NO18G00690, NO18G00690 (gene) Nannochloropsis oceanica

Overview
NameNO18G00690
Unique NameNO18G00690
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length823
Alignment locationchr18:281701..282523 +

Link to JBrowse

Properties
Property NameValue
DescriptionFun14 family protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr18genomechr18:281701..282523 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR007014FUN14
Homology
[Close]
BLAST of NO18G00690 vs. NCBI_GenBank
Match: EWM23280.1 (fun14 family protein [Nannochloropsis gaditana])

HSP 1 Score: 188.0 bits (476), Expect = 3.300e-44
Identity = 105/223 (47.09%), Postives = 142/223 (63.68%), Query Frame = 0 
Query:    5 LLRARPQNRTSTTAFINRFIALPQQSCPGALSIATT-TTLTFKRGSRLLAICTFIAAANQDLKALSYSPSFCQPASSSSNSSTAPS-HRPVSSYPPNPNNGDDDEEVEGILSRALGPLGGEITLSGALGFGAGYSLKKISKAAAFFIGIAFVASQIFGHLGYVEVNWRKVEREVMRLFDLDGDQRLTTRDVAMYWKKLKGMLMHKLPNTTAFAAFFTLGLQKG 226
            +LR    +    T+ +   +     S P  L++ +T   LT +RGSR LA  +F+A+  QDL+ LS S S+C PAS      + PS H     Y     +  D ++    + +ALG +GGEIT +GALGFGAGY+LKKI K AA F+G+AF+ASQ  G +GYVEVNW+K+E EV++  DLDGD +LT +DVA+YW K+K +LMH LP+T  F A F LGLQKG
Sbjct:    1 MLRPCSLSHPGPTSLVQNHLLPQTCSRPTRLTLTSTKRVLTLRRGSRFLAFLSFVASTTQDLRRLS-SSSYCSPASRRRPLPSFPSTHLRKEEYNTRRKDSGDGDD---FIPKALGSIGGEITFNGALGFGAGYTLKKIGKMAAIFLGVAFIASQSLGRMGYVEVNWKKIEGEVLKFLDLDGDDKLTVKDVALYWDKMKRVLMHNLPSTATFTAMFVLGLQKG 219
[Close]
BLAST of NO18G00690 vs. NCBI_GenBank
Match: GAX96212.1 (Hypothetical protein PINS_004106 [Pythium insidiosum])

HSP 1 Score: 99.8 bits (247), Expect = 1.200e-17
Identity = 45/116 (38.79%), Postives = 79/116 (68.10%), Query Frame = 0 
Query:  107 EEVEGILSRALGPLGGEITLSGALGFGAGYSLKKISKAAAFFIGIAFVASQIFGHLGYVEVNWRKVEREVMRLFDLDGDQRLTTRDVAMYWKKLKGMLMHKLPNTTAFAAFFTLGL 223
            +EV+ ++ + +G   GEI+++G LGF +GY+LK++ K AA  IG  FV +Q+    GY+ +NW+KVE++V++  D DGD ++T +D+ +++++   ML   LP++  FA  F LG+
Sbjct:  262 DEVDKLIDQLMGRC-GEISMAGGLGFCSGYALKQVGKVAAVTIGTLFVIAQVAQSKGYIHINWQKVEKDVVQAVDPDGDGKITKKDLQIWYQRFMAMLQANLPSSAGFAGGFLLGV 376
[Close]
BLAST of NO18G00690 vs. NCBI_GenBank
Match: XP_008862380.1 (hypothetical protein H310_01127 [Aphanomyces invadans] >ETW08575.1 hypothetical protein H310_01127 [Aphanomyces invadans])

HSP 1 Score: 96.7 bits (239), Expect = 1.000e-16
Identity = 45/121 (37.19%), Postives = 76/121 (62.81%), Query Frame = 0 
Query:  102 NGDDDEEVEGILSRALGPLGGEITLSGALGFGAGYSLKKISKAAAFFIGIAFVASQIFGHLGYVEVNWRKVEREVMRLFDLDGDQRLTTRDVAMYWKKLKGMLMHKLPNTTAFAAFFTLGL 223
            NG  D+ V  ++ +  G + G+++  GA+GF AG ++K I K AA  IG+ FV +Q+    GY++++W+KVE++ +   D +GD ++T  D  ++WKK   +  H LP++  FAA F LG+
Sbjct:   81 NGKKDDPVSRLIDQYGGSI-GQVSFGGAVGFCAGMAVKSIGKIAAVAIGVVFVGAQMAESAGYIQIDWKKVEKDAIAAVDPNGDGKITPDDFKIWWKKFLALSKHNLPSSGGFAAGFALGI 200
[Close]
BLAST of NO18G00690 vs. NCBI_GenBank
Match: XP_009821803.1 (hypothetical protein H257_00695 [Aphanomyces astaci] >ETV89403.1 hypothetical protein H257_00695 [Aphanomyces astaci])

HSP 1 Score: 95.5 bits (236), Expect = 2.200e-16
Identity = 43/117 (36.75%), Postives = 74/117 (63.25%), Query Frame = 0 
Query:  106 DEEVEGILSRALGPLGGEITLSGALGFGAGYSLKKISKAAAFFIGIAFVASQIFGHLGYVEVNWRKVEREVMRLFDLDGDQRLTTRDVAMYWKKLKGMLMHKLPNTTAFAAFFTLGL 223
            D+ V  ++ +  G + G+++  GA+GF AG ++K I K AA  IG+ F+ +Q+    GY++++W+KVE++ +   D +GD ++T  D  ++WKK   +  H LP++  FAA F LGL
Sbjct:   87 DDPVSRLIDQYAGSV-GQVSFGGAVGFCAGMAVKSIGKVAAVAIGVVFIGAQMAASAGYIQIDWKKVEKDAIAAVDPNGDGKITPDDFKIWWKKFLALSKHNLPSSGGFAAGFFLGL 202
[Close]
BLAST of NO18G00690 vs. NCBI_GenBank
Match: OQR99017.1 (hypothetical protein ACHHYP_07365 [Achlya hypogyna])

HSP 1 Score: 95.1 bits (235), Expect = 2.900e-16
Identity = 46/121 (38.02%), Postives = 74/121 (61.16%), Query Frame = 0 
Query:  102 NGDDDEEVEGILSRALGPLGGEITLSGALGFGAGYSLKKISKAAAFFIGIAFVASQIFGHLGYVEVNWRKVEREVMRLFDLDGDQRLTTRDVAMYWKKLKGMLMHKLPNTTAFAAFFTLGL 223
            +G DD+ V  I+ +  G   GEI+  G LGF +G ++K++ KAAA  IGI FV +Q+    GY+ +NW KVE++ +   D DGD ++T +D  ++WK+      +  P+++ FAA F  G+
Sbjct:   76 DGKDDDAVSRIIDQ-FGSKIGEISFGGFLGFCSGAAVKQVGKAAAVSIGIIFVMAQLAASKGYININWSKVEKDAIAAVDPDGDGKITQKDFKIWWKRFLEFAQYNFPSSSGFAAGFAAGI 195
[Close]
BLAST of NO18G00690 vs. NCBI_GenBank
Match: KOO34162.1 (fun14 family protein [Chrysochromulina sp. CCMP291])

HSP 1 Score: 94.4 bits (233), Expect = 5.000e-16
Identity = 44/110 (40.00%), Postives = 66/110 (60.00%), Query Frame = 0 
Query:  113 LSRALGPLGGEITLSGALGFGAGYSLKKISKAAAFFIGIAFVASQIFGHLGYVEVNWRKVEREVMRLFDLDGDQRLTTRDVAMYWKKLKGMLMHKLPNTTAFAAFFTLGL 223
            +S  L P G +      LG  AGY+L+ + KAAAF IG +F+  Q   +LGYV+V+WRKVER+     D DGD ++T  D+A+ W++++ +L+   P  T F A    G+
Sbjct:   27 VSTDLVPAGSQALFGSGLGTAAGYALRVVGKAAAFTIGASFIGLQTLSYLGYVQVDWRKVERDTTAKLDRDGDGKVTANDLALVWREVESVLIFNCPAGTGFTAGLLYGI 136
[Close]
BLAST of NO18G00690 vs. NCBI_GenBank
Match: XP_009523020.1 (hypothetical protein PHYSODRAFT_558741 [Phytophthora sojae] >EGZ20303.1 hypothetical protein PHYSODRAFT_558741 [Phytophthora sojae])

HSP 1 Score: 94.0 bits (232), Expect = 6.500e-16
Identity = 49/136 (36.03%), Postives = 84/136 (61.76%), Query Frame = 0 
Query:   87 APSHRPVSSYPPNPNNGDDDEEVEGILSRALGPLGGEITLSGALGFGAGYSLKKISKAAAFFIGIAFVASQIFGHLGYVEVNWRKVEREVMRLFDLDGDQRLTTRDVAMYWKKLKGMLMHKLPNTTAFAAFFTLGL 223
            A +  P  S  PN    D    VE I+   LG   GE+TL+G LGF +GY+LK++ KAAA  +GI F+ +Q   + GY+++ W KV+++++   D +GD ++ + DV ++++KL  ++   LP++  F++ F LG+
Sbjct:   82 AAADGPSGSGDPNKKKSD---PVEQIIDVVLGNC-GELTLAGGLGFCSGYALKQVGKAAALAVGIVFIMAQTAAYNGYIDIKWGKVQKDMIAKVDPNGDGKIDSEDVKLWYRKLLKIMKTNLPSSAGFSSGFALGI 213
[Close]
BLAST of NO18G00690 vs. NCBI_GenBank
Match: XP_008902826.1 (hypothetical protein PPTG_09568 [Phytophthora parasitica INRA-310] >ETI51196.1 hypothetical protein F443_05396 [Phytophthora parasitica P1569] >ETL97651.1 hypothetical protein L917_05093 [Phytophthora parasitica] >ETM50808.1 hypothetical protein L914_05209 [Phytophthora parasitica] >ETN11903.1 hypothetical protein PPTG_09568 [Phytophthora parasitica INRA-310] >ETO79938.1 hypothetical protein F444_05441 [Phytophthora parasitica P1976] >ETP20959.1 hypothetical protein F441_05403 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 92.8 bits (229), Expect = 1.400e-15
Identity = 43/117 (36.75%), Postives = 78/117 (66.67%), Query Frame = 0 
Query:  106 DEEVEGILSRALGPLGGEITLSGALGFGAGYSLKKISKAAAFFIGIAFVASQIFGHLGYVEVNWRKVEREVMRLFDLDGDQRLTTRDVAMYWKKLKGMLMHKLPNTTAFAAFFTLGL 223
            D+ VE I+   L    GE+TL+G LGF +GY+LK++ +AAA  +GI FV +Q   + GY+++ W KV+++++   D +GD ++ + DV ++++KL  ++   LP++  F++ F LG+
Sbjct:   95 DDPVEKIIDVVLSNC-GELTLAGGLGFCSGYALKQVGRAAAVAVGIVFVMAQAAAYNGYIDIKWGKVQKDMIAKVDPNGDGKIDSEDVKLWYRKLLKIMKTNLPSSAGFSSGFALGV 210
[Close]
BLAST of NO18G00690 vs. NCBI_GenBank
Match: ETK91113.1 (hypothetical protein L915_05253 [Phytophthora parasitica] >ETL44486.1 hypothetical protein L916_05208 [Phytophthora parasitica] >ETP48913.1 hypothetical protein F442_05446 [Phytophthora parasitica P10297])

HSP 1 Score: 92.8 bits (229), Expect = 1.400e-15
Identity = 43/117 (36.75%), Postives = 78/117 (66.67%), Query Frame = 0 
Query:  106 DEEVEGILSRALGPLGGEITLSGALGFGAGYSLKKISKAAAFFIGIAFVASQIFGHLGYVEVNWRKVEREVMRLFDLDGDQRLTTRDVAMYWKKLKGMLMHKLPNTTAFAAFFTLGL 223
            D+ VE I+   L    GE+TL+G LGF +GY+LK++ +AAA  +GI FV +Q   + GY+++ W KV+++++   D +GD ++ + DV ++++KL  ++   LP++  F++ F LG+
Sbjct:   95 DDPVEKIIDVVLSNC-GELTLAGGLGFCSGYALKQVGRAAAVAVGIVFVMAQAAAYNGYIDIKWGKVQKDMIAKVDPNGDGKIDSEDVKLWYRKLLKIMKTNLPSSAGFSSGFALGV 210
[Close]
BLAST of NO18G00690 vs. NCBI_GenBank
Match: KUF79573.1 (FUN14 domain-containing protein 1 [Phytophthora nicotianae])

HSP 1 Score: 92.8 bits (229), Expect = 1.400e-15
Identity = 43/117 (36.75%), Postives = 78/117 (66.67%), Query Frame = 0 
Query:  106 DEEVEGILSRALGPLGGEITLSGALGFGAGYSLKKISKAAAFFIGIAFVASQIFGHLGYVEVNWRKVEREVMRLFDLDGDQRLTTRDVAMYWKKLKGMLMHKLPNTTAFAAFFTLGL 223
            D+ VE I+   L    GE+TL+G LGF +GY+LK++ +AAA  +GI FV +Q   + GY+++ W KV+++++   D +GD ++ + DV ++++KL  ++   LP++  F++ F LG+
Sbjct:   72 DDPVEKIIDVVLSNC-GELTLAGGLGFCSGYALKQVGRAAAVAVGIVFVMAQAAAYNGYIDIKWGKVQKDMIAKVDPNGDGKIDSEDVKLWYRKLLKIMKTNLPSSAGFSSGFALGV 187
The following BLAST results are available for this feature:
BLAST of NO18G00690 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM23280.13.300e-4447.09fun14 family protein [Nannochloropsis gaditana][more]
GAX96212.11.200e-1738.79Hypothetical protein PINS_004106 [Pythium insidios... [more]
XP_008862380.11.000e-1637.19hypothetical protein H310_01127 [Aphanomyces invad... [more]
XP_009821803.12.200e-1636.75hypothetical protein H257_00695 [Aphanomyces astac... [more]
OQR99017.12.900e-1638.02hypothetical protein ACHHYP_07365 [Achlya hypogyna... [more]
KOO34162.15.000e-1640.00fun14 family protein [Chrysochromulina sp. CCMP291... [more]
XP_009523020.16.500e-1636.03hypothetical protein PHYSODRAFT_558741 [Phytophtho... [more]
XP_008902826.11.400e-1536.75hypothetical protein PPTG_09568 [Phytophthora para... [more]
ETK91113.11.400e-1536.75hypothetical protein L915_05253 [Phytophthora para... [more]
KUF79573.11.400e-1536.75FUN14 domain-containing protein 1 [Phytophthora ni... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL008nonsL008Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR064ncniR064Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR043ngnoR043Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003924NSK003924Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO18G00690.1NO18G00690.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|609213gene_9580Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100181g3gene7171Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO18G00690.1NO18G00690.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO18G00690 ID=NO18G00690|Name=NO18G00690|organism=Nannochloropsis oceanica|type=gene|length=823bp
ACACCCACAGAAGCCTTGCACATCCACATAATACACAAGTCTTCATTAAA
GATATCACGGCTCTTTTTTTGTCGTAGCACGCACTGCCTGTTCACTCTCC
CGCAAAACCATCATGATCGAGAGCCTGCTTCGAGCTCGCCCTCAAAACCG
GACCAGCACCACAGCCTTTATCAATCGTTTTATCGCCCTACCACAACAAA
GCTGCCCTGGCGCCCTAAGTATAGCGACCACAACCACACTGACATTCAAG
CGCGGCTCGCGGCTTCTAGCAATATGTACTTTTATCGCGGCTGCTAATCA
AGACCTCAAAGCCCTCTCTTATTCCCCATCTTTCTGCCAACCTGCCTCTT
CCTCCTCCAATTCCAGCACAGCCCCCAGTCATCGTCCCGTCTCCTCCTAC
CCTCCCAACCCTAACAATGGTGACGACGACGAGGAAGTAGAAGGCATCTT
ATCTCGTGCTCTTGGCCCGTTGGGAGGGGAGATAACATTAAGTGGTGCCT
TGGGGTTTGGTGCCGGGTACTCTCTGAAGAAAATAAGCAAGGCGGCCGCA
TTTTTCATTGGAATTGCGTTTGTGGCATCGCAAATATTTGGTCATTTGGG
GTATGTGGAGGTAAATTGGCGGAAGGTTGAGAGGGAGGTAATGCGGTTAT
TCGATTTGGATGGCGATCAGAGATTGACGACAAGGGACGTGGCGATGTAT
TGGAAAAAGTTGAAGGGGATGTTGATGCATAAGCTACCAAACACGACGGC
GTTCGCGGCATTTTTTACCTTAGGGCTGCAGAAGGGTTAGGGTCTGGAAT
ATGAAGGGAGGGGCGGGAGGGAG
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protein sequence of NO18G00690.1

>NO18G00690.1-protein ID=NO18G00690.1-protein|Name=NO18G00690.1|organism=Nannochloropsis oceanica|type=polypeptide|length=226bp
MIESLLRARPQNRTSTTAFINRFIALPQQSCPGALSIATTTTLTFKRGSR
LLAICTFIAAANQDLKALSYSPSFCQPASSSSNSSTAPSHRPVSSYPPNP
NNGDDDEEVEGILSRALGPLGGEITLSGALGFGAGYSLKKISKAAAFFIG
IAFVASQIFGHLGYVEVNWRKVEREVMRLFDLDGDQRLTTRDVAMYWKKL
KGMLMHKLPNTTAFAAFFTLGLQKG*
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Synonyms
Publications