NO18G00380, NO18G00380 (gene) Nannochloropsis oceanica

Overview
NameNO18G00380
Unique NameNO18G00380
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3208
Alignment locationchr18:157419..160626 -

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Properties
Property NameValue
DescriptionShort-chain dehydrogenase/reductase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr18genomechr18:157419..160626 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR036291NAD(P)-bd_dom_sf
IPR002347Glc/ribitol_DH
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
Homology
BLAST of NO18G00380 vs. NCBI_GenBank
Match: CBN79894.1 (Short-chain dehydrogenase/reductase [Ectocarpus siliculosus])

HSP 1 Score: 266.9 bits (681), Expect = 8.600e-68
Identity = 144/306 (47.06%), Postives = 205/306 (66.99%), Query Frame = 0
Query:   40 LQGKVALVTGASRGIGRGIAFELAAAGATVYATARSLGDKECTEASLGGTLTSLVEEVQATSLISGSVVPLSCDHGQDTQVEAVLNHIQEKEGKLHYLINNAFALPAAGVDGMVGVSFWEQGTQVWDSVMNVGLRSHYVAACAAVPLMIATREKEGCTPA-ICNVGSFGGVSYVFNVAYGVGKAGVDRLSRDMAIELKKEGISSFSLWPGVVLTERMEDMRRQDPEKWEKEMGVG-EGYLETPRFAGRALAALLSASLPSSSSPRPSLLMDRSGSIQIVAELARENGVKDVDGGQPPSIRSLQFLV 344
            L+GKVA+VTG+SRGIG+GIA  L   G TVY T RS+G    T+  +GG+L     E++A     G  +P++CDH +D QV+A+   ++ ++G+L  L+NNAFAL   G    +   FW QG   WDS++ VGLRSHY+A+C A PLMI + +  G  P  I  V SFGG++Y FNVAYGVGKAGVDRL++DMAIEL++E ++  S++PG+V TE+M+ +  ++P ++E   G+     +ETP F GRA+AAL       ++ P    ++ ++G +QIVAELA++ G  DV G  PPSIRSL+FL+
Sbjct:   87 LRGKVAVVTGSSRGIGKGIAVTLGQRGCTVYVTGRSVGG-NTTDKEIGGSLEETAAEIEAA---GGKGIPVACDHAKDEQVKALFERVESEQGRLDILVNNAFAL---GPGDQLQAKFWTQGADAWDSLITVGLRSHYMASCFAAPLMIKSVKDRGGKPGLIACVSSFGGLAYSFNVAYGVGKAGVDRLAKDMAIELEEEKVAVVSVYPGIVKTEKMKSLMTKNPAEFEANTGIALSSPMETPFFTGRAVAAL-------AADPE---ILKKTGKVQIVAELAKQYGFTDVGGDTPPSIRSLRFLL 375          
BLAST of NO18G00380 vs. NCBI_GenBank
Match: XP_002180072.1 (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >EEC48263.1 predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 230.3 bits (586), Expect = 8.900e-57
Identity = 139/316 (43.99%), Postives = 193/316 (61.08%), Query Frame = 0
Query:   44 VALVTGASRGIGRGIAFELAAAGATVYATARSLGDKECT------------EASLGGTLTSLVEEVQATSLISGSVVPLSCDHGQDTQVEAVLNHIQEKEGKLHYLINNAFALPAAGVDGMVGVSFWEQGTQVWDSVMNVGLRSHYVAACAAVPLMIATR---EKEGCTPAICNVGSFGGVSYVFNVAYGVGKAGVDRLSRDMAIELKKEGISSFSLWPGVVLTER-MEDMRRQDPEKWEKEMGVGEGYLETPRFAGRALAALLSASLPSSSSPRPSLLMDRSGSIQIVAELARENGVKDVDGGQPPSIRSLQFLV 344
            V LVTGASRGIG+GIA EL   GA VY T  S  D   +            E+   GT+    +E+       G  V + C+H  D++V+ +++ I+   G+L  LINNAF LP  GV+ M+   FWEQG ++WD++  VGLRSH+VA+  A+PL+ A +   ++    P +  V SFGG++Y FNV YGVGKAGVDRL++DMA+EL  E I   S WPGVV TER  E +++ D   WEK +G+     ETP F G+A+ A  +A+ PS+        M ++G+ Q+VAEL+ E    DV+G +PPSIRSL+FL+
Sbjct:    1 VCLVTGASRGIGKGIALELGKQGAIVYITGTSTSDNSSSLNAATGPYSATKESGGPGTIEQTAQEIMNA---GGIGVAVLCNHAVDSEVKHLMDRIERDHGRLDILINNAFRLPQGGVE-MLYKKFWEQGPEIWDTLHTVGLRSHFVASVYAMPLLQAAKKNPQRNLPRPFVGMVSSFGGLTYTFNVPYGVGKAGVDRLAKDMAVELTPEDICVVSFWPGVVDTERTQESVKKGD---WEKYVGLPLDNAETPGFTGKAIIA--TATDPSN--------MRKTGTYQVVAELSEEYNFFDVNGNRPPSIRSLRFLL 299          
BLAST of NO18G00380 vs. NCBI_GenBank
Match: CEM02274.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 226.1 bits (575), Expect = 1.700e-55
Identity = 140/308 (45.45%), Postives = 188/308 (61.04%), Query Frame = 0
Query:   39 PLQGKVALVTGASRGIGRGIAFELAAAGATVYATARSL-GDKECTEASLGGTLTSLVEEVQATSLISGSVVPLSCDHGQDTQVEAVLNHIQEKEGKLHYLINNAFALPAAGVDGMVGVSFWEQGTQVWDSVMNVGLRSHYVAACAAVPLMIATREKEGCTPAICNVGSFGGVSYVFNVAYGVGKAGVDRLSRDMAIELKKEGISSFSLWPGVVLTERM-EDMRRQDPEKWEKEMGVGEGYL-ETPRFAGRALAALLSASLPSSSSPRPSLLMDRSGSIQIVAELARENGVKDVDGGQPPSIRSLQFLV 344
            PLQG  A+VTGA+RGIGRGIA  LA +GATVY T R+L G K+        TL SL E  Q      G  + L CD   D Q+E +   ++ + G L  L+NNAF +P    D M G  FW+   ++WD +  VGLRSH+VA+  A PL++   +++G    I NV S+GGV Y+F+V YG+GKAG+DR++ DMA ELK   ++  SLWPG V TE   + ++  DP       GV + YL E+P ++GRA+AAL  ASLP      P   + R+GS+Q+ AELA E    D DG +PPS RSL+FL+
Sbjct:   42 PLQGLTAVVTGATRGIGRGIAIGLAESGATVYITGRTLKGGKD--------TLGSLEEVQQTIKDKGGECIALQCDSADDRQLEQLFKRVERENGGLDVLVNNAFTIPQPVSDWM-GKPFWQSPAKLWDVINGVGLRSHFVASALASPLLL---QRKG---LIVNVSSWGGVRYIFHVIYGIGKAGMDRMAADMAEELKPHNVTVVSLWPGKVRTENFYKLLQENDP----LTKGVLDPYLSESPLYSGRAVAAL--ASLP------PHKRLKRTGSVQVTAELASEFNFNDEDGTRPPSFRSLRFLL 322          
BLAST of NO18G00380 vs. NCBI_GenBank
Match: WP_096553519.1 (short-chain dehydrogenase [Nostoc sp. NIES-4103] >BAZ49269.1 short-chain dehydrogenase/reductase SDR [Nostoc sp. NIES-4103])

HSP 1 Score: 226.1 bits (575), Expect = 1.700e-55
Identity = 139/316 (43.99%), Postives = 187/316 (59.18%), Query Frame = 0
Query:   40 LQGKVALVTGASRGIGRGIAFELAAAGATVYATARSLGDKECTEASLGGTLTSLVEEVQATSLISGSVVPLSCDHGQDTQVEAVLNHIQ-EKEGKLHYLINNAFALPAAGVDGMVGVS---FWEQGTQVWDSVMNVGLRSHYVAACAAVPLMIATREKEGCTPAICNVGSFGGVSYVFNVAYGVGKAGVDRLSRDMAIELKKEGISSFSLWPGVVLTE-------RMEDMRRQDPEKWEKEMGVGEGY-LETPRFAGRALAALLSASLPSSSSPRPSLLMDRSGSIQIVAELARENGVKDVDGGQPPSIRSLQFLV 344
            L+GKV LVTGA+RGIGRGIA  L  AGATVY T RSL   + ++   G    SL E   A     G  +P+  DH  D QV  +   IQ E+ G+L  L+NNA+    AGV  +   S   FW+    +WD+  NVGLRSHYVA+  A  +M  T++K G    IC + S+GG+SY+F  AYG GKAG DRL+ DMA+ELK   ++S SLWPG+V TE       +M++    DP    K + + + Y  ETP   GR +AAL  AS P+        +M R+G + IVAELA++  + D DG +P S+RSL+F++
Sbjct:    4 LEGKVTLVTGATRGIGRGIAIGLGEAGATVYITGRSLNQSDASDRIFG----SLGETQSAVEAAGGVCIPVQVDHSDDEQVRLLFERIQDEQHGQLDLLVNNAY----AGVQALANASGQPFWDCNPSLWDACNNVGLRSHYVASVFAARMM--TKQKSG---LICTISSWGGLSYIFGTAYGAGKAGCDRLASDMAVELKPHNVASVSLWPGIVGTELFSEFASQMQEQNLTDP----KSLLISDRYNWETPLLTGRVIAAL--ASEPN--------IMGRTGRVHIVAELAKQYNLVDQDGSRPASLRSLRFVL 292          
BLAST of NO18G00380 vs. NCBI_GenBank
Match: AFY46675.1 (dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein [Nostoc sp. PCC 7524])

HSP 1 Score: 224.6 bits (571), Expect = 4.900e-55
Identity = 139/313 (44.41%), Postives = 190/313 (60.70%), Query Frame = 0
Query:   40 LQGKVALVTGASRGIGRGIAFELAAAGATVYATARSLGDKECTEASLGGTLTSLVEEVQATSLISGSVVPLSCDHGQDTQVEAVLNHIQ-EKEGKLHYLINNAFALPAAGVDGMV---GVSFWEQGTQVWDSVMNVGLRSHYVAACAAVPLMIATREKEGCTPAICNVGSFGGVSYVFNVAYGVGKAGVDRLSRDMAIELKKEGISSFSLWPGVVLTERM----EDMRRQDPEKWEKEMGVGEGY-LETPRFAGRALAALLSASLPSSSSPRPSLLMDRSGSIQIVAELARENGVKDVDGGQPPSIRSLQFLV 344
            L+GKVALVTGA+RGIG+GIA  L  AGATVY T R L     +  ++GG   SL E   A +   G  +P+  DH  D QV  +   IQ E+ G+L  L+NNA+     GV  +    G  FWE   ++WD+  NVGLRSHYVA+  A  +M  ++++ G    ICN+ S+GG+SY+F VAYG GKA  DRL+ DMA+ELK + I+  SLWPG+V TE +     +M  Q+P   ++   + E Y  ETP   GRA+A L  AS P+        ++ R+G +QIVAELA++  + D DG  P S+RSL+FL+
Sbjct:   25 LEGKVALVTGATRGIGKGIAIGLGEAGATVYITGRRLDSNSASSENVGG---SLSETQSAVTQAGGLCIPVQVDHSDDEQVRILFERIQDEQHGQLDLLVNNAY----GGVQALTAAQGKPFWESEPRLWDACNNVGLRSHYVASIFAARMM--SQQQRG---LICNISSWGGLSYIFGVAYGAGKAACDRLTADMAVELKPDNITVISLWPGIVGTEHISRLASEMEEQNPTD-QQNFVISERYNWETPLLTGRAIAKL--ASEPN--------VIRRTGRVQIVAELAKQYRLVDQDGNLPASLRSLRFLL 314          
BLAST of NO18G00380 vs. NCBI_GenBank
Match: WP_036484455.1 (KR domain-containing protein [Myxosarcina sp. GI1])

HSP 1 Score: 224.6 bits (571), Expect = 4.900e-55
Identity = 138/305 (45.25%), Postives = 184/305 (60.33%), Query Frame = 0
Query:   40 LQGKVALVTGASRGIGRGIAFELAAAGATVYATARSLGDKECTEASLGGTLTSLVEEVQATSLISGSVVPLSCDHGQDTQVEAVLNHIQEKEGKLHYLINNAFALPAAGVDGMVGVSFWEQGTQVWDSVMNVGLRSHYVAACAAVPLMIATREKEGCTPAICNVGSFGGVSYVFNVAYGVGKAGVDRLSRDMAIELKKEGISSFSLWPGVVLTERMEDMRRQDPEKWEKEMGVGEGY-LETPRFAGRALAALLSASLPSSSSPRPSLLMDRSGSIQIVAELARENGVKDVDGGQPPSIRSLQFLV 344
            L+GK+ALVTGA+RGIG+GIA  L  AGATVY T RSL     +E S      SL E   A     G+ +P+  DH  D QV  + + I+ + G+L  L+NN F+   A  D   G  FW+    VWD+V NVGLRSHYV +  A  LM  ++ ++G    IC + S+GGVSY+F  AYG GKA  DRL+ DMA ELK + I+S S+WPG+V TE + +   Q   K +     G+GY  E+P  AGRA+AAL  A+ P         LM R+G + IVAELA ++ + D DG +P S+RSL+FL+
Sbjct:    4 LKGKIALVTGATRGIGKGIAIGLGEAGATVYVTGRSLERSSDSEVS-----GSLRETQSAVEAAGGTCIPVRVDHSDDEQVRLLFDRIERERGQLDILVNNVFSGVRALKDA-YGQPFWKSEIDVWDAVNNVGLRSHYVTSVLAARLM--SQRQQG---LICTISSWGGVSYIFGAAYGAGKAACDRLAADMAEELKADNIASVSVWPGIVGTEHISNFAAQMDAK-DASATFGDGYNWESPLLAGRAIAAL--AAEPD--------LMSRTGKVCIVAELAEQHNLVDRDGKRPVSLRSLRFLL 286          
BLAST of NO18G00380 vs. NCBI_GenBank
Match: WP_041555538.1 (short-chain dehydrogenase [Nostoc sp. PCC 7524])

HSP 1 Score: 224.6 bits (571), Expect = 4.900e-55
Identity = 139/313 (44.41%), Postives = 190/313 (60.70%), Query Frame = 0
Query:   40 LQGKVALVTGASRGIGRGIAFELAAAGATVYATARSLGDKECTEASLGGTLTSLVEEVQATSLISGSVVPLSCDHGQDTQVEAVLNHIQ-EKEGKLHYLINNAFALPAAGVDGMV---GVSFWEQGTQVWDSVMNVGLRSHYVAACAAVPLMIATREKEGCTPAICNVGSFGGVSYVFNVAYGVGKAGVDRLSRDMAIELKKEGISSFSLWPGVVLTERM----EDMRRQDPEKWEKEMGVGEGY-LETPRFAGRALAALLSASLPSSSSPRPSLLMDRSGSIQIVAELARENGVKDVDGGQPPSIRSLQFLV 344
            L+GKVALVTGA+RGIG+GIA  L  AGATVY T R L     +  ++GG   SL E   A +   G  +P+  DH  D QV  +   IQ E+ G+L  L+NNA+     GV  +    G  FWE   ++WD+  NVGLRSHYVA+  A  +M  ++++ G    ICN+ S+GG+SY+F VAYG GKA  DRL+ DMA+ELK + I+  SLWPG+V TE +     +M  Q+P   ++   + E Y  ETP   GRA+A L  AS P+        ++ R+G +QIVAELA++  + D DG  P S+RSL+FL+
Sbjct:    4 LEGKVALVTGATRGIGKGIAIGLGEAGATVYITGRRLDSNSASSENVGG---SLSETQSAVTQAGGLCIPVQVDHSDDEQVRILFERIQDEQHGQLDLLVNNAY----GGVQALTAAQGKPFWESEPRLWDACNNVGLRSHYVASIFAARMM--SQQQRG---LICNISSWGGLSYIFGVAYGAGKAACDRLTADMAVELKPDNITVISLWPGIVGTEHISRLASEMEEQNPTD-QQNFVISERYNWETPLLTGRAIAKL--ASEPN--------VIRRTGRVQIVAELAKQYRLVDQDGNLPASLRSLRFLL 293          
BLAST of NO18G00380 vs. NCBI_GenBank
Match: EJK59445.1 (hypothetical protein THAOC_20333 [Thalassiosira oceanica])

HSP 1 Score: 222.2 bits (565), Expect = 2.400e-54
Identity = 136/314 (43.31%), Postives = 186/314 (59.24%), Query Frame = 0
Query:   43 KVALVTGASRGIGRGIAFELAAAGATVYA------TARSLGDKECTEASLGGTLTSLVEEVQATSLISGSVVPLSCDHGQDTQVEAVLNHIQEKEGKLHYLINNAFALPAAGVDGMVGVSFWEQGTQVWDSVMNVGLRSHYVAACAAVPLMIATREKEG-----CTPAICNVGSFGGVSYVFNVAYGVGKAGVDRLSRDMAIELKKEGISSFSLWPGVVLTERMEDMRRQDPEKWEKEMG---VGEGYLETPRFAGRALAALLSASLPSSSSPRPSLLMDRSGSIQIVAELARENGVKDVDGGQPPSIRSLQFL 343
            +VA+VTGASRGIGRGIA EL AAG  VY       T R+  D+      L  T+ S  EEV   S   G  +P  CD   D  +E VL+ + EKEG+L  L+ +AF  PA      +   FW QG Q+WD+V  +GLR  Y+   AA P +I T ++ G       P IC V SFGG SY FNVAYGVGKAG+DRLS DM+ +LK+  +++ +L+PG+V TE   +++  +   W++  G   + +G  E+P F+GRAL  L S S           +M RSG++++VAELA+E    D+DG +P SIRSL++L
Sbjct:    6 RVAVVTGASRGIGRGIALELGAAGYAVYCIGRSSRTGRAYDDQRAVADGLDLTVESAAEEV---SRKGGRGIPCPCDLSSDDDIERVLDEVYEKEGRLDVLVCSAFTTPA---KQSIRGEFWTQGMQMWDAVNGIGLRQVYMTCQAAAPKLIETAKRTGNDQSAPPPLICLVSSFGGKSYTFNVAYGVGKAGIDRLSTDMSYQLKRYNVATTTLYPGLVRTE--ANLQMVEDGTWDEASGNLDLDQG--ESPEFSGRALVRLASLSKDD--------MMSRSGNVEVVAELAKEFDFTDIDGSRPASIRSLKYL 301          
BLAST of NO18G00380 vs. NCBI_GenBank
Match: WP_019508079.1 (hypothetical protein [Pleurocapsa sp. PCC 7319])

HSP 1 Score: 221.5 bits (563), Expect = 4.100e-54
Identity = 129/305 (42.30%), Postives = 184/305 (60.33%), Query Frame = 0
Query:   40 LQGKVALVTGASRGIGRGIAFELAAAGATVYATARSLGDKECTEASLGGTLTSLVEEVQATSLISGSVVPLSCDHGQDTQVEAVLNHIQEKEGKLHYLINNAFALPAAGVDGMVGVSFWEQGTQVWDSVMNVGLRSHYVAACAAVPLMIATREKEGCTPAICNVGSFGGVSYVFNVAYGVGKAGVDRLSRDMAIELKKEGISSFSLWPGVVLTERMEDMRRQDPEKWEKEMGVGEGY-LETPRFAGRALAALLSASLPSSSSPRPSLLMDRSGSIQIVAELARENGVKDVDGGQPPSIRSLQFLV 344
            L+GKVALVTGASRG+G+GIA  L  AGATVY T RS  +K   E+++ GTL      V+A     G  +P+  DH +D Q+  +   IQ ++GKL  L+NN FA   A  D   G  FW     +WD+V NVGLRSHYV++  A  +M  ++  +G    IC + S+GG+SY+F  AYG GK+  DRL+ DMA+ELK   I+S ++WPG+V TE +     +  ++ +     G+GY  ETP   GRA+AAL +           S +M  +G ++IVAE+A +  + D DG +P S+RSL+F++
Sbjct:    4 LEGKVALVTGASRGLGKGIAIGLGEAGATVYITGRS-WEKSTAESNIAGTLQETQLAVEAA---GGICIPVQVDHSEDRQIRLLFERIQAEQGKLDLLVNNVFAGVRALRDA-YGKPFWHHEPSLWDAVNNVGLRSHYVSSIYAAKIM--SKSSQG---LICTISSWGGLSYIFGAAYGAGKSACDRLAADMAVELKSANIASVAIWPGIVGTENISAFAEEMDDE-QSRATFGDGYNWETPLLTGRAIAALAA----------ESDIMQHTGKVKIVAEMAEKYNLVDRDGNRPVSLRSLRFVL 287          
BLAST of NO18G00380 vs. NCBI_GenBank
Match: WP_035984861.1 (short-chain dehydrogenase [Leptolyngbya sp. KIOST-1])

HSP 1 Score: 221.5 bits (563), Expect = 4.100e-54
Identity = 138/322 (42.86%), Postives = 185/322 (57.45%), Query Frame = 0
Query:   36 LASPLQGKVALVTGASRGIGRGIAFELAAAGATVYATARSLGDKECTEASLGGTLTSLVEEVQATSLISGSVVPLSCDHGQDTQVEAVLNHI-QEKEGKLHYLINNAFALPAAGVDGMVGVSFWEQGTQVWDSVMNVGLRSHYVAACAAVPLMIATREKEGCTPAICNVGSFGGVSYVFNVAYGVGKAGVDRLSRDMAIELKKEGISSFSLWPGVVLTERMEDMRRQDPEKWEKEMGVG-------------EGYLETPRFAGRALAALLSASLPSSSSPRPSLLMDRSGSIQIVAELARENGVKDVDGGQPPSIRSLQFLV 344
            L  PL+G VALVTGA+RG+G+GIA  L  AGATVY T R       T A+    + SL E   A +   G  +P+  DHG D QV+A+   I  E+ G+L  L+NNA+A   + +    G  FWE     WD+  +VGLRSHYVA+     LM+  R        IC + S+GG+SY+F V YGVGKA  DR++ DMA+ELKK  ++S S+WPG+V TE M         ++  EMG+G             +   ETP   GRA+AAL       ++ P    ++ RSG +QIVAELARE GV D DG +P S+RSL+F++
Sbjct:    5 LEQPLRGTVALVTGATRGLGKGIAIGLGEAGATVYLTGR-------TTAATAEGVGSLEETAAAVTEAGGVALPVPVDHGDDAQVQALFERIDSEQAGRLDLLVNNAYA-GVSALKAAYGKPFWESEPDFWDACNSVGLRSHYVASVYGARLMVPRRR-----GLICTLSSWGGLSYIFGVPYGVGKAACDRMAADMAVELKKHRVTSLSIWPGIVGTELM--------TQFAAEMGLGGTAGGSAADSIQAQYNWETPLLTGRAIAAL-------AADPE---VLRRSGQVQIVAELAREYGVVDADGQRPASLRSLRFVL 295          
The following BLAST results are available for this feature:
BLAST of NO18G00380 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
CBN79894.18.600e-6847.06Short-chain dehydrogenase/reductase [Ectocarpus si... [more]
XP_002180072.18.900e-5743.99predicted protein, partial [Phaeodactylum tricornu... [more]
CEM02274.11.700e-5545.45unnamed protein product [Vitrella brassicaformis C... [more]
WP_096553519.11.700e-5543.99short-chain dehydrogenase [Nostoc sp. NIES-4103] >... [more]
AFY46675.14.900e-5544.41dehydrogenase of unknown specificity, short-chain ... [more]
WP_036484455.14.900e-5545.25KR domain-containing protein [Myxosarcina sp. GI1][more]
WP_041555538.14.900e-5544.41short-chain dehydrogenase [Nostoc sp. PCC 7524][more]
EJK59445.12.400e-5443.31hypothetical protein THAOC_20333 [Thalassiosira oc... [more]
WP_019508079.14.100e-5442.30hypothetical protein [Pleurocapsa sp. PCC 7319][more]
WP_035984861.14.100e-5442.86short-chain dehydrogenase [Leptolyngbya sp. KIOST-... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR050ncniR050Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR043ngnoR043Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO18G00380.3NO18G00380.3-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO18G00380.2NO18G00380.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO18G00380.1NO18G00380.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|605582gene_9812Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_101243g1gene7208Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO18G00380.3NO18G00380.3Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO18G00380.2NO18G00380.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO18G00380.1NO18G00380.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO18G00380 ID=NO18G00380|Name=NO18G00380|organism=Nannochloropsis oceanica|type=gene|length=3208bp
AGGCACCGATACGACGGCCTTACCTGTGAGCAATCATGCCCCCTCAACGT
CTCCTCATTGGTATTCCCATGTGCCTACTCCTTGTCCTCCTCCTTGCCCA
CCTGTCTTCGCATGTCGTCTCTGCCTTCCTGCACATGTCCCTAGCTTCCC
CATTGCAAGGAAAAGTTGCCTTGGTCACCGGGGCTTCGCGCGGCATCGGG
AGAGGGATAGCATTCGAACTTGCTGCTGCAGgtacatcatctgtcgccca
cacacataccctttctacctgttgtttcacttccatcgaacggcgtctcc
ctccctggtctgtccagggtagtccccttctttcatctttcctgccagtt
tctccctccctccgtcttcaatcagctcttgtttcctatttcattccttc
ttatttttctttcattcatttcccaccctcctccctcttgctgttgcttc
cctcccctccccccgtccccgtccaatctccccccaaacctccagGCGCG
ACGGTCTATGCGACAGCCCGCTCGCTGGGTGATAAGGAATGCACGGAGGg
tacgtcaactcatgggatggtccgatcgctgagatgcatctcaatccgtt
cctctgcctttttcacaactctcctctttttttccttgcacacgcagcta
tcccttcctcaccttccttccctcccccaccttccttccccctccttccc
tcctcacatagCCTCACTCGGAGGCACCCTCACCTCCCTCGTCGAAGAAG
TCCAAGCCACAAGTCTTATATCCGGCAGCGTCGTCCCCCTCTCGTGCGAT
CACGGCCAAGACACCCAAGTCGAGGCGGTCCTCAACCACATCCAGGAGAA
AGAGGGGAAATTGCATTACTTGATTAATAACGCCTTCGCCTTACCCGCTG
CAGGGGTAGACGGCATGGTTGGGGTGAGCTTCTGGGAGCAAGGCACGCAG
gtacatgcatgaatgagggtgacggacattttggggttaatccccgacac
ctccctcgcttgtgagaacgcctctcgatatttccctcccttcttccctc
cttccctccctccatccctagGTCTGGGACAGTGTAATGAACGTGGGCTT
ACGAAGCCACTACGTTGCTGCCTGCGCTGCGGTTCCCCTCATGATAGCGA
CAAGGGAAAAGgtaggtacatgcaggcctcttcccctttcttccttcctt
cccttcacccagtccctcctttccttcctccctccctccctcccttcttt
atgccgaatggtgtacactactcccgctcccctgatgcgtctccctcctc
cctccctcaccccctccacccctccctctctttcccttcctcgcccctcg
cagGAGGGCTGCACGCCTGCCATATGCAACGTGGGCAGTTTTGGGGGCGT
Ggtagggatcgaggggacgaggaggggagggagggaagggtgggcttgca
gatgacacgacggaagagggaagaaagaaagataaagcctctgactcaca
attgctcttcaaacagAGCTACGTCTTCAACGTCGCTTATGGCGTCGGAA
AGGCCGgtaagttcactcatccctccctcccgccctccctccctccctcc
catcccttcatcccatccactctctctccctctctccctccctccagGCG
TCGACCGTCTTTCACGCGACATGGCCATAGAGCTCAAAAAAGAAGGAATC
TCCTCCTTCTCCTTGTGGCCGGGGGTGGTACTGACGGAGAGGATGGAAGA
CATGAGACGACAAGACCCGGAGAAATGGGAAAAGGAGATGGGGGTGGGCG
AGGGgtaaggagggcgggaggcaggcaggggcgggaggcgagacaaagag
ggtgagatgattggcacgagcgtctgtccggtcggcgggtgtgcagttat
tcatctcacgcgtcatcttttatgagctcaccttcgttgtcttttccccc
tccctccctccctccctccctccctccctccctccctccctccgtaagGT
ATCTCGAAACACCCCGTTTCGCCGGGCGGGCCCTCGCGGCTCTGTTATCC
GCCTCTCTGCCTTCTTCTTCCTCCCCCCGACCCTCTCTGCTCATGGACCG
CAGTGGCTCCATCCAGATTGTGGCAGAGCTCGCGAGGGAGAACGGAGTGA
AGGACGTGGATGGGGGACAGCCACCCTCCATCCGATCCCTGCAGTTCTTG
GTATGCCCGTAGGGGGTGCAATGCCAAACCCATTCTTTCAACTCTTGACG
GTCTGCTTATTGGGCCTCTTATGTATGCAATCCTGTCTTTCGTATTTTAC
CTTATTTCCCTGCCGCTTTCAAATTACTCCGGTACTTTCTCTCTCGCCAA
TGTGTCGAACGTGACACCTTACCTCACCTTCCCCTCCCCTCTCTCACTCC
CCTTTCTTTTCCACTCACCAGCTTCCTAACTACGCCTTCAAAAACCTGTT
CGTCTTGGCACCTTTTCTACGTCCTCTTGTACCGGACTTCAAACTGCCCT
TATCCGTGATGGGCGCACGTCCGGCGGCATAAAATGAGTGCAGTGCCAAT
GGTGGGGGAAGGACTGTCGATGAAGGAACAGCGGAGATGAAGAATGGGAT
TCAAAAAAAGTATGTAATAGTGATGTTTGACCAATGAAGCTGTCGCTTTT
TGTTGAGAACCGGCAACACGTTGCTTTCGCGCTGCGTTTGCGAGTCGCCG
CCCACGGTTATGGGCAGTTGAAAAGAGTACGAGGTGGATGCAAGGGAGAG
AGCCACGCCCAGAATGGAGAAGAGCGTGGGCATGATGCTTGTTTTCTGCT
CCTGAACTTGGTGTCGCGGTGGTCTTCGGAAAGGGGGGGGATGGGGGGGT
CAATCAAAGAACTGGAAGGAGCGTAAACGTTTAGACGCGCTTCAGTGTAG
TTGTTCTTATTGTCACGCGGGGTGTGAGCGAGGCAACAGAAAATGAAGAG
CTTAAATACAAACACCCAAATATTGCACAAAAGGGCGCCACGGTATGCAG
TGTAGAGGTTTGTCGTGGGTCCGCTTCTCACATATACATAATAGCACGCC
AGATCTCGAGGGTTCAAGTGCAAAGTATGATTGATAAAAATCCTTCTTCA
CCCTTGCTCTCTCCCTACCTCTCTCCTTCCCTCTCTTCCCTCCTTTTCTA
CCTTCTCCAACACTATTCACAAACATTCCAAGCCCTGTCCCCCCTCCCTC
CCTCCCTC
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protein sequence of NO18G00380.3

>NO18G00380.3-protein ID=NO18G00380.3-protein|Name=NO18G00380.3|organism=Nannochloropsis oceanica|type=polypeptide|length=521bp
MPPQRLLIGIPMCLLLVLLLAHLSSHVVSAFLHMSLASPLQGKVALVTGA
SRGIGRGIAFELAAAGTSSVAHTHTLSTCCFTSIERRLPPWSVQGSPLLS
SFLPVSPSLRLQSALVSYFIPSYFSFIHFPPSSLLLLLPSPPPVPVQSPP
KPPGATVYATARSLGDKECTEGTSTHGMVRSLRCISIRSSAFFTTLLFFS
LHTQLSLPHLPSLPHLPSPSFPPHIASLGGTLTSLVEEVQATSLISGSVV
PLSCDHGQDTQVEAVLNHIQEKEGKLHYLINNAFALPAAGVDGMVGVSFW
EQGTQVWDSVMNVGLRSHYVAACAAVPLMIATREKEGCTPAICNVGSFGG
VSYVFNVAYGVGKAGVDRLSRDMAIELKKEGISSFSLWPGVVLTERMEDM
RRQDPEKWEKEMGVGEGYLETPRFAGRALAALLSASLPSSSSPRPSLLMD
RSGSIQIVAELARENGVKDVDGGQPPSIRSLQFLLPNYAFKNLFVLAPFL
RPLVPDFKLPLSVMGARPAA*
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protein sequence of NO18G00380.2

>NO18G00380.2-protein ID=NO18G00380.2-protein|Name=NO18G00380.2|organism=Nannochloropsis oceanica|type=polypeptide|length=346bp
MPPQRLLIGIPMCLLLVLLLAHLSSHVVSAFLHMSLASPLQGKVALVTGA
SRGIGRGIAFELAAAGATVYATARSLGDKECTEASLGGTLTSLVEEVQAT
SLISGSVVPLSCDHGQDTQVEAVLNHIQEKEGKLHYLINNAFALPAAGVD
GMVGVSFWEQGTQVWDSVMNVGLRSHYVAACAAVPLMIATREKEGCTPAI
CNVGSFGGVSYVFNVAYGVGKAGVDRLSRDMAIELKKEGISSFSLWPGVV
LTERMEDMRRQDPEKWEKEMGVGEGYLETPRFAGRALAALLSASLPSSSS
PRPSLLMDRSGSIQIVAELARENGVKDVDGGQPPSIRSLQFLVCP*
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protein sequence of NO18G00380.1

>NO18G00380.1-protein ID=NO18G00380.1-protein|Name=NO18G00380.1|organism=Nannochloropsis oceanica|type=polypeptide|length=379bp
MPPQRLLIGIPMCLLLVLLLAHLSSHVVSAFLHMSLASPLQGKVALVTGA
SRGIGRGIAFELAAAGATVYATARSLGDKECTEASLGGTLTSLVEEVQAT
SLISGSVVPLSCDHGQDTQVEAVLNHIQEKEGKLHYLINNAFALPAAGVD
GMVGVSFWEQGTQVWDSVMNVGLRSHYVAACAAVPLMIATREKEGCTPAI
CNVGSFGGVSYVFNVAYGVGKAGVDRLSRDMAIELKKEGISSFSLWPGVV
LTERMEDMRRQDPEKWEKEMGVGEGYLETPRFAGRALAALLSASLPSSSS
PRPSLLMDRSGSIQIVAELARENGVKDVDGGQPPSIRSLQFLLPNYAFKN
LFVLAPFLRPLVPDFKLPLSVMGARPAA*
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