NO18G00910, NO18G00910 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO18G00910 vs. NCBI_GenBank
Match: EWM23297.1 (Cytochrome c oxidase biogenesis protein Cmc1 [Nannochloropsis gaditana]) HSP 1 Score: 164.1 bits (414), Expect = 2.300e-37 Identity = 75/91 (82.42%), Postives = 87/91 (95.60%), Query Frame = 0 Query: 10 DPNYRDGSREGRLKFSKRAEQHLRDELALHARKECKDALGAFAACAKENGMFVVFKCRGLNNAMNACLSEYTSESKFEEWKKTRGMALSGE 101 DP+YRDGSREGRL+FSKRAEQHLRDELALHARK+C++ + AFAACAKENGMFV+FKCR LNNAMNACLS+YTSESKFEEWK+TRG++L+ E Sbjct: 12 DPDYRDGSREGRLRFSKRAEQHLRDELALHARKQCQEPMAAFAACAKENGMFVIFKCRALNNAMNACLSQYTSESKFEEWKQTRGLSLAEE 102
BLAST of NO18G00910 vs. NCBI_GenBank
Match: XP_005854913.1 (hypothetical protein NGA_0393000, partial [Nannochloropsis gaditana CCMP526] >EKU21457.1 hypothetical protein NGA_0393000, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 115.9 bits (289), Expect = 7.100e-23 Identity = 53/63 (84.13%), Postives = 60/63 (95.24%), Query Frame = 0 Query: 10 DPNYRDGSREGRLKFSKRAEQHLRDELALHARKECKDALGAFAACAKENGMFVVFKCRGLNNA 73 DP+YRDGSREGRL+FSKRAEQHLRDELALHARK+C++ + AFAACAKENGMFV+FKCR LNNA Sbjct: 12 DPDYRDGSREGRLRFSKRAEQHLRDELALHARKQCQEPMAAFAACAKENGMFVIFKCRALNNA 74
BLAST of NO18G00910 vs. NCBI_GenBank
Match: CBN79194.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 87.0 bits (214), Expect = 3.500e-14 Identity = 43/87 (49.43%), Postives = 57/87 (65.52%), Query Frame = 0 Query: 14 RDGSREGRLKFSKRAEQHLRDELALHARKECKDALGAFAACAKENGMFVVFKCRGLNNAMNACLSEYTSESKFEEWKKTRGMALSGE 101 +DG R RL +SKRAE LR+EL A K C D++ FAACA+E GM VVF CR N MN+CL+++T+E F+ +K R + L E Sbjct: 5 KDGGRNDRLSWSKRAEHRLREELKEIALKRCDDSVAKFAACAREKGMLVVFSCREQNALMNSCLNQHTNEESFDRYKFEREIELHRE 91
BLAST of NO18G00910 vs. NCBI_GenBank
Match: XP_008905165.1 (hypothetical protein PPTG_11755 [Phytophthora parasitica INRA-310] >ETI47379.1 hypothetical protein F443_08389 [Phytophthora parasitica P1569] >ETK87317.1 hypothetical protein L915_08221 [Phytophthora parasitica] >ETL40745.1 hypothetical protein L916_08145 [Phytophthora parasitica] >ETL93901.1 hypothetical protein L917_08043 [Phytophthora parasitica] >ETM47132.1 hypothetical protein L914_08107 [Phytophthora parasitica] >ETM47141.1 hypothetical protein L914_08106 [Phytophthora parasitica] >ETN09332.1 hypothetical protein PPTG_11755 [Phytophthora parasitica INRA-310] >ETO76100.1 hypothetical protein F444_08445 [Phytophthora parasitica P1976] >ETP17175.1 hypothetical protein F441_08371 [Phytophthora parasitica CJ01A1] >ETP45229.1 hypothetical protein F442_08327 [Phytophthora parasitica P10297] >KUF75910.1 hypothetical protein AM587_10008700 [Phytophthora nicotianae] >KUF98155.1 Vacuolar protein sorting-associated protein 27 [Phytophthora nicotianae]) HSP 1 Score: 73.2 bits (178), Expect = 5.300e-10 Identity = 35/76 (46.05%), Postives = 49/76 (64.47%), Query Frame = 0 Query: 18 REGRLKFSKRAEQHLRDELALHARKECKDALGAFAACAKENGMFVVFKCRGLNNAMNACLSEYTSESKFEEWKKTR 94 R RL +S +AE L+ EL+ A +C+ FA CAK NG+ V FKCR N A+NACL +YT++ +FE ++K R Sbjct: 15 RSSRLSWSNQAEHKLKQELSDIAIAKCRSVSEKFAECAKANGLMVAFKCRDHNKALNACLHQYTNDEQFEIYRKRR 90
BLAST of NO18G00910 vs. NCBI_GenBank
Match: POM66520.1 (Alpha-N-acetylglucosaminidase (NAGLU) [Phytophthora palmivora var. palmivora]) HSP 1 Score: 71.6 bits (174), Expect = 1.500e-9 Identity = 39/93 (41.94%), Postives = 54/93 (58.06%), Query Frame = 0 Query: 2 SSSSSTPVDPNYRDGS-REGRLKFSKRAEQHLRDELALHARKECKDALGAFAACAKENGMFVVFKCRGLNNAMNACLSEYTSESKFEEWKKTR 94 S + PVD R RL +S +AE L+ EL+ A +C FA CAK NG+ VVFKCR N A+NACL +YT++ +FE +++ R Sbjct: 759 SHNMEQPVDKETAKAKFRSSRLSWSNQAEHKLKQELSDIAISKCHSVAEKFAECAKANGLMVVFKCRDHNKALNACLHQYTNDEQFEIYRQKR 851
BLAST of NO18G00910 vs. NCBI_GenBank
Match: POM71809.1 (Alpha-N-acetylglucosaminidase (NAGLU) [Phytophthora palmivora var. palmivora]) HSP 1 Score: 71.6 bits (174), Expect = 1.500e-9 Identity = 39/93 (41.94%), Postives = 54/93 (58.06%), Query Frame = 0 Query: 2 SSSSSTPVDPNYRDGS-REGRLKFSKRAEQHLRDELALHARKECKDALGAFAACAKENGMFVVFKCRGLNNAMNACLSEYTSESKFEEWKKTR 94 S + PVD R RL +S +AE L+ EL+ A +C FA CAK NG+ VVFKCR N A+NACL +YT++ +FE +++ R Sbjct: 759 SHTMEQPVDKETAKAKFRSSRLSWSNQAEHKLKQELSDIAISKCHSVAEKFAECAKANGLMVVFKCRDHNKALNACLHQYTNDEQFEIYRQKR 851
BLAST of NO18G00910 vs. NCBI_GenBank
Match: OQR93864.1 (hypothetical protein THRCLA_08325 [Thraustotheca clavata]) HSP 1 Score: 71.2 bits (173), Expect = 2.000e-9 Identity = 39/96 (40.62%), Postives = 57/96 (59.38%), Query Frame = 0 Query: 2 SSSSSTPVDPNYRDGSREGRLKFSKRAEQHLRDELALHARKECKDALGAFAACAKENGMFVVFKCRGLNNAMNACLSEYTSESKFEEWKKTRGMAL 98 +S +TP + + R RL++S +AE L EL A K+C D AF C+ E+G+ VVFKCR N +NACL EYT+ +E++K ++ AL Sbjct: 225 NSMEATPSREDQKAEWRGSRLQWSNQAEHKLHQELNTIALKKCYDKTKAFVDCSHEHGLLVVFKCRQQNADLNACLHEYTNPEAYEKFKASKTEAL 320
BLAST of NO18G00910 vs. NCBI_GenBank
Match: EJK49979.1 (hypothetical protein THAOC_31089 [Thalassiosira oceanica]) HSP 1 Score: 68.6 bits (166), Expect = 1.300e-8 Identity = 33/78 (42.31%), Postives = 47/78 (60.26%), Query Frame = 0 Query: 14 RDGSREGRLKFSKRAEQHLRDELALHARKECKDALGAFAACAKENGMFVVFKCRGLNNAMNACLSEYTSESKFEEWKK 92 +D R+GRL F AE +R E A ++C + L AF CA++NG+ VVF+CR LN +N C+ E+ S FE + K Sbjct: 15 KDEGRDGRLSFRNFAEHKMRREFKDAAVEKCSEHLRAFGQCAQDNGLMVVFRCRELNKKINECMHEHNSHEAFERYIK 92
BLAST of NO18G00910 vs. NCBI_GenBank
Match: OQR86874.1 (hypothetical protein ACHHYP_09756 [Achlya hypogyna]) HSP 1 Score: 68.6 bits (166), Expect = 1.300e-8 Identity = 40/96 (41.67%), Postives = 54/96 (56.25%), Query Frame = 0 Query: 1 MSSSSSTPVDPNYRDGSRE---GRLKFSKRAEQHLRDELALHARKECKDALGAFAACAKENGMFVVFKCRGLNNAMNACLSEYTSESKFEEWKKTR 94 MSS ++ PN D E RL++SK+AE L EL A ++C AF C+ E+G+ VVFKCR N +NACL EYT+ F +K +R Sbjct: 1 MSSPNAAEATPNREDQKNEWRGSRLQWSKQAEHKLHQELNAIALEKCYAKTKAFVDCSHEHGLLVVFKCRQHNADLNACLHEYTNPEAFAAFKASR 96
BLAST of NO18G00910 vs. NCBI_GenBank
Match: GBG28091.1 (COX assembly mitochondrial protein-like [Aurantiochytrium sp. FCC1311]) HSP 1 Score: 68.6 bits (166), Expect = 1.300e-8 Identity = 30/64 (46.88%), Postives = 43/64 (67.19%), Query Frame = 0 Query: 30 QHLRDELALHARKECKDALGAFAACAKENGMFVVFKCRGLNNAMNACLSEYTSESKFEEWKKTR 94 Q LR AR+ CKD AF CA+E+ + V+FKCR LN AMN C+S+YTS ++EE+++ + Sbjct: 3 QRLRTIFLKEARERCKDETEAFVECAREHNLMVIFKCRHLNKAMNECVSQYTSTEQWEEYRQMK 66 The following BLAST results are available for this feature:
BLAST of NO18G00910 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 13
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO18G00910 ID=NO18G00910|Name=NO18G00910|organism=Nannochloropsis oceanica|type=gene|length=622bpback to top protein sequence of NO18G00910.1 >NO18G00910.1-protein ID=NO18G00910.1-protein|Name=NO18G00910.1|organism=Nannochloropsis oceanica|type=polypeptide|length=101bpback to top Synonyms
Publications
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