTKTLKVFLDNKDQMNVDYKLETFKEVYKKLTNKEVEFTFFVKQ 191 KIVKP+GQ AD+ +L+VA ELF LE + E K +LKDLYITAAK+VDV +AIV+FVPF+L + KIQ RLVRELEKKFSG HV+++AQRTILGK Y R+ G RPRSRTL+ VQ+ IL+D+V+PTEIVGKRTRC++DG+K LKV LD KDQ+NV+ KL+TF VYKKLTNK+V F F V++ Sbjct: 4 KIVKPEGQTADEFELQVAQELFNLEQSAAEIKNELKDLYITAAKQVDVSSGRKAIVIFVPFRLHASFKKIQARLVRELEKKFSGRHVIIIAQRTILGKGYSRANHGAGPRPRSRTLTHVQEQILDDLVFPTEIVGKRTRCRLDGSKLLKVHLDPKDQVNVETKLDTFATVYKKLTNKDVVFEFPVQE 190
BLAST of NO18G00920 vs. NCBI_GenBank
Match: XP_008911779.1 (hypothetical protein PPTG_15783 [Phytophthora parasitica INRA-310] >ETI37433.1 hypothetical protein F443_16570 [Phytophthora parasitica P1569] >ETK77655.1 hypothetical protein L915_16104 [Phytophthora parasitica] >ETL31100.1 hypothetical protein L916_15997 [Phytophthora parasitica] >ETL84354.1 hypothetical protein L917_15795 [Phytophthora parasitica] >ETM37526.1 hypothetical protein L914_15925 [Phytophthora parasitica] >ETN02822.1 hypothetical protein PPTG_15783 [Phytophthora parasitica INRA-310] >ETO66211.1 hypothetical protein F444_16547 [Phytophthora parasitica P1976] >ETP07294.1 hypothetical protein F441_16399 [Phytophthora parasitica CJ01A1] >ETP35366.1 hypothetical protein F442_16413 [Phytophthora parasitica P10297] >KUF90587.1 NPP1 protein [Phytophthora nicotianae] >KUG00249.1 40S ribosomal protein S7 [Phytophthora nicotianae]) HSP 1 Score: 228.4 bits (581), Expect = 1.900e-56 Identity = 121/183 (66.12%), Postives = 146/183 (79.78%), Query Frame = 0 Query: 5 KIVKPKGQEADDTDLKVASELFQLESNNPEWKADLKDLYITAAKEVDVGK-TQAIVVFVPFKLLKVYHKIQQRLVRELEKKFSGSHVVLVAQRTILGKSYGRSTKTQGVRPRSRTLSAVQDAILEDIVYPTEIVGKRTRCKVDGTKTLKVFLDNKDQMNVDYKLETFKEVYKKLTNKEVEFTF 187 KIVKP+GQ AD+ +L+VA EL LE + E K DLKDLYITAAK+VD+ +AIV+FVPF+L + KIQ RLVRELEKKFSG HVV++AQRTILGK Y R+ G RPRSRTL+ VQ+ IL+D+VYPTEIVGKRTRC++DG+K LKV LD KDQ+NV+ KL+TF VYKKLTNK+V F F Sbjct: 4 KIVKPEGQTADEFELQVAQELTNLEQSTAEIKNDLKDLYITAAKQVDISSGRKAIVIFVPFRLHASFKKIQTRLVRELEKKFSGRHVVIIAQRTILGKGYSRANHGAGPRPRSRTLTHVQEQILDDLVYPTEIVGKRTRCRLDGSKLLKVQLDPKDQVNVETKLDTFATVYKKLTNKDVVFEF 186
BLAST of NO18G00920 vs. NCBI_GenBank
Match: XP_002185161.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC43293.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 227.3 bits (578), Expect = 4.200e-56 Identity = 119/187 (63.64%), Postives = 148/187 (79.14%), Query Frame = 0 Query: 1 MATRKIVKPKGQEADDTDLKVASELFQLESNNPEWKADLKDLYITAAKEVDVGK-TQAIVVFVPFKLLKVYHKIQQRLVRELEKKFSGSHVVLVAQRTILGKSYGRSTKTQGVRPRSRTLSAVQDAILEDIVYPTEIVGKRTRCKVDGTKTLKVFLDNKDQMNVDYKLETFKEVYKKLTNKEVEFTF 187 M+ +KI K G E D+ + VA EL LE +P+ KA L+DLYITAAKEVDVG +AI+++VP+KL K ++K+ QRLVRELEKKFSG HV+++AQRTILGKS+ R+ KT G PRSRTL+AVQDAILEDIVYPTEI GKRTR KVDG + LKVFLD+KDQ++V+ + +TF VY KLTNK+V F F Sbjct: 1 MSAQKIRKSAGAEPDEFEASVAQELLNLEMTSPDLKASLRDLYITAAKEVDVGNGRKAIILYVPYKLRKSFNKVHQRLVRELEKKFSGRHVMIIAQRTILGKSFRRNQKTSGPLPRSRTLTAVQDAILEDIVYPTEITGKRTRVKVDGKRVLKVFLDSKDQVDVEGRTDTFAAVYGKLTNKQVSFYF 187
BLAST of NO18G00920 vs. NCBI_GenBank
Match: XP_009531565.1 (hypothetical protein PHYSODRAFT_286746 [Phytophthora sojae] >EGZ14136.1 hypothetical protein PHYSODRAFT_286746 [Phytophthora sojae]) HSP 1 Score: 226.5 bits (576), Expect = 7.200e-56 Identity = 120/183 (65.57%), Postives = 146/183 (79.78%), Query Frame = 0 Query: 5 KIVKPKGQEADDTDLKVASELFQLESNNPEWKADLKDLYITAAKEVDVGK-TQAIVVFVPFKLLKVYHKIQQRLVRELEKKFSGSHVVLVAQRTILGKSYGRSTKTQGVRPRSRTLSAVQDAILEDIVYPTEIVGKRTRCKVDGTKTLKVFLDNKDQMNVDYKLETFKEVYKKLTNKEVEFTF 187 KIVKP+GQ AD+ +L+VA EL LE + E K DLKDLYITAAK+VD+ +AIV+FVPF+L + KIQ RLVRELEKKFSG HVV++AQRTILGK Y R+ G RPRSRTL+ VQ+ IL+D+V+PTEIVGKRTRC++DG+K LKV LD KDQ+NV+ KL+TF VYKKLTNK+V F F Sbjct: 4 KIVKPEGQTADEFELQVAQELVNLEQSAAEIKNDLKDLYITAAKQVDISSGRKAIVIFVPFRLHASFKKIQARLVRELEKKFSGRHVVIIAQRTILGKGYSRANHGAGPRPRSRTLTHVQEQILDDLVFPTEIVGKRTRCRLDGSKLLKVQLDPKDQVNVETKLDTFATVYKKLTNKDVVFEF 186
BLAST of NO18G00920 vs. NCBI_GenBank
Match: XP_002899046.1 (40S ribosomal protein S7 [Phytophthora infestans T30-4] >EEY62410.1 40S ribosomal protein S7 [Phytophthora infestans T30-4]) HSP 1 Score: 226.1 bits (575), Expect = 9.400e-56 Identity = 120/183 (65.57%), Postives = 146/183 (79.78%), Query Frame = 0 Query: 5 KIVKPKGQEADDTDLKVASELFQLESNNPEWKADLKDLYITAAKEVDVGK-TQAIVVFVPFKLLKVYHKIQQRLVRELEKKFSGSHVVLVAQRTILGKSYGRSTKTQGVRPRSRTLSAVQDAILEDIVYPTEIVGKRTRCKVDGTKTLKVFLDNKDQMNVDYKLETFKEVYKKLTNKEVEFTF 187 KIVKP+GQ AD+ +L+VA EL LE + E K DLKDLYITAAK+VD+ +AIV+FVPF+L + KIQ RLVRELEKKFSG HVV++AQRTILGK Y R+ G RPRSRTL+ VQ+ IL+D+V+PTEIVGKRTRC++DG+K LKV LD KDQ+NV+ KL+TF VYKKLTNK+V F F Sbjct: 4 KIVKPEGQTADEFELQVAQELTNLEQSAAEIKNDLKDLYITAAKQVDISSGRKAIVIFVPFRLHASFKKIQARLVRELEKKFSGRHVVIIAQRTILGKGYSRANHGAGPRPRSRTLTHVQEQILDDLVFPTEIVGKRTRCRLDGSKLLKVQLDPKDQVNVETKLDTFATVYKKLTNKDVVFEF 186
BLAST of NO18G00920 vs. NCBI_GenBank
Match: EJK61079.1 (hypothetical protein THAOC_18484, partial [Thalassiosira oceanica]) HSP 1 Score: 219.2 bits (557), Expect = 1.100e-53 Identity = 113/187 (60.43%), Postives = 146/187 (78.07%), Query Frame = 0 Query: 1 MATRKIVKPKGQEADDTDLKVASELFQLESNNPEWKADLKDLYITAAKEVDVGK-TQAIVVFVPFKLLKVYHKIQQRLVRELEKKFSGSHVVLVAQRTILGKSYGRSTKTQGVRPRSRTLSAVQDAILEDIVYPTEIVGKRTRCKVDGTKTLKVFLDNKDQMNVDYKLETFKEVYKKLTNKEVEFTF 187 +A V+ E D+ + +VA EL LE + E KA L+DLYITAAKEVD G +AIV++VP+KL K + +IQ +LVRELEKKFSG HV+++A+R ILGKSY RS KT+G+RPRSRTL+AVQDAILEDIVYPTEI GKRTRCKV+G++ LKV+LD +DQ NV+ +++T+ VY KLT+K+V F F Sbjct: 30 LANMTKVRKSSGEPDEFENQVAQELLNLEMTSTELKASLRDLYITAAKEVDCGAGRKAIVLYVPYKLQKSFQRIQAKLVRELEKKFSGRHVIIIAERKILGKSYARSQKTKGLRPRSRTLTAVQDAILEDIVYPTEITGKRTRCKVEGSRLLKVYLDGRDQANVEGRIDTYASVYNKLTHKQVSFHF 216 The following BLAST results are available for this feature:
BLAST of NO18G00920 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO18G00920 ID=NO18G00920|Name=NO18G00920|organism=Nannochloropsis oceanica|type=gene|length=2292bpback to top protein sequence of NO18G00920.1 >NO18G00920.1-protein ID=NO18G00920.1-protein|Name=NO18G00920.1|organism=Nannochloropsis oceanica|type=polypeptide|length=194bpback to top Synonyms
Publications
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