NO18G00220, NO18G00220 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO18G00220 vs. NCBI_GenBank
Match: EWC48352.1 (hypothetical protein DRE_02121 [Drechslerella stenobrocha 248]) HSP 1 Score: 76.3 bits (186), Expect = 8.100e-11 Identity = 46/129 (35.66%), Postives = 68/129 (52.71%), Query Frame = 0 Query: 5 LPVLWRVQVLGGDAVCLLMRRLFPHE--IAAGKVVVTHIDKD--NVEQSRISEILTDPTFYNHLLGDTWLF-FQLDSLICSKQRILLQTFLNRDYGWWGAPWNFWGRVPRICGNGGFSLRKKQFVNTIL 129 +P W LG + + R P + GK+ + I +D Q +S++ T+P FY L WLF FQLDS+IC+ R+ L ++ + Y W GAPWN G + GNGGFSLR+ ++ +L Sbjct: 97 VPPDWPFLFLGSNKSITHLTRSAPIRTYMKIGKLDMRLIPEDMPMTNQEEVSKVFTNPEFYKLFLPAEWLFVFQLDSMICANSRVSLDDWVEKGYTWVGAPWNAKGGLGG--GNGGFSLRRMSYLIRLL 223
BLAST of NO18G00220 vs. NCBI_GenBank
Match: EPS40722.1 (hypothetical protein H072_5411 [Dactylellina haptotyla CBS 200.50]) HSP 1 Score: 70.9 bits (172), Expect = 3.400e-9 Identity = 34/83 (40.96%), Postives = 49/83 (59.04%), Query Frame = 0 Query: 48 QSRISEILTDPTFYNHLLGDTWLF-FQLDSLICSKQRILLQTFLNRDYGWWGAPWNFWGRVPRICGNGGFSLRKKQFVNTILS 130 Q +S+ +T+ FY+ LL WLF FQ DS+IC+ + L ++ +DY W GA WG + GNGGFSLR+ + +LS Sbjct: 130 QEELSKTMTNAWFYSQLLPAEWLFIFQTDSIICANSNVTLNDWIEKDYSWVGAS---WGENTKYGGNGGFSLRRISHLLRVLS 209
BLAST of NO18G00220 vs. NCBI_GenBank
Match: PTB75768.1 (hypothetical protein M440DRAFT_1422876 [Trichoderma longibrachiatum ATCC 18648]) HSP 1 Score: 68.6 bits (166), Expect = 1.700e-8 Identity = 48/131 (36.64%), Postives = 67/131 (51.15%), Query Frame = 0 Query: 5 LPVLWRVQVLGGDAVCLLMRR--LFPHEIAAGKVVVTHIDKDNVE---QSRISEILTDPTFYNHLL--GDTWLFFQLDSLICSKQRILLQTFLNRDYGWWGAPWNFWGRVPRICGNGGFSLRKKQFVNTIL 129 +P W + +G + R H +AAGK+ +THI DN+ Q IS+ LT Y +L + L FQ DS++C+ R+ L FL +Y W GAPWN GR GNGG SLR+ + +L Sbjct: 98 VPPDWHFRFMGSPQSVASINRSVAIRHHVAAGKLQLTHI-PDNMSTNGQEEISQFLTTLWLYEAVLRPAEWLLVFQTDSMLCANSRLNLNDFL--EYDWVGAPWNPEGRWG---GNGGLSLRRVSRIIDVL 222
BLAST of NO18G00220 vs. NCBI_GenBank
Match: KFY78837.1 (hypothetical protein V499_02082 [Pseudogymnoascus sp. VKM F-103]) HSP 1 Score: 67.8 bits (164), Expect = 2.900e-8 Identity = 47/126 (37.30%), Postives = 67/126 (53.17%), Query Frame = 0 Query: 2 IMNLPVLWRVQVLGGDAVCLLMRRLF--PHEIAAGKVVVTHIDK----DNVEQSRISEILTDPTFYNHLLGDT-W-LFFQLDSLICSKQRILLQTFLNRDYGWWGAPWNFWGRVPRICGNGGFSLR 120 I LP W V+++G ++ + + H IA+ K+ + + D+ E IS+ LT+ TFY+ L W LFFQ DS+ICS + ++ + Y W GAPWN G VP GNGG SLR Sbjct: 122 IATLPPAWVVKLVGSQEAFAVVHKSYSLKHHIASKKLQLQELPSYYPVDSSES--ISQTLTNVTFYSEFLAPAEWALFFQTDSIICSASEQNIDDWVAKGYDWTGAPWN--GDVPG--GNGGLSLR 241
BLAST of NO18G00220 vs. NCBI_GenBank
Match: XP_007296151.1 (hypothetical protein MBM_08262 [Marssonina brunnea f. sp. 'multigermtubi' MB_m1] >EKD13544.1 hypothetical protein MBM_08262 [Marssonina brunnea f. sp. 'multigermtubi' MB_m1]) HSP 1 Score: 67.4 bits (163), Expect = 3.800e-8 Identity = 48/130 (36.92%), Postives = 71/130 (54.62%), Query Frame = 0 Query: 5 LPVLWRVQVLGG-DAVCLL-MRRLFPHEIAAGKVVVTHIDKDNV--EQSRISEILTDPTFYNHLL--GDTWLFFQLDSLICSKQRILLQTFLNRDYGWWGAPWNFWGRVPRICGNGGFSLRKKQFVNTIL 129 +P WR +V+G +++ LL R +++A+GK+ +T+I + Q IS LT Y +L + L FQ DS++C+ R L ++L DY W GAPWN G R GNGG SLRK + +L Sbjct: 106 VPPDWRFRVMGSLESIELLNSSRAIRNQVASGKLDLTYIPANMTTGSQEEISRFLTTLWLYETVLQPAEWLLVFQTDSMLCANSRQSLNSWL--DYDWVGAPWNPNG---RFGGNGGLSLRKVSAIIDVL 230
BLAST of NO18G00220 vs. NCBI_GenBank
Match: XP_024749661.1 (hypothetical protein BBK36DRAFT_1168950 [Trichoderma citrinoviride] >PTB66341.1 hypothetical protein BBK36DRAFT_1168950 [Trichoderma citrinoviride]) HSP 1 Score: 66.2 bits (160), Expect = 8.400e-8 Identity = 45/130 (34.62%), Postives = 66/130 (50.77%), Query Frame = 0 Query: 5 LPVLWRVQVLGGDAVCLLMRR--LFPHEIAAGKVVVTHIDKD--NVEQSRISEILTDPTFYNHLL--GDTWLFFQLDSLICSKQRILLQTFLNRDYGWWGAPWNFWGRVPRICGNGGFSLRKKQFVNTIL 129 +P WR + +G + R H +A GK+ +T+I ++ Q IS+ LT Y +L + L FQ DS++C+ R+ L FL +Y W GAPWN V R GNGG SLR+ + +L Sbjct: 72 VPPDWRFRFMGSPQSVASINRSVAIRHHVAGGKLDLTYIPENLSTNGQEEISQFLTTLWLYEVVLRPAEWLLVFQTDSMLCANSRLNLNDFL--EYDWVGAPWN---PVGRWGGNGGLSLRRVSRIIDVL 196
BLAST of NO18G00220 vs. NCBI_GenBank
Match: XP_024549221.1 (hypothetical protein BCIN_06g03020 [Botrytis cinerea B05.10] >CCD48049.1 hypothetical protein BofuT4_P110620.1 [Botrytis cinerea T4] >ATZ50823.1 hypothetical protein BCIN_06g03020 [Botrytis cinerea B05.10]) HSP 1 Score: 65.5 bits (158), Expect = 1.400e-7 Identity = 44/122 (36.07%), Postives = 63/122 (51.64%), Query Frame = 0 Query: 5 LPVLWRVQVLG---GDAVCLLMRRLFPHEIAAGKVVVTHIDKDNV--EQSRISEILTDPTFYNHLLGDT-W-LFFQLDSLICSKQRILLQTFLNRDYGWWGAPWNFWGRVPRICGNGGFSLR 120 LP W + +G +A+ L H + GK+V+T + + +Q IS LTD TFY L W L FQ DS+IC+ ++ ++++DY W GAPWN + GNGG SLR Sbjct: 131 LPAPWVFRFVGTPEANALISSSSSLSGH-VKTGKLVITELPEKYAIKDQETISMTLTDLTFYRDFLAPAEWVLMFQSDSMICASSEYNIEDWISKDYSWVGAPWNMAVK----GGNGGLSLR 247
BLAST of NO18G00220 vs. NCBI_GenBank
Match: EMR88557.1 (hypothetical protein BcDW1_2895 [Botrytis cinerea BcDW1]) HSP 1 Score: 65.5 bits (158), Expect = 1.400e-7 Identity = 44/122 (36.07%), Postives = 63/122 (51.64%), Query Frame = 0 Query: 5 LPVLWRVQVLG---GDAVCLLMRRLFPHEIAAGKVVVTHIDKDNV--EQSRISEILTDPTFYNHLLGDT-W-LFFQLDSLICSKQRILLQTFLNRDYGWWGAPWNFWGRVPRICGNGGFSLR 120 LP W + +G +A+ L H + GK+V+T + + +Q IS LTD TFY L W L FQ DS+IC+ ++ ++++DY W GAPWN + GNGG SLR Sbjct: 101 LPAPWVFRFVGTPEANALISSSSSLSGH-VKTGKLVITELPEKYAIKDQETISMTLTDLTFYRDFLAPAEWVLMFQSDSMICASSEYNIEDWISKDYSWVGAPWNMAVK----GGNGGLSLR 217
BLAST of NO18G00220 vs. NCBI_GenBank
Match: XP_013949787.1 (hypothetical protein TRIVIDRAFT_164366 [Trichoderma virens Gv29-8] >EHK15589.1 hypothetical protein TRIVIDRAFT_164366 [Trichoderma virens Gv29-8]) HSP 1 Score: 65.1 bits (157), Expect = 1.900e-7 Identity = 47/133 (35.34%), Postives = 67/133 (50.38%), Query Frame = 0 Query: 5 LPVLWRVQVLGGDAVCLLMRR--LFPHEIAAGKVVVTHIDKD--NVEQSRISEILTDPTFYNHLL--GDTWLFFQLDSLICSKQRILLQTFLNRDYGWWGAPWN---FWGRVPRICGNGGFSLRKKQFVNTIL 129 +P WR + +G + R H++AAGK+ +T I ++ Q IS+ LT Y +L + L FQ DS++C+ R+ L FL +Y W GAPWN WG GNGG SLR+ + IL Sbjct: 8 VPPDWRFRFMGSPLSVASINRSVAIRHQVAAGKLDLTFIPENMSTGGQEEISQFLTTLWLYEVVLQPAEWLLVFQTDSMLCANSRLNLNDFL--EYDWVGAPWNPDGQWG------GNGGLSLRRVSRIIDIL 132
BLAST of NO18G00220 vs. NCBI_GenBank
Match: KFZ02000.1 (hypothetical protein V500_00510 [Pseudogymnoascus sp. VKM F-4518 (FW-2643)]) HSP 1 Score: 65.1 bits (157), Expect = 1.900e-7 Identity = 46/126 (36.51%), Postives = 66/126 (52.38%), Query Frame = 0 Query: 2 IMNLPVLWRVQVLGGDAVCLLMRR--LFPHEIAAGKVVVTHIDK----DNVEQSRISEILTDPTFYNHLLGDT-W-LFFQLDSLICSKQRILLQTFLNRDYGWWGAPWNFWGRVPRICGNGGFSLR 120 + LP W V+++G ++R+ IA+ K+ + + D+ E IS+ LT+ TFY+ L W LFFQ DS+ICS + ++ + Y W GAPWN G VP GNGG SLR Sbjct: 121 VATLPPAWVVKLVGSQEAFAVVRKSHSLKQHIASKKLQLQELPSYYPVDSSES--ISQTLTNVTFYSEFLAPAEWALFFQTDSIICSASEQNIDDWVAKGYDWTGAPWN--GDVPG--GNGGLSLR 240 The following BLAST results are available for this feature:
BLAST of NO18G00220 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO18G00220 ID=NO18G00220|Name=NO18G00220|organism=Nannochloropsis oceanica|type=gene|length=643bpback to top protein sequence of NO18G00220.1 >NO18G00220.1-protein ID=NO18G00220.1-protein|Name=NO18G00220.1|organism=Nannochloropsis oceanica|type=polypeptide|length=131bpback to top Synonyms
Publications
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