NO18G00690, NO18G00690 (gene) Nannochloropsis oceanica

Overview
NameNO18G00690
Unique NameNO18G00690
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length823
Alignment locationchr18:281701..282523 +

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Properties
Property NameValue
DescriptionFun14 family protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr18genomechr18:281701..282523 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR007014FUN14
Homology
BLAST of NO18G00690 vs. NCBI_GenBank
Match: XP_002897898.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY64698.1 conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 90.9 bits (224), Expect = 5.500e-15
Identity = 44/136 (32.35%), Postives = 83/136 (61.03%), Query Frame = 0
Query:   87 APSHRPVSSYPPNPNNGDDDEEVEGILSRALGPLGGEITLSGALGFGAGYSLKKISKAAAFFIGIAFVASQIFGHLGYVEVNWRKVEREVMRLFDLDGDQRLTTRDVAMYWKKLKGMLMHKLPNTTAFAAFFTLGL 223
            A +  P     P  NN   ++ ++ +LS       GE+TL+G LGF +GY+L ++ KAAA  +GI F+ +Q   + GY+++ W KV+++++   D +GD ++ + DV ++++KL  ++   LP++  F++ F LG+
Sbjct:   78 AAAEGPSGGGVPKKNNNPVEKIIDVVLSNC-----GELTLAGGLGFCSGYALNQVGKAAAMAVGIVFIIAQTAAYNGYIDIKWGKVQKDMIAKVDPNGDGKIDSEDVKLWYRKLLKIMKTNLPSSAGFSSGFALGI 208          
BLAST of NO18G00690 vs. NCBI_GenBank
Match: XP_008609583.1 (hypothetical protein SDRG_05635 [Saprolegnia diclina VS20] >EQC36802.1 hypothetical protein SDRG_05635 [Saprolegnia diclina VS20])

HSP 1 Score: 89.0 bits (219), Expect = 2.100e-14
Identity = 59/193 (30.57%), Postives = 97/193 (50.26%), Query Frame = 0
Query:   37 IATTTTLTFKRGSRLLAICTFIAAANQDLKALSYSPSFCQPASSSSNSSTAPSHRPVSSYPPNPNNGD-------DDEEVEGILSRALGPLGGEITLSGALGFGAGYSLKKISKAAAFFIGIAFVASQIFGHLGYVEVNWRKVEREVMRLFDLDGDQRLTTRDVAMYWKKLKGMLMHKLPNTTAFAAFFTLGL 223
            + + T    KR S + A+ T  A +N  LK             +    + + SH  V     +   GD       DD+ V  ++ +  G   GE++  G +GF +G ++K++ KAAA  IGI FV +Q+  H GY+ +NW KVE++ +   D DGD ++T +D  ++WK+      +  P+++ FAA F  GL
Sbjct:    6 VRSQTRTLAKRTSFVRALATRSARSNVALKFDGRKAVVRLSGMAMLGMAMSLSHNAVLCQAADGKEGDAKGSVSKDDDPVSRLIDQ-FGAKIGEVSFGGFVGFCSGMAVKQVGKAAAVSIGIIFVMAQVAAHKGYININWGKVEKDAIAAVDPDGDGKITQKDFKIWWKRFLEFAQYNFPSSSGFAAGFAAGL 197          
BLAST of NO18G00690 vs. NCBI_GenBank
Match: OQS04845.1 (hypothetical protein THRCLA_02947 [Thraustotheca clavata])

HSP 1 Score: 87.8 bits (216), Expect = 4.700e-14
Identity = 40/112 (35.71%), Postives = 65/112 (58.04%), Query Frame = 0
Query:  101 NNGDDDEEVEGILSRALGPLGGEITLSGALGFGAGYSLKKISKAAAFFIGIAFVASQIFGHLGYVEVNWRKVEREVMRLFDLDGDQRLTTRDVAMYWKKLKGMLMHKLPNTT 213
            NN   D++    L    G   GEI+  G LGF +G ++K++ KAAAF IG  FV +Q+    GY+ +NW KVE++ +   D DGD ++T +D  ++WK+      +  P+++
Sbjct:   76 NNSSKDDDAVSRLIEQFGSKIGEISFGGFLGFCSGVAIKQVGKAAAFGIGALFVLAQVAASKGYININWSKVEKDAIAAVDPDGDGKITPKDFKIWWKRFLEFAQYNFPSSS 187          
BLAST of NO18G00690 vs. NCBI_GenBank
Match: XP_012196504.1 (hypothetical protein SPRG_02543 [Saprolegnia parasitica CBS 223.65] >KDO32851.1 hypothetical protein SPRG_02543 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 86.7 bits (213), Expect = 1.000e-13
Identity = 58/193 (30.05%), Postives = 95/193 (49.22%), Query Frame = 0
Query:   37 IATTTTLTFKRGSRLLAICTFIAAANQDLKALSYSPSFCQPASSSSNSSTAPSHRPVSSYPPNPNNGD-------DDEEVEGILSRALGPLGGEITLSGALGFGAGYSLKKISKAAAFFIGIAFVASQIFGHLGYVEVNWRKVEREVMRLFDLDGDQRLTTRDVAMYWKKLKGMLMHKLPNTTAFAAFFTLGL 223
            + + T    KR S +  + T  A +N  LK             +    + + SH  V     +   GD       DD+ V  ++ +  G   GE++  G LGF +G ++K+I KA A  IGI FV +Q+  H GY+ +NW KVE++ +   D DGD ++T +D  ++WK+      +  P+++ FAA F  G+
Sbjct:    6 VRSQTRALAKRSSFVRTLATRSARSNVALKFDGRKAVVRLSGMAMLGMAMSLSHNAVLCQAADGKEGDAKGSVSKDDDPVSRLIDQ-FGAKIGEVSFGGFLGFCSGAAVKQIGKATAVSIGIIFVMAQVAAHKGYININWGKVEKDAIAAVDPDGDGKITQKDFKIWWKRFLEFAQYNFPSSSGFAAGFAAGV 197          
BLAST of NO18G00690 vs. NCBI_GenBank
Match: CBN78386.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 83.2 bits (204), Expect = 1.100e-12
Identity = 40/101 (39.60%), Postives = 55/101 (54.46%), Query Frame = 0
Query:  122 GEITLSGALGFGAGYSLKKISKAAAFFIGIAFVASQIFGHLGYVEVNWRKVEREVMRLFDLDGDQRLTTRDVAMYWKKLKGMLMHKLPNTTAFAAFFTLGL 223
            GE+   G +GF +GY++ K+ KA AF IG+ F+  Q   + G V + W K E +V  LFD + D ++   D    WK+LK  L H LP    F   F LGL
Sbjct:  107 GEVGFGGVVGFCSGYAMMKVGKAIAFVIGVGFIVVQGLNYSGVVTIKWEKAEVKVKSLFDSNKDGKVDKEDAKALWKRLKTALTHNLPAGGGFTGGFALGL 207          
BLAST of NO18G00690 vs. NCBI_GenBank
Match: XP_002178740.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC49438.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 82.8 bits (203), Expect = 1.500e-12
Identity = 37/122 (30.33%), Postives = 70/122 (57.38%), Query Frame = 0
Query:  104 DDDEEVEGILSRALGPLGGEITLSGALGFGAGYSLKKISKAAAFFIGIAFVASQIFGHLGYVEVNWRKVEREVMRLFDLDGDQRLTTRDVAMYWKKLKGMLMHKLPNTTAFAAFFTLGLQKG 226
            + ++ +E I+ +A  P+ G +T    +G+ +G +L+K+ KA A  +GI FV  Q    +GY+ V+W K+   V+   D + D   T  D  ++W+K K +++H++P+   F+  F  G++ G
Sbjct:    3 EKNDVIEDIIEKA-KPIFGNMTFGAVMGYCSGIALQKVGKALAVIVGIGFVGLQTAASMGYIVVDWEKIRVSVVSSIDQNKDGFFTADDAKIFWQKFKKLMVHRVPSAGGFSLGFLYGVRSG 123          
BLAST of NO18G00690 vs. NCBI_GenBank
Match: GBG30486.1 (FUN14 domain-containing protein 1 [Aurantiochytrium sp. FCC1311])

HSP 1 Score: 82.8 bits (203), Expect = 1.500e-12
Identity = 40/118 (33.90%), Postives = 66/118 (55.93%), Query Frame = 0
Query:  106 DEEVEGILSRALGPLGGEITLSGALGFGAGYSLKKISKAAAFFIGIAFVASQIFGHLGYVEVNWRKVEREVMRLFDLDGDQRLTTRDVAMYWKKLKGMLMHKLPNTTAFAAFFTLGLQ 224
            D+ +  ++S  LGP+   +   GALGF  GY++K+ SK  A  +G+ FV  Q   + GY+EV W K+  ++++  D DG   +TTRD+  Y  K+ G+L    P+   F++    G +
Sbjct:   41 DKALVDVISGTLGPVLTRLGFGGALGFCTGYAIKQASKVVATALGVGFVCLQGMQYAGYIEVRWDKIRGDLIKRVDTDGSGTVTTRDIKYYVTKVFGILKFHGPHAAGFSSGLVYGFR 158          
BLAST of NO18G00690 vs. NCBI_GenBank
Match: XP_012210533.1 (hypothetical protein SPRG_15943 [Saprolegnia parasitica CBS 223.65] >KDO18755.1 hypothetical protein SPRG_15943 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 82.0 bits (201), Expect = 2.600e-12
Identity = 37/105 (35.24%), Postives = 67/105 (63.81%), Query Frame = 0
Query:  121 GGEITLSGALGFGAGYSLKKISKAAAFFIGIAFVASQIFGHLGYVEVNWRKVEREVMRLFDLDGDQRLTTRDVAMYWKKLKGMLMHKLPNTTAFAAFFTLGLQKG 226
            GG+I+    +G  +G++LKK+SK  A  +G AF+A Q   + GY++VN++K+ER++  + D++ D +   +DV + +KK+  +L   LP  + +AA F +G + G
Sbjct:  129 GGQISWGFMMGACSGFALKKVSKVGAVMLGCAFMAMQCASYYGYLDVNYKKLERDITDMLDINKDGKFDAKDVQVMYKKMMDILEFSLPAGSGYAAGFLVGFRSG 233          
BLAST of NO18G00690 vs. NCBI_GenBank
Match: OQR95574.1 (hypothetical protein THRCLA_07750 [Thraustotheca clavata])

HSP 1 Score: 82.0 bits (201), Expect = 2.600e-12
Identity = 38/105 (36.19%), Postives = 66/105 (62.86%), Query Frame = 0
Query:  121 GGEITLSGALGFGAGYSLKKISKAAAFFIGIAFVASQIFGHLGYVEVNWRKVEREVMRLFDLDGDQRLTTRDVAMYWKKLKGMLMHKLPNTTAFAAFFTLGLQKG 226
            GG+I+    +G  +GY++KK+SK  A  +G  F+A Q   + GY++VN++K+ER+   + DL+ D ++ T+D+ + +KK   +L   LP  + FAA F +G + G
Sbjct:  131 GGQISWGFMMGACSGYAMKKVSKIGAIVLGCTFMAMQTASYYGYLDVNYKKLERDFHEMLDLNKDGKVDTKDMDLLYKKTMDVLEFSLPAGSGFAAGFLIGFRSG 235          
BLAST of NO18G00690 vs. NCBI_GenBank
Match: OQR99714.1 (hypothetical protein ACHHYP_04872 [Achlya hypogyna])

HSP 1 Score: 82.0 bits (201), Expect = 2.600e-12
Identity = 37/105 (35.24%), Postives = 66/105 (62.86%), Query Frame = 0
Query:  121 GGEITLSGALGFGAGYSLKKISKAAAFFIGIAFVASQIFGHLGYVEVNWRKVEREVMRLFDLDGDQRLTTRDVAMYWKKLKGMLMHKLPNTTAFAAFFTLGLQKG 226
            GG+I+    +G  +G++LKK+SK  A  IG AF+A Q   + GY++VN++K+ER++  + D + D +  ++D+   +KK+  +L   LP  + +AA F +G + G
Sbjct:  133 GGQISWGFMMGACSGFALKKVSKVGAVMIGCAFMAMQTASYYGYLDVNYKKLERDITDMLDFNKDGKFDSKDIEAMYKKMMNVLEFSLPAGSGYAAGFLIGFRSG 237          
The following BLAST results are available for this feature:
BLAST of NO18G00690 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_002897898.15.500e-1532.35conserved hypothetical protein [Phytophthora infes... [more]
XP_008609583.12.100e-1430.57hypothetical protein SDRG_05635 [Saprolegnia dicli... [more]
OQS04845.14.700e-1435.71hypothetical protein THRCLA_02947 [Thraustotheca c... [more]
XP_012196504.11.000e-1330.05hypothetical protein SPRG_02543 [Saprolegnia paras... [more]
CBN78386.11.100e-1239.60conserved unknown protein [Ectocarpus siliculosus][more]
XP_002178740.11.500e-1230.33predicted protein [Phaeodactylum tricornutum CCAP ... [more]
GBG30486.11.500e-1233.90FUN14 domain-containing protein 1 [Aurantiochytriu... [more]
XP_012210533.12.600e-1235.24hypothetical protein SPRG_15943 [Saprolegnia paras... [more]
OQR95574.12.600e-1236.19hypothetical protein THRCLA_07750 [Thraustotheca c... [more]
OQR99714.12.600e-1235.24hypothetical protein ACHHYP_04872 [Achlya hypogyna... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL008nonsL008Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR064ncniR064Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR043ngnoR043Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003924NSK003924Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO18G00690.1NO18G00690.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|609213gene_9580Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100181g3gene7171Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO18G00690.1NO18G00690.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO18G00690 ID=NO18G00690|Name=NO18G00690|organism=Nannochloropsis oceanica|type=gene|length=823bp
ACACCCACAGAAGCCTTGCACATCCACATAATACACAAGTCTTCATTAAA
GATATCACGGCTCTTTTTTTGTCGTAGCACGCACTGCCTGTTCACTCTCC
CGCAAAACCATCATGATCGAGAGCCTGCTTCGAGCTCGCCCTCAAAACCG
GACCAGCACCACAGCCTTTATCAATCGTTTTATCGCCCTACCACAACAAA
GCTGCCCTGGCGCCCTAAGTATAGCGACCACAACCACACTGACATTCAAG
CGCGGCTCGCGGCTTCTAGCAATATGTACTTTTATCGCGGCTGCTAATCA
AGACCTCAAAGCCCTCTCTTATTCCCCATCTTTCTGCCAACCTGCCTCTT
CCTCCTCCAATTCCAGCACAGCCCCCAGTCATCGTCCCGTCTCCTCCTAC
CCTCCCAACCCTAACAATGGTGACGACGACGAGGAAGTAGAAGGCATCTT
ATCTCGTGCTCTTGGCCCGTTGGGAGGGGAGATAACATTAAGTGGTGCCT
TGGGGTTTGGTGCCGGGTACTCTCTGAAGAAAATAAGCAAGGCGGCCGCA
TTTTTCATTGGAATTGCGTTTGTGGCATCGCAAATATTTGGTCATTTGGG
GTATGTGGAGGTAAATTGGCGGAAGGTTGAGAGGGAGGTAATGCGGTTAT
TCGATTTGGATGGCGATCAGAGATTGACGACAAGGGACGTGGCGATGTAT
TGGAAAAAGTTGAAGGGGATGTTGATGCATAAGCTACCAAACACGACGGC
GTTCGCGGCATTTTTTACCTTAGGGCTGCAGAAGGGTTAGGGTCTGGAAT
ATGAAGGGAGGGGCGGGAGGGAG
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protein sequence of NO18G00690.1

>NO18G00690.1-protein ID=NO18G00690.1-protein|Name=NO18G00690.1|organism=Nannochloropsis oceanica|type=polypeptide|length=226bp
MIESLLRARPQNRTSTTAFINRFIALPQQSCPGALSIATTTTLTFKRGSR
LLAICTFIAAANQDLKALSYSPSFCQPASSSSNSSTAPSHRPVSSYPPNP
NNGDDDEEVEGILSRALGPLGGEITLSGALGFGAGYSLKKISKAAAFFIG
IAFVASQIFGHLGYVEVNWRKVEREVMRLFDLDGDQRLTTRDVAMYWKKL
KGMLMHKLPNTTAFAAFFTLGLQKG*
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Synonyms
Publications