NO18G00830, NO18G00830 (gene) Nannochloropsis oceanica

Overview
NameNO18G00830
Unique NameNO18G00830
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1581
Alignment locationchr18:316625..318205 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr18genomechr18:316625..318205 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO18G00830 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL008nonsL008Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR064ncniR064Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR043ngnoR043Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO18G00830.1NO18G00830.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO18G00830.1NO18G00830.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO18G00830 ID=NO18G00830|Name=NO18G00830|organism=Nannochloropsis oceanica|type=gene|length=1581bp
TAGTAATTGATGATTGCCTGGTGTTTTTTTGGCATTTTTTCAACACAAGG
TACGTGCCCTTGGCCCATCGTAAGTGCCCTGTGGCCCATCGTGTCTTTTC
TATAGTAGCGACCCGCAAAAACAAAATATAGGTTCTTGCCAGGCTAGTCC
TTTACCCCGCTTGTCTTGTCGACAGATTTCTCTCTCGGGGGTCAAGCAGG
TCTCGAACCATCACACCAAGAACAACAACAACAAATTATTGTTCACTGCA
GCGGACCTGCTCGATGAATGCGTCTATGAAATGCCCTATGACATACCAAT
AAACAAGAGATATGCTTCAAATAAACAAATCAAGGGATTGCTGGCAGATT
CACACACTCCCTAGGCGTCCCTCCAACGGATCCATAGCCTCCCAAGATCA
AGAAACACCTGACTGGTAAAGACGACAAACATCCAATTCTTACGAGTCCC
CCCCCTTTGACCGTAGGTCAACCTTGGCTTACAAGCCCCCCGAGTGAAGA
GTGATGGAAATGGCTGTCGATGTGGATGCCATTTGTGAAGGGGTGATTGT
GATGTGTTTAATCTCTCATGCTTCCTATAAACTTATGTTCCTGATGAATG
TTGATAGATAGAGTAGTGTCCTTACATGTAGGAACGCTGCGGAAGGAAGg
taaggaggggggggggggggaggaggaggaactgagggaggctgacatgg
tcgtatttctcactgagtcctcggtaaaacaaaattttcctccctcctcc
cctccatccctccctccttccttccttcagGCTACGCGGATCACCTGGAC
AACCTCAACAGCAACGGCAGCACGGCCCTCTGCTGGGGCTCATTTTGCGG
TCATACGCACGTAACTCGCCTGCTCCAGATGGTCGgtacgtcccccctcc
ctccctcccgccctccctcggtatatgtctggcaccctgcctctggagtc
cttgcatccctccctccctccctccctccctacccccctccctccaccct
tctacccccgtcattcgaaaaattccatcccaagcgtttcaacacaccac
attcccttctgtctgtccctctctccctcccttatgcaggcactaatccc
gccatcgccaataatgacggtcgcggccctctcgtctaagCCCAGAATGT
GGGCACCAGGGCTGCACCGAGCTGCTCCAGgtaagtcctccttccctccc
tccctccctctctctctcttttcctcactacaatctttccatttaatccc
gccacgccctccctccccttttccttccccccctccctccgatcttcatt
gtgtcccaatcctccctcccccccttcctcttttcccctctcctcccctc
cctctctctttcattctaccccttccctccctccctccctctttccgtcc
ttccagGTCTTCCTCCTCGAGCCCACATGCACGTTCCTCCTCCATAAACT
CCGAGCTCCGAGCTATCGGTAATGTCCGACACGCATACCAACGGGATTCA
TCCCCCAGCTACCATCACCACCACCACCACCACCCAGCAGCAACAACAAC
ACCAACAGGAACAGTAGCAGCCCGGGGATAA
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protein sequence of NO18G00830.1

>NO18G00830.1-protein ID=NO18G00830.1-protein|Name=NO18G00830.1|organism=Nannochloropsis oceanica|type=polypeptide|length=124bp
MLIDRVVSLHVGTLRKEGYADHLDNLNSNGSTALCWGSFCGHTHVTRLLQ
MVAQNVGTRAAPSCSRSSSSSPHARSSSINSELRAIGNVRHAYQRDSSPS
YHHHHHHHPAATTTPTGTVAARG*
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Synonyms
Publications