NO18G00380, NO18G00380 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO18G00380 vs. NCBI_GenBank
Match: CBN79894.1 (Short-chain dehydrogenase/reductase [Ectocarpus siliculosus]) HSP 1 Score: 266.9 bits (681), Expect = 8.600e-68 Identity = 144/306 (47.06%), Postives = 205/306 (66.99%), Query Frame = 0 Query: 40 LQGKVALVTGASRGIGRGIAFELAAAGATVYATARSLGDKECTEASLGGTLTSLVEEVQATSLISGSVVPLSCDHGQDTQVEAVLNHIQEKEGKLHYLINNAFALPAAGVDGMVGVSFWEQGTQVWDSVMNVGLRSHYVAACAAVPLMIATREKEGCTPA-ICNVGSFGGVSYVFNVAYGVGKAGVDRLSRDMAIELKKEGISSFSLWPGVVLTERMEDMRRQDPEKWEKEMGVG-EGYLETPRFAGRALAALLSASLPSSSSPRPSLLMDRSGSIQIVAELARENGVKDVDGGQPPSIRSLQFLV 344 L+GKVA+VTG+SRGIG+GIA L G TVY T RS+G T+ +GG+L E++A G +P++CDH +D QV+A+ ++ ++G+L L+NNAFAL G + FW QG WDS++ VGLRSHY+A+C A PLMI + + G P I V SFGG++Y FNVAYGVGKAGVDRL++DMAIEL++E ++ S++PG+V TE+M+ + ++P ++E G+ +ETP F GRA+AAL ++ P ++ ++G +QIVAELA++ G DV G PPSIRSL+FL+ Sbjct: 87 LRGKVAVVTGSSRGIGKGIAVTLGQRGCTVYVTGRSVGG-NTTDKEIGGSLEETAAEIEAA---GGKGIPVACDHAKDEQVKALFERVESEQGRLDILVNNAFAL---GPGDQLQAKFWTQGADAWDSLITVGLRSHYMASCFAAPLMIKSVKDRGGKPGLIACVSSFGGLAYSFNVAYGVGKAGVDRLAKDMAIELEEEKVAVVSVYPGIVKTEKMKSLMTKNPAEFEANTGIALSSPMETPFFTGRAVAAL-------AADPE---ILKKTGKVQIVAELAKQYGFTDVGGDTPPSIRSLRFLL 375
BLAST of NO18G00380 vs. NCBI_GenBank
Match: XP_002180072.1 (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >EEC48263.1 predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 230.3 bits (586), Expect = 8.900e-57 Identity = 139/316 (43.99%), Postives = 193/316 (61.08%), Query Frame = 0 Query: 44 VALVTGASRGIGRGIAFELAAAGATVYATARSLGDKECT------------EASLGGTLTSLVEEVQATSLISGSVVPLSCDHGQDTQVEAVLNHIQEKEGKLHYLINNAFALPAAGVDGMVGVSFWEQGTQVWDSVMNVGLRSHYVAACAAVPLMIATR---EKEGCTPAICNVGSFGGVSYVFNVAYGVGKAGVDRLSRDMAIELKKEGISSFSLWPGVVLTER-MEDMRRQDPEKWEKEMGVGEGYLETPRFAGRALAALLSASLPSSSSPRPSLLMDRSGSIQIVAELARENGVKDVDGGQPPSIRSLQFLV 344 V LVTGASRGIG+GIA EL GA VY T S D + E+ GT+ +E+ G V + C+H D++V+ +++ I+ G+L LINNAF LP GV+ M+ FWEQG ++WD++ VGLRSH+VA+ A+PL+ A + ++ P + V SFGG++Y FNV YGVGKAGVDRL++DMA+EL E I S WPGVV TER E +++ D WEK +G+ ETP F G+A+ A +A+ PS+ M ++G+ Q+VAEL+ E DV+G +PPSIRSL+FL+ Sbjct: 1 VCLVTGASRGIGKGIALELGKQGAIVYITGTSTSDNSSSLNAATGPYSATKESGGPGTIEQTAQEIMNA---GGIGVAVLCNHAVDSEVKHLMDRIERDHGRLDILINNAFRLPQGGVE-MLYKKFWEQGPEIWDTLHTVGLRSHFVASVYAMPLLQAAKKNPQRNLPRPFVGMVSSFGGLTYTFNVPYGVGKAGVDRLAKDMAVELTPEDICVVSFWPGVVDTERTQESVKKGD---WEKYVGLPLDNAETPGFTGKAIIA--TATDPSN--------MRKTGTYQVVAELSEEYNFFDVNGNRPPSIRSLRFLL 299
BLAST of NO18G00380 vs. NCBI_GenBank
Match: CEM02274.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 226.1 bits (575), Expect = 1.700e-55 Identity = 140/308 (45.45%), Postives = 188/308 (61.04%), Query Frame = 0 Query: 39 PLQGKVALVTGASRGIGRGIAFELAAAGATVYATARSL-GDKECTEASLGGTLTSLVEEVQATSLISGSVVPLSCDHGQDTQVEAVLNHIQEKEGKLHYLINNAFALPAAGVDGMVGVSFWEQGTQVWDSVMNVGLRSHYVAACAAVPLMIATREKEGCTPAICNVGSFGGVSYVFNVAYGVGKAGVDRLSRDMAIELKKEGISSFSLWPGVVLTERM-EDMRRQDPEKWEKEMGVGEGYL-ETPRFAGRALAALLSASLPSSSSPRPSLLMDRSGSIQIVAELARENGVKDVDGGQPPSIRSLQFLV 344 PLQG A+VTGA+RGIGRGIA LA +GATVY T R+L G K+ TL SL E Q G + L CD D Q+E + ++ + G L L+NNAF +P D M G FW+ ++WD + VGLRSH+VA+ A PL++ +++G I NV S+GGV Y+F+V YG+GKAG+DR++ DMA ELK ++ SLWPG V TE + ++ DP GV + YL E+P ++GRA+AAL ASLP P + R+GS+Q+ AELA E D DG +PPS RSL+FL+ Sbjct: 42 PLQGLTAVVTGATRGIGRGIAIGLAESGATVYITGRTLKGGKD--------TLGSLEEVQQTIKDKGGECIALQCDSADDRQLEQLFKRVERENGGLDVLVNNAFTIPQPVSDWM-GKPFWQSPAKLWDVINGVGLRSHFVASALASPLLL---QRKG---LIVNVSSWGGVRYIFHVIYGIGKAGMDRMAADMAEELKPHNVTVVSLWPGKVRTENFYKLLQENDP----LTKGVLDPYLSESPLYSGRAVAAL--ASLP------PHKRLKRTGSVQVTAELASEFNFNDEDGTRPPSFRSLRFLL 322
BLAST of NO18G00380 vs. NCBI_GenBank
Match: WP_096553519.1 (short-chain dehydrogenase [Nostoc sp. NIES-4103] >BAZ49269.1 short-chain dehydrogenase/reductase SDR [Nostoc sp. NIES-4103]) HSP 1 Score: 226.1 bits (575), Expect = 1.700e-55 Identity = 139/316 (43.99%), Postives = 187/316 (59.18%), Query Frame = 0 Query: 40 LQGKVALVTGASRGIGRGIAFELAAAGATVYATARSLGDKECTEASLGGTLTSLVEEVQATSLISGSVVPLSCDHGQDTQVEAVLNHIQ-EKEGKLHYLINNAFALPAAGVDGMVGVS---FWEQGTQVWDSVMNVGLRSHYVAACAAVPLMIATREKEGCTPAICNVGSFGGVSYVFNVAYGVGKAGVDRLSRDMAIELKKEGISSFSLWPGVVLTE-------RMEDMRRQDPEKWEKEMGVGEGY-LETPRFAGRALAALLSASLPSSSSPRPSLLMDRSGSIQIVAELARENGVKDVDGGQPPSIRSLQFLV 344 L+GKV LVTGA+RGIGRGIA L AGATVY T RSL + ++ G SL E A G +P+ DH D QV + IQ E+ G+L L+NNA+ AGV + S FW+ +WD+ NVGLRSHYVA+ A +M T++K G IC + S+GG+SY+F AYG GKAG DRL+ DMA+ELK ++S SLWPG+V TE +M++ DP K + + + Y ETP GR +AAL AS P+ +M R+G + IVAELA++ + D DG +P S+RSL+F++ Sbjct: 4 LEGKVTLVTGATRGIGRGIAIGLGEAGATVYITGRSLNQSDASDRIFG----SLGETQSAVEAAGGVCIPVQVDHSDDEQVRLLFERIQDEQHGQLDLLVNNAY----AGVQALANASGQPFWDCNPSLWDACNNVGLRSHYVASVFAARMM--TKQKSG---LICTISSWGGLSYIFGTAYGAGKAGCDRLASDMAVELKPHNVASVSLWPGIVGTELFSEFASQMQEQNLTDP----KSLLISDRYNWETPLLTGRVIAAL--ASEPN--------IMGRTGRVHIVAELAKQYNLVDQDGSRPASLRSLRFVL 292
BLAST of NO18G00380 vs. NCBI_GenBank
Match: AFY46675.1 (dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein [Nostoc sp. PCC 7524]) HSP 1 Score: 224.6 bits (571), Expect = 4.900e-55 Identity = 139/313 (44.41%), Postives = 190/313 (60.70%), Query Frame = 0 Query: 40 LQGKVALVTGASRGIGRGIAFELAAAGATVYATARSLGDKECTEASLGGTLTSLVEEVQATSLISGSVVPLSCDHGQDTQVEAVLNHIQ-EKEGKLHYLINNAFALPAAGVDGMV---GVSFWEQGTQVWDSVMNVGLRSHYVAACAAVPLMIATREKEGCTPAICNVGSFGGVSYVFNVAYGVGKAGVDRLSRDMAIELKKEGISSFSLWPGVVLTERM----EDMRRQDPEKWEKEMGVGEGY-LETPRFAGRALAALLSASLPSSSSPRPSLLMDRSGSIQIVAELARENGVKDVDGGQPPSIRSLQFLV 344 L+GKVALVTGA+RGIG+GIA L AGATVY T R L + ++GG SL E A + G +P+ DH D QV + IQ E+ G+L L+NNA+ GV + G FWE ++WD+ NVGLRSHYVA+ A +M ++++ G ICN+ S+GG+SY+F VAYG GKA DRL+ DMA+ELK + I+ SLWPG+V TE + +M Q+P ++ + E Y ETP GRA+A L AS P+ ++ R+G +QIVAELA++ + D DG P S+RSL+FL+ Sbjct: 25 LEGKVALVTGATRGIGKGIAIGLGEAGATVYITGRRLDSNSASSENVGG---SLSETQSAVTQAGGLCIPVQVDHSDDEQVRILFERIQDEQHGQLDLLVNNAY----GGVQALTAAQGKPFWESEPRLWDACNNVGLRSHYVASIFAARMM--SQQQRG---LICNISSWGGLSYIFGVAYGAGKAACDRLTADMAVELKPDNITVISLWPGIVGTEHISRLASEMEEQNPTD-QQNFVISERYNWETPLLTGRAIAKL--ASEPN--------VIRRTGRVQIVAELAKQYRLVDQDGNLPASLRSLRFLL 314
BLAST of NO18G00380 vs. NCBI_GenBank
Match: WP_036484455.1 (KR domain-containing protein [Myxosarcina sp. GI1]) HSP 1 Score: 224.6 bits (571), Expect = 4.900e-55 Identity = 138/305 (45.25%), Postives = 184/305 (60.33%), Query Frame = 0 Query: 40 LQGKVALVTGASRGIGRGIAFELAAAGATVYATARSLGDKECTEASLGGTLTSLVEEVQATSLISGSVVPLSCDHGQDTQVEAVLNHIQEKEGKLHYLINNAFALPAAGVDGMVGVSFWEQGTQVWDSVMNVGLRSHYVAACAAVPLMIATREKEGCTPAICNVGSFGGVSYVFNVAYGVGKAGVDRLSRDMAIELKKEGISSFSLWPGVVLTERMEDMRRQDPEKWEKEMGVGEGY-LETPRFAGRALAALLSASLPSSSSPRPSLLMDRSGSIQIVAELARENGVKDVDGGQPPSIRSLQFLV 344 L+GK+ALVTGA+RGIG+GIA L AGATVY T RSL +E S SL E A G+ +P+ DH D QV + + I+ + G+L L+NN F+ A D G FW+ VWD+V NVGLRSHYV + A LM ++ ++G IC + S+GGVSY+F AYG GKA DRL+ DMA ELK + I+S S+WPG+V TE + + Q K + G+GY E+P AGRA+AAL A+ P LM R+G + IVAELA ++ + D DG +P S+RSL+FL+ Sbjct: 4 LKGKIALVTGATRGIGKGIAIGLGEAGATVYVTGRSLERSSDSEVS-----GSLRETQSAVEAAGGTCIPVRVDHSDDEQVRLLFDRIERERGQLDILVNNVFSGVRALKDA-YGQPFWKSEIDVWDAVNNVGLRSHYVTSVLAARLM--SQRQQG---LICTISSWGGVSYIFGAAYGAGKAACDRLAADMAEELKADNIASVSVWPGIVGTEHISNFAAQMDAK-DASATFGDGYNWESPLLAGRAIAAL--AAEPD--------LMSRTGKVCIVAELAEQHNLVDRDGKRPVSLRSLRFLL 286
BLAST of NO18G00380 vs. NCBI_GenBank
Match: WP_041555538.1 (short-chain dehydrogenase [Nostoc sp. PCC 7524]) HSP 1 Score: 224.6 bits (571), Expect = 4.900e-55 Identity = 139/313 (44.41%), Postives = 190/313 (60.70%), Query Frame = 0 Query: 40 LQGKVALVTGASRGIGRGIAFELAAAGATVYATARSLGDKECTEASLGGTLTSLVEEVQATSLISGSVVPLSCDHGQDTQVEAVLNHIQ-EKEGKLHYLINNAFALPAAGVDGMV---GVSFWEQGTQVWDSVMNVGLRSHYVAACAAVPLMIATREKEGCTPAICNVGSFGGVSYVFNVAYGVGKAGVDRLSRDMAIELKKEGISSFSLWPGVVLTERM----EDMRRQDPEKWEKEMGVGEGY-LETPRFAGRALAALLSASLPSSSSPRPSLLMDRSGSIQIVAELARENGVKDVDGGQPPSIRSLQFLV 344 L+GKVALVTGA+RGIG+GIA L AGATVY T R L + ++GG SL E A + G +P+ DH D QV + IQ E+ G+L L+NNA+ GV + G FWE ++WD+ NVGLRSHYVA+ A +M ++++ G ICN+ S+GG+SY+F VAYG GKA DRL+ DMA+ELK + I+ SLWPG+V TE + +M Q+P ++ + E Y ETP GRA+A L AS P+ ++ R+G +QIVAELA++ + D DG P S+RSL+FL+ Sbjct: 4 LEGKVALVTGATRGIGKGIAIGLGEAGATVYITGRRLDSNSASSENVGG---SLSETQSAVTQAGGLCIPVQVDHSDDEQVRILFERIQDEQHGQLDLLVNNAY----GGVQALTAAQGKPFWESEPRLWDACNNVGLRSHYVASIFAARMM--SQQQRG---LICNISSWGGLSYIFGVAYGAGKAACDRLTADMAVELKPDNITVISLWPGIVGTEHISRLASEMEEQNPTD-QQNFVISERYNWETPLLTGRAIAKL--ASEPN--------VIRRTGRVQIVAELAKQYRLVDQDGNLPASLRSLRFLL 293
BLAST of NO18G00380 vs. NCBI_GenBank
Match: EJK59445.1 (hypothetical protein THAOC_20333 [Thalassiosira oceanica]) HSP 1 Score: 222.2 bits (565), Expect = 2.400e-54 Identity = 136/314 (43.31%), Postives = 186/314 (59.24%), Query Frame = 0 Query: 43 KVALVTGASRGIGRGIAFELAAAGATVYA------TARSLGDKECTEASLGGTLTSLVEEVQATSLISGSVVPLSCDHGQDTQVEAVLNHIQEKEGKLHYLINNAFALPAAGVDGMVGVSFWEQGTQVWDSVMNVGLRSHYVAACAAVPLMIATREKEG-----CTPAICNVGSFGGVSYVFNVAYGVGKAGVDRLSRDMAIELKKEGISSFSLWPGVVLTERMEDMRRQDPEKWEKEMG---VGEGYLETPRFAGRALAALLSASLPSSSSPRPSLLMDRSGSIQIVAELARENGVKDVDGGQPPSIRSLQFL 343 +VA+VTGASRGIGRGIA EL AAG VY T R+ D+ L T+ S EEV S G +P CD D +E VL+ + EKEG+L L+ +AF PA + FW QG Q+WD+V +GLR Y+ AA P +I T ++ G P IC V SFGG SY FNVAYGVGKAG+DRLS DM+ +LK+ +++ +L+PG+V TE +++ + W++ G + +G E+P F+GRAL L S S +M RSG++++VAELA+E D+DG +P SIRSL++L Sbjct: 6 RVAVVTGASRGIGRGIALELGAAGYAVYCIGRSSRTGRAYDDQRAVADGLDLTVESAAEEV---SRKGGRGIPCPCDLSSDDDIERVLDEVYEKEGRLDVLVCSAFTTPA---KQSIRGEFWTQGMQMWDAVNGIGLRQVYMTCQAAAPKLIETAKRTGNDQSAPPPLICLVSSFGGKSYTFNVAYGVGKAGIDRLSTDMSYQLKRYNVATTTLYPGLVRTE--ANLQMVEDGTWDEASGNLDLDQG--ESPEFSGRALVRLASLSKDD--------MMSRSGNVEVVAELAKEFDFTDIDGSRPASIRSLKYL 301
BLAST of NO18G00380 vs. NCBI_GenBank
Match: WP_019508079.1 (hypothetical protein [Pleurocapsa sp. PCC 7319]) HSP 1 Score: 221.5 bits (563), Expect = 4.100e-54 Identity = 129/305 (42.30%), Postives = 184/305 (60.33%), Query Frame = 0 Query: 40 LQGKVALVTGASRGIGRGIAFELAAAGATVYATARSLGDKECTEASLGGTLTSLVEEVQATSLISGSVVPLSCDHGQDTQVEAVLNHIQEKEGKLHYLINNAFALPAAGVDGMVGVSFWEQGTQVWDSVMNVGLRSHYVAACAAVPLMIATREKEGCTPAICNVGSFGGVSYVFNVAYGVGKAGVDRLSRDMAIELKKEGISSFSLWPGVVLTERMEDMRRQDPEKWEKEMGVGEGY-LETPRFAGRALAALLSASLPSSSSPRPSLLMDRSGSIQIVAELARENGVKDVDGGQPPSIRSLQFLV 344 L+GKVALVTGASRG+G+GIA L AGATVY T RS +K E+++ GTL V+A G +P+ DH +D Q+ + IQ ++GKL L+NN FA A D G FW +WD+V NVGLRSHYV++ A +M ++ +G IC + S+GG+SY+F AYG GK+ DRL+ DMA+ELK I+S ++WPG+V TE + + ++ + G+GY ETP GRA+AAL + S +M +G ++IVAE+A + + D DG +P S+RSL+F++ Sbjct: 4 LEGKVALVTGASRGLGKGIAIGLGEAGATVYITGRS-WEKSTAESNIAGTLQETQLAVEAA---GGICIPVQVDHSEDRQIRLLFERIQAEQGKLDLLVNNVFAGVRALRDA-YGKPFWHHEPSLWDAVNNVGLRSHYVSSIYAAKIM--SKSSQG---LICTISSWGGLSYIFGAAYGAGKSACDRLAADMAVELKSANIASVAIWPGIVGTENISAFAEEMDDE-QSRATFGDGYNWETPLLTGRAIAALAA----------ESDIMQHTGKVKIVAEMAEKYNLVDRDGNRPVSLRSLRFVL 287
BLAST of NO18G00380 vs. NCBI_GenBank
Match: WP_035984861.1 (short-chain dehydrogenase [Leptolyngbya sp. KIOST-1]) HSP 1 Score: 221.5 bits (563), Expect = 4.100e-54 Identity = 138/322 (42.86%), Postives = 185/322 (57.45%), Query Frame = 0 Query: 36 LASPLQGKVALVTGASRGIGRGIAFELAAAGATVYATARSLGDKECTEASLGGTLTSLVEEVQATSLISGSVVPLSCDHGQDTQVEAVLNHI-QEKEGKLHYLINNAFALPAAGVDGMVGVSFWEQGTQVWDSVMNVGLRSHYVAACAAVPLMIATREKEGCTPAICNVGSFGGVSYVFNVAYGVGKAGVDRLSRDMAIELKKEGISSFSLWPGVVLTERMEDMRRQDPEKWEKEMGVG-------------EGYLETPRFAGRALAALLSASLPSSSSPRPSLLMDRSGSIQIVAELARENGVKDVDGGQPPSIRSLQFLV 344 L PL+G VALVTGA+RG+G+GIA L AGATVY T R T A+ + SL E A + G +P+ DHG D QV+A+ I E+ G+L L+NNA+A + + G FWE WD+ +VGLRSHYVA+ LM+ R IC + S+GG+SY+F V YGVGKA DR++ DMA+ELKK ++S S+WPG+V TE M ++ EMG+G + ETP GRA+AAL ++ P ++ RSG +QIVAELARE GV D DG +P S+RSL+F++ Sbjct: 5 LEQPLRGTVALVTGATRGLGKGIAIGLGEAGATVYLTGR-------TTAATAEGVGSLEETAAAVTEAGGVALPVPVDHGDDAQVQALFERIDSEQAGRLDLLVNNAYA-GVSALKAAYGKPFWESEPDFWDACNSVGLRSHYVASVYGARLMVPRRR-----GLICTLSSWGGLSYIFGVPYGVGKAACDRMAADMAVELKKHRVTSLSIWPGIVGTELM--------TQFAAEMGLGGTAGGSAADSIQAQYNWETPLLTGRAIAAL-------AADPE---VLRRSGQVQIVAELAREYGVVDADGQRPASLRSLRFVL 295 The following BLAST results are available for this feature:
BLAST of NO18G00380 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO18G00380 ID=NO18G00380|Name=NO18G00380|organism=Nannochloropsis oceanica|type=gene|length=3208bpback to top protein sequence of NO18G00380.3 >NO18G00380.3-protein ID=NO18G00380.3-protein|Name=NO18G00380.3|organism=Nannochloropsis oceanica|type=polypeptide|length=521bpback to top protein sequence of NO18G00380.2 >NO18G00380.2-protein ID=NO18G00380.2-protein|Name=NO18G00380.2|organism=Nannochloropsis oceanica|type=polypeptide|length=346bpback to top protein sequence of NO18G00380.1 >NO18G00380.1-protein ID=NO18G00380.1-protein|Name=NO18G00380.1|organism=Nannochloropsis oceanica|type=polypeptide|length=379bpback to top Synonyms
Publications
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