NO18G00860, NO18G00860 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO18G00860 vs. NCBI_GenBank
Match: EWM23298.1 (Protein of unknown function DUF3054 [Nannochloropsis gaditana]) HSP 1 Score: 313.5 bits (802), Expect = 7.100e-82 Identity = 177/275 (64.36%), Postives = 209/275 (76.00%), Query Frame = 0
Query: 12 QQPAVFLVLLLAIKLVAHVTHSFLLPSISS---PLLSRGAILIRPLSPSSSAVSRQGASPWALSAKKQKTLAEELDDLRLDESAMSEEEKKKLQGLRASYKLEEVLDFDGKTGEPLPAGASYTRKEDDPDYDPLDDAEDLSVAETAWSGQAGLDVLTQGNNNPTDLAARPFLALGDVAMLLLFASIGRSIHTGGISLDFQVLQTAAPFIGAWLLLAPLLGAFTPGATRSTGEAVKTVSLAWAVSVPMGLVGRGVIKGDIPPLPFMAVTMVTTWAL 284
Q + L+ LL + +F++PSI S + R + + PSSSA + A+ AL A+KQ+TLAEELDDLRLDES MS EEKK+LQGLRASYKLE+VLDFDG EPLP+ A + + DPDYDPLDDAEDL+VAETAWSGQAGLDV G NN D+ ARP LALGDV M LLFAS+GRSIHTGG+SLD QV+QTAAPFI AWL LAPLLGA+TP A+RSTG AVKTV AWA++VP GLVGRG++KG++PP+PFMAVTMVTT L
Sbjct: 6 QHNPIPLLFLLLVATSFPAVFAFVVPSIPSGRDSYILRTPMFVASKLPSSSASGSRQAAFGALLARKQRTLAEELDDLRLDESTMSAEEKKRLQGLRASYKLEDVLDFDGTNAEPLPS-APASPAQADPDYDPLDDAEDLAVAETAWSGQAGLDVRRVGENNWKDVGARPLLALGDVLMFLLFASVGRSIHTGGLSLDVQVVQTAAPFILAWLGLAPLLGAYTPEASRSTGNAVKTVLKAWALAVPGGLVGRGLLKGEVPPVPFMAVTMVTTLVL 279
BLAST of NO18G00860 vs. NCBI_GenBank
Match: XP_005854905.1 (hypothetical protein NGA_0392200, partial [Nannochloropsis gaditana CCMP526] >EKU21449.1 hypothetical protein NGA_0392200, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 312.4 bits (799), Expect = 1.600e-81 Identity = 179/274 (65.33%), Postives = 208/274 (75.91%), Query Frame = 0
Query: 10 RHQQPAVFLVLLLAIKLVAHVTHSFLLPSISSP---LLSRGAILIRPLSPSSSAVSRQGASPWALSAKKQKTLAEELDDLRLDESAMSEEEKKKLQGLRASYKLEEVLDFDGKTGEPLPAGASYTRKEDDPDYDPLDDAEDLSVAETAWSGQAGLDVLTQGNNNPTDLAARPFLALGDVAMLLLFASIGRSIHTGGISLDFQVLQTAAPFIGAWLLLAPLLGAFTPGATRSTGEAVKTVSLAWAVSVPMGLVGRGVIKGDIPPLPFMAVTMVTT 281
+ P L LLLA V +F+ PSI S + R + + PSSSA + A+ AL A+KQ+TLAEELDDLRLDES MS EEKK+LQGLRASYKLE+VLDFDG EPLP+ A + + DPDYDPLDDAEDL+VAETAWSGQAGLDV G NN D+ ARP LALGDV M LLFAS+GRSIHTGG+SLD QV+QTAAPFI AWL LAPLLGA+TP A+RSTG AVKTV AWA++VP GLVGRG++KG++PP+PFMAVTMVTT
Sbjct: 5 KQHNPIPLLFLLLAATSFPAV-FAFVAPSIPSGRDFYILRTPMFVASKLPSSSASGSRQAAFGALLARKQRTLAEELDDLRLDESTMSAEEKKRLQGLRASYKLEDVLDFDGTNAEPLPS-APASPAQADPDYDPLDDAEDLAVAETAWSGQAGLDVRRVGENNWKDVGARPLLALGDVLMFLLFASVGRSIHTGGLSLDVQVVQTAAPFILAWLGLAPLLGAYTPEASRSTGNAVKTVLKAWALAVPGGLVGRGLLKGEVPPVPFMAVTMVTT 276
BLAST of NO18G00860 vs. NCBI_GenBank
Match: XP_005717989.1 (unnamed protein product [Chondrus crispus] >CDF38120.1 unnamed protein product [Chondrus crispus]) HSP 1 Score: 124.0 bits (310), Expect = 8.000e-25 Identity = 68/137 (49.64%), Postives = 92/137 (67.15%), Query Frame = 0
Query: 148 LSVAETAWSGQAGLDVL-TQGNNNPTDLAARPFLALGDVAMLLLFASIGRSIHTGGISLDFQVLQTAAPFIGAWLLLAPLLGAFTPGATRSTGEAVKTVSLAWAVSVPMGLVGRGVIKGDIPPLPFMAVTMVTTWAL 284
L+ + WSGQAG+D + G +N +DL R LALGD A LLFA IG++ H G SL+F V+QTA PFI AWL +PLLGA+T AT + VKT + +WA++VPMG+ RGV+ +PP F VT+V+T+A+
Sbjct: 333 LTNEDVNWSGQAGVDTPGSSGTSNYSDLGKRLDLALGDTAAFLLFAYIGKASH-GDKSLNFGVVQTATPFIVAWLATSPLLGAYTRAATANVAATVKTFAKSWAIAVPMGIGLRGVLTDHVPPAVFAVVTLVSTFAI 468
BLAST of NO18G00860 vs. NCBI_GenBank
Match: CBN76030.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 118.6 bits (296), Expect = 3.400e-23 Identity = 75/197 (38.07%), Postives = 110/197 (55.84%), Query Frame = 0
Query: 90 ESAMSEEEKKKLQGLRA-SYKLEEVLDFDGKTGEPLPAGASYTRKEDDPDYDPLDDAEDLSVAETAWSGQAGLDV--LTQGNNNPTDLAARPFLALGDVAMLLLFASIGRSIHTGGISLDFQVLQTAAPFIGAWLLLAPLLGAFTPGATRSTGEAVKTVSLAWAVSVPMGLVGRGVIK-GDIPPLPFMAVTMVTTWA 283
+ M+ EE+++ +GL + L EV + G + D +DL V +TAW GQAGLDV G+ + +DL+AR LA+GD L +FA +GR+ H G S D VL TA PF+ WL ++PLLGA+T AT + G A K + AW +S+P+G+ R + K G++PP+PF +M+ T A
Sbjct: 144 DDGMTAEERQRAEGLASIERSLAEVTAIQRQLGISV---------------DEXXXXKDLEVTDTAWRGQAGLDVTDAADGSRDWSDLSARKGLAVGDAVALTMFAYVGRASH-GMASFDLGVLLTALPFLIGWLAVSPLLGAYTRSATETPGGAAKALLPAWGISIPVGIFLRALSKGGEVPPVPFAVTSMIFTLA 324
BLAST of NO18G00860 vs. NCBI_GenBank
Match: OSX76712.1 (hypothetical protein BU14_0178s0028 [Porphyra umbilicalis]) HSP 1 Score: 104.8 bits (260), Expect = 5.000e-19 Identity = 63/141 (44.68%), Postives = 83/141 (58.87%), Query Frame = 0
Query: 144 DAEDLSVAETAWSGQAGLDVLT-QGNNNPTDLAARPFLALGDVAMLLLFASIGRSIHTGGISLDFQVLQTAAPFIGAWLLLAPLLGAFTPGATRSTGEAVKTVSLAWAVSVPMGLVGRGVIKGDIPPLPFMAVTMVTTWAL 284
D+ L+ + WSGQAG+DV T + D+AA P LA GDVA+ L FA+IG + H + V TAAPFI AWL +APL+GA+T A + A T + AW V VP GL RGV+ +PP F VT+++T L
Sbjct: 261 DSGVLTNDKVNWSGQAGVDVNTPAAPPSYADMAAHPLLAAGDVAVFLAFATIGAASHAANAN-PLSVTLTAAPFIVAWLAVAPLMGAYTRRAVGTYQGAAVTTARAWLVGVPSGLALRGVVTSHLPPPSFAVVTLLSTAVL 400
BLAST of NO18G00860 vs. NCBI_GenBank
Match: GAX73629.1 (hypothetical protein CEUSTIGMA_g1080.t1 [Chlamydomonas eustigma]) HSP 1 Score: 97.8 bits (242), Expect = 6.200e-17 Identity = 58/148 (39.19%), Postives = 79/148 (53.38%), Query Frame = 0
Query: 137 PDYDPLDDAEDLSVAETAWSGQAGLDVLTQGNNNPTDLAARPFLALGDVAMLLLFASIGRSIHTGGISLDFQVLQTAAPFIGAWLLLAPLLGAFTPGAT-RSTGEAVKTVSLAWAVSVPMGLVGRGVIKGDIPPLPFMAVTMVTTWAL 284
P PL + AW+G A +D + LA GD+ +L FA++GR I+ GG++ D + + TA PF+ W L +P LG F P A T +A T + WAV P+GLV RGV KG +PP PF+ V+MVTT L
Sbjct: 8 PGGQPLKVVSVEKAGDEAWAGVAAID----RGEETASTSKLALLAAGDLVAILAFAAVGR-INHGGVA-DLETIYTALPFLAGWFLTSPFLGGFGPSANGTGTKDAALTAAKCWAVGTPLGLVIRGVSKGYVPPTPFIVVSMVTTGVL 149
BLAST of NO18G00860 vs. NCBI_GenBank
Match: CEM05849.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 97.4 bits (241), Expect = 8.100e-17 Identity = 58/140 (41.43%), Postives = 80/140 (57.14%), Query Frame = 0
Query: 143 DDAEDLSVAETAWSGQAGLDVLTQGNNNPTDLAARPFLALGDVAMLLLFASIGRSIHTG--GISLDFQVLQTAAPFIGAWLLLAPLLGAFTPGATRSTGEAVKTVSLAWAVSVPMGLVGRGVIKGDIPPLPFMAVTMVTT 281
D ++ + T W+GQAGL+V G +N D+ R LA GD LL FA GR+ H L V QTAAPF+ AW ++PLLGA+T AT + + + + AWAVS MGL R V +G+ PP F+ +++V T
Sbjct: 104 DVVDERDIERTQWTGQAGLEVRRVGKSNWMDIPDRWLLASGDAVALLAFALAGRANHGAQQETILSPGVWQTAAPFLIAWFGISPLLGAYTHDATANYKKMAQVLIPAWAVSASMGLALRAVYRGEQPPGVFVVISLVAT 243
BLAST of NO18G00860 vs. NCBI_GenBank
Match: XP_001693458.1 (predicted protein [Chlamydomonas reinhardtii]) HSP 1 Score: 96.7 bits (239), Expect = 1.400e-16 Identity = 63/148 (42.57%), Postives = 80/148 (54.05%), Query Frame = 0
Query: 137 PDYDPLDDAEDLSVAETAWSGQAGLDVLTQGNNNPTDLAARPFLALGDVAMLLLFASIGRSIHTGGISLDFQVLQTAAPFIGAWLLLAPLLGAFTPGA-TRSTGEAVKTVSLAWAVSVPMGLVGRGVIKGDIPPLPFMAVTMVTTWAL 284
PD PL+ S E AW+G A +D +G ++ DL + LA GD LLLFA+ GRS H G + L TA PFI W AP LG F A + A T + WAV VP+GLV RG+ +G +PP PF+AV+M T L
Sbjct: 4 PDGQPLEVVPVESTGEDAWAGVARVD---RGGSSAFDLQSALLLAAGDAVALLLFAAAGRSNH-GEATQVADALGTALPFIIGWFATAPFLGGFGADARKKGVPTAAATAAKCWAVGVPLGLVIRGLSRGYVPPTPFIAVSMGVTAVL 147
BLAST of NO18G00860 vs. NCBI_GenBank
Match: PNW73705.1 (hypothetical protein CHLRE_13g569250v5 [Chlamydomonas reinhardtii]) HSP 1 Score: 96.7 bits (239), Expect = 1.400e-16 Identity = 63/148 (42.57%), Postives = 80/148 (54.05%), Query Frame = 0
Query: 137 PDYDPLDDAEDLSVAETAWSGQAGLDVLTQGNNNPTDLAARPFLALGDVAMLLLFASIGRSIHTGGISLDFQVLQTAAPFIGAWLLLAPLLGAFTPGA-TRSTGEAVKTVSLAWAVSVPMGLVGRGVIKGDIPPLPFMAVTMVTTWAL 284
PD PL+ S E AW+G A +D +G ++ DL + LA GD LLLFA+ GRS H G + L TA PFI W AP LG F A + A T + WAV VP+GLV RG+ +G +PP PF+AV+M T L
Sbjct: 99 PDGQPLEVVPVESTGEDAWAGVARVD---RGGSSAFDLQSALLLAAGDAVALLLFAAAGRSNH-GEATQVADALGTALPFIIGWFATAPFLGGFGADARKKGVPTAAATAAKCWAVGVPLGLVIRGLSRGYVPPTPFIAVSMGVTAVL 242
BLAST of NO18G00860 vs. NCBI_GenBank
Match: GAQ80398.1 (hypothetical protein KFL_000530250 [Klebsormidium nitens]) HSP 1 Score: 95.1 bits (235), Expect = 4.000e-16 Identity = 54/125 (43.20%), Postives = 76/125 (60.80%), Query Frame = 0
Query: 160 GLDVLTQGNNNPTDLAARPFLALGDVAMLLLFASIGRSIHTGGISLDFQVLQTAAPFIGAWLLLAPLLGAFTPGATRSTG-EAVKTVSLAWAVSVPMGLVGRGVIKGDIPPLPFMAVTMVTTWAL 284
G+ + +G +N +L L GD LLLFA G+ H+G + DF V+ TAAPF+ W A LLG + AT S +AV T +AWAV +P+G+V RGV+KG +PP PF+ VT+ +T+ L
Sbjct: 51 GVAKIDRGEDN-MNLGRLALLVAGDTVALLLFALAGKVSHSG--TADFGVVPTAAPFLVGWFASATLLGGYGADATLSGPLKAVTTTGIAWAVGIPLGIVIRGVLKGQVPPTPFILVTLASTFVL 172 The following BLAST results are available for this feature:
BLAST of NO18G00860 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO18G00860 ID=NO18G00860|Name=NO18G00860|organism=Nannochloropsis oceanica|type=gene|length=2044bpback to top protein sequence of NO18G00860.1 >NO18G00860.1-protein ID=NO18G00860.1-protein|Name=NO18G00860.1|organism=Nannochloropsis oceanica|type=polypeptide|length=310bpback to top Synonyms
Publications
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