NO18G00590, NO18G00590 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO18G00590 vs. NCBI_GenBank
Match: XP_005534784.1 (hypothetical protein CYME_CMJ033C [Cyanidioschyzon merolae strain 10D] >BAM80177.1 hypothetical protein CYME_CMJ033C [Cyanidioschyzon merolae strain 10D]) HSP 1 Score: 94.7 bits (234), Expect = 9.000e-16 Identity = 70/205 (34.15%), Postives = 102/205 (49.76%), Query Frame = 0 Query: 291 LPCTSLGGHCPYVHFTCSKGH--SWKAEAGTPACFYCPRCREATRSVRGWATGSTSSLPPLLRRRRPRTRTLPLESASRFREVVGKKGGVVLGA-YIGAKRKVRLKCPRA-HEWEATPDNILR-GSWCPTCAKGTRKEKQTLSVSDMQALATAAGGEGATFLSPTYRGSSIPHLWMCGGGEXXXXXXXXXXXVFEKTPNYVRKGL 491 L C + CP + FTC +GH S A + + CP C+ A R R S PL +R R L++A+ ++GG +L Y+ A+RK+ +C + HEW AT DNILR GSWCP CA+ R+ + ++++DMQA+A GG LS YRG+ +P + C G F PN +R+G+ Sbjct: 136 LACGAPATICPVIRFTCRRGHVVSVAANSKLASRGECPVCQYAARCGR---ASSLREYRPLQSKRFERYTLDMLKAAAM------ERGGELLSTEYVNARRKLLWRCGQCKHEWFATTDNILRLGSWCPKCAR--RQGRNRVTLADMQAIADMHGG---VCLSKEYRGAMVPLQFRCAEGHE-----------FWANPNNIRRGI 315
BLAST of NO18G00590 vs. NCBI_GenBank
Match: XP_005708997.1 (hypothetical protein Gasu_02540 [Galdieria sulphuraria] >EME32477.1 hypothetical protein Gasu_02540 [Galdieria sulphuraria]) HSP 1 Score: 92.8 bits (229), Expect = 3.400e-15 Identity = 60/175 (34.29%), Postives = 82/175 (46.86%), Query Frame = 0 Query: 292 PCTSLGGHCPYVHFTCSKGHSWKAEAGTPACFYCPRCREATRSVRGWATGSTSSLPPLLRRRRPRTRTLPLESASRFREVVGKKGGVVLG-AYIGAKRKVRLKCPRAHEWEATPDNILRGSWCPTCAKGTRKEKQTLSVSDMQALATAAGGEGATFLSPTYRGSSIPHLWMCGGG 466 PC G CP++ + C +GH KA G+P C CP C + + L P LR R T PL S + + ++GG+ L Y + K +C HEW A+ DN+ RGSWCP CA+ T QTL +S+++ LA GG LS Y+ W C G Sbjct: 97 PCGD-GASCPFIKYQCERGHIIKALKGSPVCKVCPLC----------TYEAEAELCPELR----RGSTKPL-SLGTMQRIALRRGGLCLSTTYKSVRDKFLWRCGEGHEWYASGDNVRRGSWCPICARKT----QTLDLSELEELAKERGGR---CLSTVYKNVHQKLKWECSQG 248
BLAST of NO18G00590 vs. NCBI_GenBank
Match: WP_062307393.1 (hypothetical protein [Polynucleobacter sinensis]) HSP 1 Score: 82.4 bits (202), Expect = 4.600e-12 Identity = 54/203 (26.60%), Postives = 86/203 (42.36%), Query Frame = 0 Query: 302 YVHFTCSKGHSWKAEAGT-PACFYCPRCREATRSVRGWATGSTSSLPPLLRRRRPRTRTLPLESASRFREVVGKKGGVVLG-AYIGAKRKVRLKCPRAHEWEATPDNILRGSWCPTCAKGTRKEKQTLSVSDMQALATAAGGEGATFLSPTYRGSSIPHLWMCGGGEXXXXXXXXXXXVFEKTPNYVRKGLVIGRAFCRECER 503 ++ +TCS+ H W A T +CP C + + + +S F+ + ++GGV L Y+G +K++ +C HEWE+TP I G+WCP C + + S+ DMQ LA GG LS Y + W C G V+E TP+ +++G ++C +C R Sbjct: 23 HLRWTCSERHEWSALPNTIKKGHWCPICANSGTAAK--------------------------KSIEEFQAIAKERGGVCLSDEYLGIFKKLKWRCGEGHEWESTPKTIQAGNWCPKCGRIKVGNQLRKSIDDMQVLAYRNGG---VCLSNEYLNACTKLKWRCKEGH-----------VWESTPDTIQQG-----SWCPKCRR 180
BLAST of NO18G00590 vs. NCBI_GenBank
Match: OSX72809.1 (hypothetical protein BU14_0403s0010 [Porphyra umbilicalis]) HSP 1 Score: 80.9 bits (198), Expect = 1.400e-11 Identity = 49/151 (32.45%), Postives = 68/151 (45.03%), Query Frame = 0 Query: 292 PCTSLGGHCPYVHFTCSKGHSWKAEAGTPACFYCPRCREATRSVRGWATGSTSSLPPLLRRRRPRTRTLPLESASRFREVVGKKGGVVL-GAYIGAKRKVRLKCPRAHEWEATPDNILRGSWCPTCAKGTRKEKQTLSVSDMQALATAAGG 442 PC + G CPY+ + C +GH A +PA CP C T P RP+ S + + + +GG +L AY+ A+ V C H W AT DN+ RGSWCPTCA+ +E ++ +A A A GG Sbjct: 107 PCAT--GPCPYLRYRCPRGHIITAARASPAAVVCPAC----------TFEGTCGAP-----HRPK------HSIASLKALAASRGGFLLSSAYVNARTPVVWACGAGHAWPATADNVRRGSWCPTCARAASRE---AGLAGARAAAAARGG 231
BLAST of NO18G00590 vs. NCBI_GenBank
Match: WP_026811301.1 (hypothetical protein [Arenibacter latericius]) HSP 1 Score: 77.8 bits (190), Expect = 1.100e-10 Identity = 56/198 (28.28%), Postives = 87/198 (43.94%), Query Frame = 0 Query: 307 CSKGHSWKAEAG-TPACFYCPRCREATRSVRGWATGSTSSLPPLLRRRRPRTRTLPLESASRFREVVGKKGGVVLG-AYIGAKRKVRLKCPRAHEWEATPDNILRGSWCPTCAKGTRKEKQTLSVSDMQALATAAGGEGATFLSPTYRGSSIPHLWMCGGGEXXXXXXXXXXXVFEKTPNYVRKGLVIGRAFCRECER 503 C KGH W A AG A +C +C S S+ LL F+E+ ++GG L Y A K+ +C + H+W A +++ RGSWCPTC K +K++L ++ M+ LA G+ LS Y + W C G +F+K+P+ ++KG +C EC++ Sbjct: 409 CDKGHKWLAPAGRVKAGSWCLKC-------------SGSAKLTLL----------------TFQEIAKERGGRCLSDNYKNANSKLEWECSKGHKWMARANHVKRGSWCPTCRKTDGTKKRSLGITKMKELAEQFNGK---CLSVDYINNKSKLTWECNRGH-----------IFDKSPSDLKKG-----RWCPECKK 558
BLAST of NO18G00590 vs. NCBI_GenBank
Match: OED36605.1 (hypothetical protein AB834_02920, partial [PVC group bacterium (ex Bugula neritina AB1)]) HSP 1 Score: 76.6 bits (187), Expect = 2.500e-10 Identity = 36/97 (37.11%), Postives = 54/97 (55.67%), Query Frame = 0 Query: 370 EVVGKKGGVVLGA-YIGAKRKVRLKCPRAHEWEATPDNILRGSWCPTCAKGTRKEKQTLSVSDMQALATAAGGEGATFLSPTYRGSSIPHLWMCGGG 466 E+ KGG L Y+ A K++ KC H+WE +P+ I RGSWCP+C + + +K+ S+ ++ LA + GG+ FLS Y H W+C G Sbjct: 102 ELAEAKGGKCLSTNYVNAHTKLKWKCKEGHQWETSPNKIKRGSWCPSCGRKSSNDKRRGSLKELHKLAESRGGK---FLSTEYINVDTKHEWICKQG 195
BLAST of NO18G00590 vs. NCBI_GenBank
Match: AET91684.1 (hypothetical protein BYI23_B010770 [Burkholderia sp. YI23]) HSP 1 Score: 75.9 bits (185), Expect = 4.300e-10 Identity = 58/205 (28.29%), Postives = 81/205 (39.51%), Query Frame = 0 Query: 298 GHCPYVHFTCSKGHSWKAE-AGTPACFYCPRCREATRSVRGWATGSTSSLPPLLRRRRPRTRTLPLESASRFREVVGKKGGVVLG-AYIGAKRKVRLKCPRAHEWEATPDNILRGSWCPTCAKGTRKEKQTLSVSDMQALATAAGGEGATFLSPTYRGSSIPHLWMCGGGEXXXXXXXXXXXVFEKTPNYVRKGLVIGRAFCREC 501 G Y F C+ H W+A A +CPRCR+A SVR + R E K+ G L Y G+ + R +C HEW T +I G WC CA K +Q ++ +M A+A + GG+ LS G + H W C G V+E P V++G ++C EC Sbjct: 154 GVLTYYPFECASDHCWEARGAKIFEGSWCPRCRDAATSVRA------------------TKLFFYHDGLERLHETARKRDGQCLAEEYTGSNVRYRFRCSADHEWTQTAASIWEGYWCARCA----KIEQRTTIEEMHAIAASHGGK---CLSQQSEGGRVKHTWECHLGH-----------VWEAAPYNVKRG-----SWCPEC 317
BLAST of NO18G00590 vs. NCBI_GenBank
Match: WP_050878464.1 (hypothetical protein [Burkholderia sp. YI23]) HSP 1 Score: 75.9 bits (185), Expect = 4.300e-10 Identity = 58/205 (28.29%), Postives = 81/205 (39.51%), Query Frame = 0 Query: 298 GHCPYVHFTCSKGHSWKAE-AGTPACFYCPRCREATRSVRGWATGSTSSLPPLLRRRRPRTRTLPLESASRFREVVGKKGGVVLG-AYIGAKRKVRLKCPRAHEWEATPDNILRGSWCPTCAKGTRKEKQTLSVSDMQALATAAGGEGATFLSPTYRGSSIPHLWMCGGGEXXXXXXXXXXXVFEKTPNYVRKGLVIGRAFCREC 501 G Y F C+ H W+A A +CPRCR+A SVR + R E K+ G L Y G+ + R +C HEW T +I G WC CA K +Q ++ +M A+A + GG+ LS G + H W C G V+E P V++G ++C EC Sbjct: 103 GVLTYYPFECASDHCWEARGAKIFEGSWCPRCRDAATSVRA------------------TKLFFYHDGLERLHETARKRDGQCLAEEYTGSNVRYRFRCSADHEWTQTAASIWEGYWCARCA----KIEQRTTIEEMHAIAASHGGK---CLSQQSEGGRVKHTWECHLGH-----------VWEAAPYNVKRG-----SWCPEC 266
BLAST of NO18G00590 vs. NCBI_GenBank
Match: WP_002204126.1 (hypothetical protein [Bacillus cereus] >EJV76014.1 hypothetical protein IG3_05323 [Bacillus cereus HuA2-1]) HSP 1 Score: 75.5 bits (184), Expect = 5.700e-10 Identity = 55/194 (28.35%), Postives = 80/194 (41.24%), Query Frame = 0 Query: 298 GHCPYVHFTCSKGHSWKAEAGTPACFYCPR-CREATRSVRGWATGSTSSLPPLLRRRRPRTRTLPLESASRFREVVGKKGGVVLGAYIGAKRKVRLKCPRAHEWEATPDNILRGSWCPTCAKGTRKEKQTLSVSDMQALATAAGGEGATFLSPTYRGSSIPHLWMCGGGEXXXXXXXXXXXVFEKTPNYVRKGL 491 G + F C KGH WKA +PA + CR+ + G ST +L + KKG + Y K K+ C + H W+ TPDN+ +G WCP CAK RK L++ +M+ALA G LS Y ++ LW C G ++E P +++G+ Sbjct: 408 GSLSNLSFQCKKGHVWKA---SPANIIAGKWCRKCSYKSTGLKLRSTIEEMHILAK--------------------DKKGACLSTEYKNTKSKLEWICSKGHIWKMTPDNVKQGKWCPICAKENRK----LTIEEMKALAKDKKG---YCLSQVYINNNTKMLWACEKGH-----------IWEARPREIKRGI 560
BLAST of NO18G00590 vs. NCBI_GenBank
Match: WP_089446803.1 (hypothetical protein [Burkholderia sp. AU33423] >OXI80476.1 hypothetical protein CFB50_18500 [Burkholderia sp. AU33423]) HSP 1 Score: 75.1 bits (183), Expect = 7.400e-10 Identity = 57/167 (34.13%), Postives = 72/167 (43.11%), Query Frame = 0 Query: 305 FTCSKGHSWKAEA-----GTPACFYCPRCREATRSVRGWATGSTSSLPPLLRRRRPRTRTLPLESASRFREVVGKKGGVVLG-AYIGAKRKVRLKCPRAHEWEATPDNILRGSWCPTCAKGTRKEKQTLSVSDMQALATAAGGEGATFLSPTYRGSSIPHLWMCGGG 466 F C+KGH W+A A GT +C RC + T S+ + P +R + KKGGV L AY+G+ K +C HEW A I G WC CA K +QT + DM+ALATA GG LS Y+G W C G Sbjct: 159 FECAKGHRWEARANDIFRGT----WCGRCAKLT---------SSGLVDP--------------NGLARLQAAARKKGGVCLADAYVGSAEKYPFRCAAGHEWMAIASQIWLGHWCRQCA--GLKLRQT--IDDMRALATARGG---LCLSKEYQGRRTKLTWQCHRG 291 The following BLAST results are available for this feature:
BLAST of NO18G00590 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO18G00590 ID=NO18G00590|Name=NO18G00590|organism=Nannochloropsis oceanica|type=gene|length=3611bpback to top protein sequence of NO18G00590.1 >NO18G00590.1-protein ID=NO18G00590.1-protein|Name=NO18G00590.1|organism=Nannochloropsis oceanica|type=polypeptide|length=537bpback to top Synonyms
Publications
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