NO18G00350, NO18G00350 (gene) Nannochloropsis oceanica

Overview
NameNO18G00350
Unique NameNO18G00350
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1891
Alignment locationchr18:147697..149587 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr18genomechr18:147697..149587 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO18G00350 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR050ncniR050Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR043ngnoR043Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO18G00350.1NO18G00350.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO18G00350.1NO18G00350.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO18G00350 ID=NO18G00350|Name=NO18G00350|organism=Nannochloropsis oceanica|type=gene|length=1891bp
AGGGGCATCACGAAGGGCATGGAGGGAGGGAGGAGGCAAGAGAAGAAGGA
ATGCAGACAGTAGCAGTAGCTGTAGAATCCCATGGCGGTGAGCGGAAATC
TATTCAACTCTCCACTCCCTGATTCATTCCTTCCTTTCCCCTTCACTCCT
TCCCTCCCTCCCTCCCTCGGCCACCTCTCTCCCTCCTGTCTTAGCATGAG
CAACCCTCCGGACGAGCAGTACTTCCCTCCCCCAACCACCTCCTTCCCTC
CCTCTTGTTCCGCCTCCTGGGGGCGTGCCTCCTCCTTCATGTCGTTCAAG
CGGCCGTTGCCTGCTTCTTTCTCCCACGACAGTGAAGGGTGGGAGGAGGC
AGGAGGAGGAGGAGGAGGAGGAGGAGAAGGAGGAGGAGGAGGAAAGGGGG
AAAATGGCGTGGACACATTTCTTTCCATTCCTCCCTTGTCTTCGACGGAG
TCAGCAGTTTTCTGGACCAAGCAGGCGCATATGGCAGCAGTCGCCGCAGC
CTCAGCATCGGTGTCAAAAGGAGGGGGAGGAGGAAGAGGAGGGAGGAGAG
GAGGAAACAAAGGGGGAAGAGGTGGTGGTGGAGGAGGGGAGAGAGTGAAT
GAAGAGTCGCATCAAGACCAGGGCATGGGCAGATCGAGGAGTCAGgtagg
aagggtgggagggagggagagacagctggatggaagaagggtggaaagcg
gtgtcggctgagaagacgcgccttggtgacttgacttctcctcacctccc
ttcatccttgctctccctctttccctctcttcctacccacagCATAACCC
GTCGCGAAGCAGCAGCCCACTACCGGTGTCCGCGTCTTGCCCCCCGCTAT
TCTTTCTCCCGTCCTCCCTCCCTCTTAATCACCAGCATCAGCAACAGCAC
GATCAGCAACAGCCGCAGCAGCATCACCTCGCCGCCTCAGAACgtaggtc
gaaataagatggaggaatggagggagggacggaggaagggacggagggag
ggcttgcatcttcttgtgcgttgacttcctctcattctatgtctctccca
gcaatggctaatactcgctccctctctccctctctccctctctccctccc
tccctccctaactagCGCCTCTGGCCGTCTCCATCAAGCCAACCTGCAGC
TCCCCCAACCGGAGCATCGGTCGCGCTAGCCCCTCCTTCCCTTCTCCATA
CCCCGGGTCCCACTTTCAGCAGCAGCAGCAGCAGTACGACAAACATCTCT
CTCATCAGCAGCATCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAA
CAACAACAACAACAACAACAACAACAGCAGCAGCAGCAACAGCAGCAGCA
GCAGCAGCAGCTACTACTACTACAGCAGCAGCAGCGGCAACAACAACAAC
AACAACAGCAGCAGCAGCAACAGCAGCAGCAGCAGCTACTAATACTACAG
CAGCAGCAGCAGCAGCAGCAAGTCAAAACGCACTTTGCCCATCCTCCCTC
TCATCTTCCCCTTCCCCCTCCTCCCTCCTCCTCCTCCTCCTCCTCCTCCT
CCTCCTCCTCCTCCTCCTCCTTCTCTTCTTCCTCTTCGTCTTCGACCTCT
GCGATCCCTCATGAGCGCCAACAGCGTCCGCAACAACAACCACAACAACA
ACAAGAACAACAACAGCAACAACAACATCAACAACAACAACAGCAGCAGC
AGCAACAACAACAACAACAACAACCACATTACCGTCAGCAGCAGCAGCAG
CAGCAGCAGCAGCCATTCACCTCTTCTTCCTCCTTTGCAGGCGGCCCTCC
CCTCCGCTCCTCCCTCCATCCCTTCCGGTCCCCCCCCCCCCCCAAAAGCA
GCAGCAACAGCCACAGCAACAGCAAACAGCAAAACCTTTAA
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protein sequence of NO18G00350.1

>NO18G00350.1-protein ID=NO18G00350.1-protein|Name=NO18G00350.1|organism=Nannochloropsis oceanica|type=polypeptide|length=497bp
MAVSGNLFNSPLPDSFLPFPFTPSLPPSLGHLSPSCLSMSNPPDEQYFPP
PTTSFPPSCSASWGRASSFMSFKRPLPASFSHDSEGWEEAGGGGGGGGEG
GGGGKGENGVDTFLSIPPLSSTESAVFWTKQAHMAAVAAASASVSKGGGG
GRGGRRGGNKGGRGGGGGGERVNEESHQDQGMGRSRSQHNPSRSSSPLPV
SASCPPLFFLPSSLPLNHQHQQQHDQQQPQQHHLAASEPPLAVSIKPTCS
SPNRSIGRASPSFPSPYPGSHFQQQQQQYDKHLSHQQHQQQQQQQQQQQQ
QQQQQQQQQQQQQQQQQQQQLLLLQQQQRQQQQQQQQQQQQQQQQLLILQ
QQQQQQQVKTHFAHPPSHLPLPPPPSSSSSSSSSSSSSSSFSSSSSSSTS
AIPHERQQRPQQQPQQQQEQQQQQQHQQQQQQQQQQQQQQQPHYRQQQQQ
QQQQPFTSSSSFAGGPPLRSSLHPFRSPPPPKSSSNSHSNSKQQNL*
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Synonyms
Publications